Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_H18
         (855 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118455-1|AAM49824.1|  581|Drosophila melanogaster AT23067p pro...    60   5e-09
AE014297-2303|AAN13730.1|  581|Drosophila melanogaster CG3983-PB...    60   5e-09
AE014297-2302|AAF55384.3|  581|Drosophila melanogaster CG3983-PA...    60   5e-09

>AY118455-1|AAM49824.1|  581|Drosophila melanogaster AT23067p
           protein.
          Length = 581

 Score = 59.7 bits (138), Expect = 5e-09
 Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
 Frame = +3

Query: 231 MAKFKLK-KPSKRQPARLRYKIEKKVKEHNRKQRXXXXXXXXXXXXXP--IQIPNICPFK 401
           MA  +LK K SKR   RL++KIEKKV++HN+K+R                IQIPNICPFK
Sbjct: 1   MALKRLKTKKSKRLTGRLKHKIEKKVRDHNKKERRAAKKNPKKGSKKQKLIQIPNICPFK 60

Query: 402 EDIL 413
           +DIL
Sbjct: 61  DDIL 64



 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = +1

Query: 553 NAQARGKVHEAFN-GDSQPSQDIEFGKDXKQENSLQTYYXEFKKVISEAEVILEIVDAXG 729
           +A  R  VH   +  D+Q   + ++     +E SL+ Y+ EF+KVI  A+V+LE+VDA  
Sbjct: 103 DADMRSTVHGIMHENDAQDQDEKKYKNAVTKEQSLKQYFKEFRKVIENADVVLEVVDARD 162

Query: 730 SLXTRCXXXKRXSR 771
            L TRC   +R  R
Sbjct: 163 PLGTRCNEVERAVR 176


>AE014297-2303|AAN13730.1|  581|Drosophila melanogaster CG3983-PB,
           isoform B protein.
          Length = 581

 Score = 59.7 bits (138), Expect = 5e-09
 Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
 Frame = +3

Query: 231 MAKFKLK-KPSKRQPARLRYKIEKKVKEHNRKQRXXXXXXXXXXXXXP--IQIPNICPFK 401
           MA  +LK K SKR   RL++KIEKKV++HN+K+R                IQIPNICPFK
Sbjct: 1   MALKRLKTKKSKRLTGRLKHKIEKKVRDHNKKERRAAKKNPKKGSKKQKLIQIPNICPFK 60

Query: 402 EDIL 413
           +DIL
Sbjct: 61  DDIL 64



 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = +1

Query: 553 NAQARGKVHEAFN-GDSQPSQDIEFGKDXKQENSLQTYYXEFKKVISEAEVILEIVDAXG 729
           +A  R  VH   +  D+Q   + ++     +E SL+ Y+ EF+KVI  A+V+LE+VDA  
Sbjct: 103 DADMRSTVHGIMHENDAQDQDEKKYKNAVTKEQSLKQYFKEFRKVIENADVVLEVVDARD 162

Query: 730 SLXTRCXXXKRXSR 771
            L TRC   +R  R
Sbjct: 163 PLGTRCNEVERAVR 176


>AE014297-2302|AAF55384.3|  581|Drosophila melanogaster CG3983-PA,
           isoform A protein.
          Length = 581

 Score = 59.7 bits (138), Expect = 5e-09
 Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
 Frame = +3

Query: 231 MAKFKLK-KPSKRQPARLRYKIEKKVKEHNRKQRXXXXXXXXXXXXXP--IQIPNICPFK 401
           MA  +LK K SKR   RL++KIEKKV++HN+K+R                IQIPNICPFK
Sbjct: 1   MALKRLKTKKSKRLTGRLKHKIEKKVRDHNKKERRAAKKNPKKGSKKQKLIQIPNICPFK 60

Query: 402 EDIL 413
           +DIL
Sbjct: 61  DDIL 64



 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = +1

Query: 553 NAQARGKVHEAFN-GDSQPSQDIEFGKDXKQENSLQTYYXEFKKVISEAEVILEIVDAXG 729
           +A  R  VH   +  D+Q   + ++     +E SL+ Y+ EF+KVI  A+V+LE+VDA  
Sbjct: 103 DADMRSTVHGIMHENDAQDQDEKKYKNAVTKEQSLKQYFKEFRKVIENADVVLEVVDARD 162

Query: 730 SLXTRCXXXKRXSR 771
            L TRC   +R  R
Sbjct: 163 PLGTRCNEVERAVR 176


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,763,183
Number of Sequences: 53049
Number of extensions: 339888
Number of successful extensions: 852
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)