Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_H16
         (862 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1097 + 8682250-8682337,8682406-8682474,8683014-8683222,868...    31   1.6  
03_04_0243 + 19298293-19299117                                         30   2.1  
11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160     28   8.3  

>01_01_1097 +
           8682250-8682337,8682406-8682474,8683014-8683222,
           8683468-8683657,8684619-8685010,8685610-8686098
          Length = 478

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = +1

Query: 226 NTKVTMETNSCLLKVVGNNCVIYVRTNYGDIEVVGNNCR--VEVTNNYGFINLMGGNGFV 399
           + + +  + SC LK  G+  ++ +R N G  E      R   + TNN+    L+G  GF 
Sbjct: 52  SVEYSKSSESCPLKTEGSIDMVGIRRNKGHGEATIFTLRELADATNNFSTECLLGRGGFG 111

Query: 400 NINKRWKGD 426
           ++ K +  D
Sbjct: 112 SVYKAFLND 120


>03_04_0243 + 19298293-19299117
          Length = 274

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 26/85 (30%), Positives = 34/85 (40%)
 Frame = -1

Query: 661 STETTSKVIEGATYLSLFNTQKRNPFESSLFTASRMGKSVQ*RRPGPCWMATVGPRRTGL 482
           S+ETT  V     Y+  F  ++   +   + T S        R PG  W A + P     
Sbjct: 143 SSETTMLVTGATGYIGCFVVRELLRWGHPVVTDSLS------RAPGAAWAAAMAPTSWSR 196

Query: 481 TSASPQRSAYNSSRGAERCRPSNVC 407
           TSA P  S+  S R   R R S  C
Sbjct: 197 TSAPPASSSPTSPR---RARSSLTC 218


>11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160
          Length = 306

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 355 SSPPPDNCCQPPRCRRN*YE 296
           ++P P +CC PP C +  YE
Sbjct: 226 AAPAPPSCCAPPPCYQGCYE 245


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,698,439
Number of Sequences: 37544
Number of extensions: 431264
Number of successful extensions: 1106
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)