Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_H23
         (886 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   3.1  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    25   4.1  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   7.1  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -2

Query: 579 VQRARAADERQCEQEDAGVRCSHEPPVAPEPVSPR 475
           +Q  R       EQ   G + +  PP AP PV PR
Sbjct: 22  IQGIRGDKGEMGEQGRTGAQGNAGPPGAPGPVGPR 56


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -2

Query: 498 APEPVSPREHFPLARHAPRRHRTMSCRSHSRVPNSR 391
           APEPV+  + FP      R  R  S RS  R    R
Sbjct: 53  APEPVTEDDLFPEEMVKRRTSRLQSLRSSFRTDRDR 88


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
 Frame = -2

Query: 591 VEREVQRARAADERQCE--QEDAGVRCSHEPPVAPEPVSPREHFPLARHAPRRHRTMSCR 418
           V +E  R R  + R  E  +E AG   +   P A E    R   P  RH  RR+ T +  
Sbjct: 296 VIKEAIRVRQQELRGPEAVREAAGRLRTGPVPGAAERHRRRRPPPRRRHDRRRYPTNAGH 355

Query: 417 SHSRVPNSRFSLSQDFPFD 361
                P   + +  D  FD
Sbjct: 356 KVMNAPKEYYPVGYDKNFD 374


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,977
Number of Sequences: 2352
Number of extensions: 12871
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)