Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_H22
         (932 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   4.5  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   7.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = -3

Query: 216 IVQFYELICLFVLRSAFSLIRLXDTTLIHYSNFFC 112
           +V  + L+C++    AF +  +    L+   +FFC
Sbjct: 137 VVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFC 171


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = -3

Query: 126 SNFFCICLPERK*-TCSFRGSHCERVS 49
           ++F C C    K  TCS + SHC+  +
Sbjct: 126 ADFECNCKNGWKGKTCSLKDSHCDHTT 152


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/40 (20%), Positives = 20/40 (50%)
 Frame = -3

Query: 222  IPIVQFYELICLFVLRSAFSLIRLXDTTLIHYSNFFCICL 103
            +P++ F+ L  L + ++ F ++     + IH+     I +
Sbjct: 1324 VPLLLFFGLNFLIITQAMFLVVGQLQASQIHWQKIIIIVM 1363


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,333
Number of Sequences: 336
Number of extensions: 2037
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26168549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)