Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_H24
(874 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g12220.1 68418.m01434 las1-like family protein similar to Las... 105 3e-23
At5g37450.1 68418.m04507 leucine-rich repeat transmembrane prote... 30 2.3
At3g43550.1 68416.m04626 GDSL-motif lipase, putative similar to ... 30 2.3
At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) / beta-fruc... 29 3.1
At5g66460.1 68418.m08381 (1-4)-beta-mannan endohydrolase, putati... 29 5.4
At5g56970.1 68418.m07111 FAD-binding domain-containing protein /... 29 5.4
At5g17490.1 68418.m02052 gibberellin response modulator, putativ... 29 5.4
At4g13670.1 68417.m02125 peptidoglycan-binding domain-containing... 29 5.4
At3g43570.1 68416.m04631 GDSL-motif lipase, putative similar to ... 28 7.1
At3g62280.1 68416.m06997 GDSL-motif lipase/hydrolase family prot... 28 9.4
>At5g12220.1 68418.m01434 las1-like family protein similar to Las1p
[Saccharomyces cerevisiae] GI:495504; contains Pfam
profile PF04031: Las1-like
Length = 611
Score = 105 bits (253), Expect = 3e-23
Identities = 56/168 (33%), Positives = 102/168 (60%), Gaps = 8/168 (4%)
Frame = +1
Query: 121 CVVVPWVNTEEWLKVMNLIYSENSDE-NEALKWLLLWKARCPSLPSGIESTLILLQVHIQ 297
C VPW++ EEW V ++S + D AL+ + W++R SLP+ ++ T L+++ ++
Sbjct: 28 CKQVPWLSWEEWDSVRESLFSSSPDRIASALERVATWRSR-GSLPAPVDVTCSLIEIQLK 86
Query: 298 D------LNSPDDNGNDHVLRLAYSSAIMRFINHMLDVSITKEN-TLSKAAKNVGIPDWI 456
D S D ++H+L++ Y I+R +N +++ + +E+ +++ AA+ +GIP +
Sbjct: 87 DGFIPREKQSADALYSEHLLQMLYCMGILRLVNCVIEKTRRREDVSIADAARAIGIPRKL 146
Query: 457 VELRHDTAHNNNLPSLSLLRDATQFGLDWLKSNYWKEHKLLITDYKSG 600
++LRH+ +H LP+LS+LRDA L+WLKS YW++ K I + G
Sbjct: 147 IDLRHEGSHRE-LPALSVLRDAADEALEWLKSYYWEQQKYQIPLKRDG 193
>At5g37450.1 68418.m04507 leucine-rich repeat transmembrane protein
kinase, putative
Length = 935
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -3
Query: 749 SFMIESRISTSTMSAKVLILHSELEQILNEMQKFTNIITLVSSWLSVSCLPD 594
S + I+ T + + +H +L+ LN +Q + S+W V C+PD
Sbjct: 20 SLLDAQEITHPTDVSALQYVHRKLKDPLNHLQDWKKTDPCASNWTGVICIPD 71
>At3g43550.1 68416.m04626 GDSL-motif lipase, putative similar to
family II lipase EXL3 (GI:15054386), EXL1 (GI:15054382),
EXL2 (GI:15054384) [Arabidopsis thaliana]; contains Pfam
profile PF00657: Lipase/Acylhydrolase with GDSL-like
motif
Length = 349
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 391 VSITKENTLSKAAKNVGIPDWIV--ELRHDTAHNNNLPSL 504
V I E K KNV IP IV + DT +NNNLP+L
Sbjct: 11 VLIAVETYAVKQGKNVTIPALIVFGDSIMDTGNNNNLPTL 50
>At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) /
beta-fructofuranosidase / invertase, vacuolar identical
to beta-fructosidase GB:CAA67560 GI:1429209 [Arabidopsis
thaliana]; supported by full-length cDNA GI:14517549;
identical to cDNA Beta-fructosidase GI:3115854
Length = 648
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 94 SIIFLKMSNCVVVPWVNTEEWLKVMNLIYSENSDENEALKWL 219
S FL + V++ +T+E+++V NL Y E+ + LKW+
Sbjct: 182 SATFLDDGSIVMLYTGSTDEFVQVQNLAYPEDPSDPLLLKWV 223
>At5g66460.1 68418.m08381 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872; contains Pfam profile PF00150:
Cellulase (glycosyl hydrolase family 5)
Length = 431
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 193 DENEALKWLLLWKARCPSLPSG--IESTLILLQVHIQDLN 306
D+ + W L+ + RCPS PSG I++ + + H++ L+
Sbjct: 191 DDPTIMAWELMNEPRCPSDPSGRAIQAWITEMAAHVKSLD 230
>At5g56970.1 68418.m07111 FAD-binding domain-containing protein /
cytokinin oxidase family protein similar to cytokinin
oxidase from Zea mays [gi:3882018] [gi:3341978]
Length = 523
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 361 SQMNMPNEAHDHFHYHRGYSSLEYGLAVILK 269
SQ++ P A H H HRG +S + G+ V ++
Sbjct: 92 SQLSFPLAARGHGHSHRGQASAKDGVVVNMR 122
>At5g17490.1 68418.m02052 gibberellin response modulator, putative /
gibberellin-responsive modulator, putative putative
member of the VHIID domain transcription factor family
RGAL - Arabidopsis thaliana, EMBL:AJ224957
Length = 523
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +1
Query: 91 YSIIFLKMSNCVVVPW---VNTEEWL--KVMNLIYSENSDENEALKWLLLWKARCPS 246
YS +F + + VV+P V +E +L +++NL+ +E SD E + L W+ R S
Sbjct: 406 YSSLFDSLEDGVVIPSQDRVMSEVYLGRQILNLVATEGSDRIERHETLAQWRKRMGS 462
>At4g13670.1 68417.m02125 peptidoglycan-binding domain-containing
protein similar to spore cortex-lytic enzyme prepeptide
(GI:1644192) [Bacillus cereus]; contains Pfam PF01471:
Putative peptidoglycan binding domain; contains Pfam
PF00684 : DnaJ central domain (4 repeats)
Length = 387
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = -3
Query: 773 LSPIKSLASFMIE-SRISTSTMSAKVLILHSELEQILNEMQKFTNIITLVSSWLSVS 606
+S I +L + E +RIS S +SA ++L S EQI+ E+++ + + + VS
Sbjct: 111 ISNIAALLQVLKEKNRISESGLSATPMVLESTREQIVEEVEEEEKRVIIAEEKVRVS 167
>At3g43570.1 68416.m04631 GDSL-motif lipase, putative similar to
family II lipases EXL3 GI:15054386, EXL1 GI:15054382,
EXL2 GI:15054384 from [Arabidopsis thaliana]; contains
Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase
Length = 320
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 391 VSITKENTLSKAAKNVGIPDWIV--ELRHDTAHNNNLPSL 504
V I E K KN IP IV + DT +NNNLP+L
Sbjct: 11 VLIVVEANAVKQGKNATIPALIVFGDSIMDTGNNNNLPTL 50
>At3g62280.1 68416.m06997 GDSL-motif lipase/hydrolase family protein
similar to Enod8.1 [Medicago truncatula] GI:18390045;
contains InterPro Entry IPR001087 Lipolytic enzyme,
G-D-S-L family
Length = 343
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +1
Query: 655 CISLSICSNSECKIKTLADIVDVDMRDSIINDARDLIGDNIQLSNLRQVLFQH 813
C+SL +CSNSE K+ + ++ DS + L G + + + F H
Sbjct: 16 CLSLLVCSNSETSYKSNKKPILINFGDSNSDTGGVLAGVGLPIGLPHGITFFH 68
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,236,566
Number of Sequences: 28952
Number of extensions: 338413
Number of successful extensions: 820
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2048424000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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