Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_H24
         (874 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   2.1  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    23   2.8  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    23   2.8  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    23   2.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.7  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   4.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   4.9  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   8.5  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 199 NEALKWLLLWKARCPSLPSGIESTLILLQVHIQDLNSP 312
           N  LKWL+ W  +   LPS  + +L+ +  H    ++P
Sbjct: 280 NNNLKWLVNWGEQWGFLPS--KDSLVFVDNHDTQRDNP 315


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -1

Query: 550 TLANQAQIALHL*AVTMKADYYCGQCHVSIPLSNLEY 440
           TL +    AL   +     D Y G C V +  S LEY
Sbjct: 265 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEY 301


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -1

Query: 550 TLANQAQIALHL*AVTMKADYYCGQCHVSIPLSNLEY 440
           TL +    AL   +     D Y G C V +  S LEY
Sbjct: 265 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEY 301


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -1

Query: 550 TLANQAQIALHL*AVTMKADYYCGQCHVSIPLSNLEY 440
           TL +    AL   +     D Y G C V +  S LEY
Sbjct: 204 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEY 240


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = +1

Query: 151 EWLKVMNLIYSENSDENEALKWLLLWK 231
           +WL+V+ L  + + + ++   W + WK
Sbjct: 653 KWLQVLALWLNHSPNYDQVTNWYMGWK 679


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 157 AIPLYLPRVPQHNYSFLRKL 98
           A+ LY P VP+++ S + +L
Sbjct: 267 ALQLYYPHVPEYSSSIIMEL 286


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 157 AIPLYLPRVPQHNYSFLRKL 98
           A+ LY P VP+++ S + +L
Sbjct: 282 ALQLYYPHVPEYSSSIIMEL 301


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 856 YFLIKITMIVHLSINVEIXLVEDCLAE 776
           +FLI +  I  L I + + +  D LAE
Sbjct: 213 FFLIPMVFIAVLYIRIGLRIQSDSLAE 239


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,355
Number of Sequences: 438
Number of extensions: 4464
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)