Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_H16
         (862 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   4.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   7.2  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   9.5  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   9.5  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -2

Query: 285 AVVSDYFEKTRVRLHCHFSIVTNNIIALL 199
           AVV DYFE+          ++T  +  L+
Sbjct: 141 AVVLDYFERLGANQELSLELITRKLATLM 169


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -2

Query: 660 AQKPHQKSLKVPRIFHCLTHKSEIHLSRRYSPHHE 556
           A KPH+++  V +    +     IH   +Y P  E
Sbjct: 360 ASKPHERTFTVEKDTMVMISMFAIHRDPQYFPDPE 394


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -2

Query: 585 LSRRYSPHHEWENRFNNVVQ 526
           L  +Y P  E+++R+N+ ++
Sbjct: 100 LQEKYDPKGEYKSRYNHFLE 119


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 637 IEGATYLSLFNTQKRNPFESSLFTASRM 554
           I+  T LSL NTQ+  P +  L     M
Sbjct: 81  IKEKTVLSLRNTQEEEPPDPQLMRLDNM 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,136
Number of Sequences: 336
Number of extensions: 4035
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)