Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_H18
         (855 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY825265-1|AAV74413.1|  549|Homo sapiens nucleostemin protein.         53   1e-06
BC001024-1|AAH01024.1|  549|Homo sapiens guanine nucleotide bind...    52   3e-06
AK027516-1|BAB55169.1|  549|Homo sapiens protein ( Homo sapiens ...    52   3e-06
AF191018-1|AAF09482.1|  560|Homo sapiens E2IG3 protein.                52   3e-06
BC011720-1|AAH11720.1|  582|Homo sapiens GNL3L protein protein.        42   0.003
BC003603-1|AAH03603.1|  575|Homo sapiens Unknown (protein for IM...    42   0.003
AL391139-1|CAI40396.1|  582|Homo sapiens guanine nucleotide bind...    42   0.003
AK001475-1|BAA91712.1|  582|Homo sapiens protein ( Homo sapiens ...    42   0.003
AK027514-1|BAB55168.1|  537|Homo sapiens protein ( Homo sapiens ...    40   0.015

>AY825265-1|AAV74413.1|  549|Homo sapiens nucleostemin protein.
          Length = 549

 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 28/61 (45%), Positives = 33/61 (54%)
 Frame = +3

Query: 231 MAKFKLKKPSKRQPARLRYKIEKKVKEHNRKQRXXXXXXXXXXXXXPIQIPNICPFKEDI 410
           M K KLKK SKR     RYKI+KKV+EH+RK R                +PN  PFKE +
Sbjct: 1   MKKPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKQGHKKPRKDPGVPNSAPFKEAL 60

Query: 411 L 413
           L
Sbjct: 61  L 61



 Score = 37.5 bits (83), Expect = 0.061
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +1

Query: 640 QENSLQTYYXEFKKVISEAEVILEIVDAXGSLXTRC 747
           ++NS + Y  E KKVI  ++V+LE++DA   L  RC
Sbjct: 123 KQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRC 158


>BC001024-1|AAH01024.1|  549|Homo sapiens guanine nucleotide binding
           protein-like 3 (nucleolar) protein.
          Length = 549

 Score = 52.0 bits (119), Expect = 3e-06
 Identities = 27/61 (44%), Positives = 33/61 (54%)
 Frame = +3

Query: 231 MAKFKLKKPSKRQPARLRYKIEKKVKEHNRKQRXXXXXXXXXXXXXPIQIPNICPFKEDI 410
           M + KLKK SKR     RYKI+KKV+EH+RK R                +PN  PFKE +
Sbjct: 1   MKRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKQGHKKPRKDPGVPNSAPFKEAL 60

Query: 411 L 413
           L
Sbjct: 61  L 61



 Score = 37.5 bits (83), Expect = 0.061
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +1

Query: 640 QENSLQTYYXEFKKVISEAEVILEIVDAXGSLXTRC 747
           ++NS + Y  E KKVI  ++V+LE++DA   L  RC
Sbjct: 123 KQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRC 158


>AK027516-1|BAB55169.1|  549|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14610 fis, clone NT2RP1000958, weakly similar to
           AUTOANTIGEN NGP-1. ).
          Length = 549

 Score = 52.0 bits (119), Expect = 3e-06
 Identities = 27/61 (44%), Positives = 33/61 (54%)
 Frame = +3

Query: 231 MAKFKLKKPSKRQPARLRYKIEKKVKEHNRKQRXXXXXXXXXXXXXPIQIPNICPFKEDI 410
           M + KLKK SKR     RYKI+KKV+EH+RK R                +PN  PFKE +
Sbjct: 1   MKRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEAL 60

Query: 411 L 413
           L
Sbjct: 61  L 61



 Score = 37.5 bits (83), Expect = 0.061
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +1

Query: 640 QENSLQTYYXEFKKVISEAEVILEIVDAXGSLXTRC 747
           ++NS + Y  E KKVI  ++V+LE++DA   L  RC
Sbjct: 123 KQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRC 158


>AF191018-1|AAF09482.1|  560|Homo sapiens E2IG3 protein.
          Length = 560

 Score = 52.0 bits (119), Expect = 3e-06
 Identities = 27/61 (44%), Positives = 33/61 (54%)
 Frame = +3

Query: 231 MAKFKLKKPSKRQPARLRYKIEKKVKEHNRKQRXXXXXXXXXXXXXPIQIPNICPFKEDI 410
           M + KLKK SKR     RYKI+KKV+EH+RK R                +PN  PFKE +
Sbjct: 1   MKRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKQGHKKPRKDPGVPNSAPFKEAL 60

Query: 411 L 413
           L
Sbjct: 61  L 61



 Score = 37.5 bits (83), Expect = 0.061
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +1

Query: 640 QENSLQTYYXEFKKVISEAEVILEIVDAXGSLXTRC 747
           ++NS + Y  E KKVI  ++V+LE++DA   L  RC
Sbjct: 123 KQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRC 158


>BC011720-1|AAH11720.1|  582|Homo sapiens GNL3L protein protein.
          Length = 582

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +1

Query: 580 EAFNGDSQPSQDIEFGKDXKQENSLQTYYXEFKKVISEAEVILEIVDAXGSLXTRC 747
           E F    +  Q++        E + + YY EF+KV+  ++VILE++DA   L  RC
Sbjct: 97  EEFEHKEEVLQELNMFPQLDDEATRKAYYKEFRKVVEYSDVILEVLDARDPLGCRC 152


>BC003603-1|AAH03603.1|  575|Homo sapiens Unknown (protein for
           IMAGE:3543897) protein.
          Length = 575

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +1

Query: 580 EAFNGDSQPSQDIEFGKDXKQENSLQTYYXEFKKVISEAEVILEIVDAXGSLXTRC 747
           E F    +  Q++        E + + YY EF+KV+  ++VILE++DA   L  RC
Sbjct: 97  EEFEHKEEVLQELNMFPQLDDEATRKAYYKEFRKVVEYSDVILEVLDARDPLGCRC 152


>AL391139-1|CAI40396.1|  582|Homo sapiens guanine nucleotide binding
           protein-like 3 (nucleolar)-like protein.
          Length = 582

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +1

Query: 580 EAFNGDSQPSQDIEFGKDXKQENSLQTYYXEFKKVISEAEVILEIVDAXGSLXTRC 747
           E F    +  Q++        E + + YY EF+KV+  ++VILE++DA   L  RC
Sbjct: 97  EEFEHKEEVLQELNMFPQLDDEATRKAYYKEFRKVVEYSDVILEVLDARDPLGCRC 152


>AK001475-1|BAA91712.1|  582|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10613 fis, clone NT2RP2005393, weakly similar to
           AUTOANTIGEN NGP-1. ).
          Length = 582

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +1

Query: 580 EAFNGDSQPSQDIEFGKDXKQENSLQTYYXEFKKVISEAEVILEIVDAXGSLXTRC 747
           E F    +  Q++        E + + YY EF+KV+  ++VILE++DA   L  RC
Sbjct: 97  EEFEHKEEVLQELNMFPQLDDEATRKAYYKEFRKVVEYSDVILEVLDARDPLGCRC 152


>AK027514-1|BAB55168.1|  537|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14608 fis, clone NT2RP1000915, weakly similar to
           AUTOANTIGEN NGP-1. ).
          Length = 537

 Score = 39.5 bits (88), Expect = 0.015
 Identities = 19/44 (43%), Positives = 24/44 (54%)
 Frame = +3

Query: 282 RYKIEKKVKEHNRKQRXXXXXXXXXXXXXPIQIPNICPFKEDIL 413
           RYKI+KKV+EH+RK R                +PN  PFKE +L
Sbjct: 6   RYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALL 49



 Score = 37.5 bits (83), Expect = 0.061
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +1

Query: 640 QENSLQTYYXEFKKVISEAEVILEIVDAXGSLXTRC 747
           ++NS + Y  E KKVI  ++V+LE++DA   L  RC
Sbjct: 111 KQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRC 146


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,703,896
Number of Sequences: 237096
Number of extensions: 1133404
Number of successful extensions: 5459
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5453
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)