Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_H18
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453...    40   0.003
01_01_0777 - 6017131-6017243,6018069-6018339,6018432-6018617,601...    29   3.6  
03_02_1011 + 13198641-13198899,13199471-13199604,13199805-131999...    29   6.2  
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    28   8.3  

>01_04_0053 -
           15444421-15444747,15444905-15445116,15445198-15445377,
           15445572-15445836,15446308-15446522,15446611-15446784,
           15446872-15447010,15447523-15447786
          Length = 591

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 18/44 (40%), Positives = 28/44 (63%)
 Frame = +1

Query: 640 QENSLQTYYXEFKKVISEAEVILEIVDAXGSLXTRCXXXKRXSR 771
           Q++S + +Y E  KVI  ++VILE++DA   L TRC   ++  R
Sbjct: 134 QDHSERAFYKELVKVIEASDVILEVLDARDPLGTRCIDMEKMVR 177



 Score = 36.7 bits (81), Expect = 0.024
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +3

Query: 231 MAKFKLKKPSKRQPARLRYKIEKKVKEHNRKQRXXXXXXXXXXXXXPIQ---IPNICPFK 401
           M K   K  SKR   R ++K+ +KVKEH+RK+R               +   IPN  PFK
Sbjct: 1   MVKKSKKSKSKRVTLRQKHKVLRKVKEHHRKKRKEAKKEGKSHRKKVEKDPGIPNEWPFK 60

Query: 402 EDIL 413
           E  L
Sbjct: 61  EQEL 64


>01_01_0777 -
           6017131-6017243,6018069-6018339,6018432-6018617,
           6018703-6018735,6018827-6018925,6019042-6019281,
           6019747-6020064,6020197-6020254,6020333-6020389,
           6020577-6020792,6020885-6021000
          Length = 568

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -2

Query: 401 FKWTYIRNLNWLGFLRFRILFSFFTLFTIMLFHFFFYFVSKT 276
           F+  Y+RNL+W   L   I+ SFF +  I+ F F  Y   K+
Sbjct: 58  FELAYLRNLSWKVSLVDNIIDSFFAIDIILTF-FLAYLDQKS 98


>03_02_1011 +
           13198641-13198899,13199471-13199604,13199805-13199934,
           13200290-13200450,13200587-13200688,13200786-13200890,
           13200965-13201093,13201180-13201320,13201855-13201955,
           13202300-13202357,13202656-13202943
          Length = 535

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +1

Query: 664 YXEFKKVISEAEVILEIVDAXGSLXTRC 747
           + E  KVI  ++V+++++DA   + TRC
Sbjct: 213 WGELYKVIDSSDVVVQVLDARDPMGTRC 240


>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 371 WLGFLRFRILFSFFTLFTIMLFHFFFY 291
           W G+  F   F FF  F    F FFF+
Sbjct: 82  WEGYAFFFFFFFFFFFFFFFFFFFFFF 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,717,190
Number of Sequences: 37544
Number of extensions: 186181
Number of successful extensions: 332
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)