Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_H23
         (886 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032657-2|CAA21738.1|  368|Caenorhabditis elegans Hypothetical ...    62   7e-10
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>AL032657-2|CAA21738.1|  368|Caenorhabditis elegans Hypothetical
           protein Y47H9C.2 protein.
          Length = 368

 Score = 61.7 bits (143), Expect = 7e-10
 Identities = 29/69 (42%), Positives = 42/69 (60%)
 Frame = +1

Query: 457 RKWEVFAGRNRFWCDGRLMTAPHPGVFLLTLALICGTCALHFAFDCPFLAVRVSAAVPAV 636
           RKW+   GRNRF C GRL+ +   G F++T+ L+  T  ++F FD PFL    S A+P V
Sbjct: 39  RKWQSHPGRNRFGCGGRLVCSRSHGAFVVTVILMIATLTVYFVFDAPFL-WGYSPAIPIV 97

Query: 637 GAALFVLTL 663
            A L ++ +
Sbjct: 98  AAVLSLIVI 106


>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical protein
            T01H10.8 protein.
          Length = 2692

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
 Frame = +1

Query: 346  SELTTIKGEILRKAET*VGNARVG--AAGHGAMASRRVTRKWEVFA----GRNRFWCDGR 507
            +++  IKG  ++K ET   N  VG  A  H      +++   + F     G+N+F   G 
Sbjct: 2540 NQIRFIKGWRIKKRET-KKNKYVGKFAREHSEQIMAKISINAKPFISKYIGKNQFVHSGV 2598

Query: 508  LMTAPHPGVFLLTLALI 558
            +   P PG+ + TLA+I
Sbjct: 2599 ISMPPEPGMGIQTLAMI 2615


>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical protein
            T01H10.8 protein.
          Length = 2692

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
 Frame = +1

Query: 346  SELTTIKGEILRKAET*VGNARVG--AAGHGAMASRRVTRKWEVFA----GRNRFWCDGR 507
            +++  IKG  ++K ET   N  VG  A  H      +++   + F     G+N+F   G 
Sbjct: 2540 NQIRFIKGWRIKKRET-KKNKYVGKFAREHSEQIMAKISINAKPFISKYIGKNQFVHSGV 2598

Query: 508  LMTAPHPGVFLLTLALI 558
            +   P PG+ + TLA+I
Sbjct: 2599 ISMPPEPGMGIQTLAMI 2615


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,920,033
Number of Sequences: 27780
Number of extensions: 289515
Number of successful extensions: 820
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)