Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_H15
(898 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 26 0.35
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 26 0.46
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 25 1.1
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 25 1.1
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 24 1.9
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 4.3
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 23 4.3
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 23 4.3
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 4.3
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 22 7.5
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 26.2 bits (55), Expect = 0.35
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = -3
Query: 392 GMNVPSRSFKVATSFTLPFSLASFSSAILVLYCSSVRSPVSRFCLP 255
G PS+ V+ S ++P +ASF Y V P LP
Sbjct: 1289 GEGQPSKKVTVSPSASVPAKIASFDDTFTTTYKEDVTLPCLAVGLP 1334
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 25.8 bits (54), Expect = 0.46
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 744 WITDDIFGIRTVAFLQRHRIVDE 676
W+ D +F IR A L ++VD+
Sbjct: 452 WLMDHVFAIREAATLNLRKLVDQ 474
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +3
Query: 90 RKSKILDIFLIFVLEIFSKIKQNEDNLVHIVLLRVQE 200
R+ K +D+F+IF L K++ +++ V + ++QE
Sbjct: 223 RQIKSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQE 259
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +3
Query: 90 RKSKILDIFLIFVLEIFSKIKQNEDNLVHIVLLRVQE 200
R+ K +D+F+IF L K++ +++ V + ++QE
Sbjct: 179 RQIKSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQE 215
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 23.8 bits (49), Expect = 1.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 582 THNEKLVSPHGAVVNLVLDRFSY 514
T+N LV+P+G V ++D SY
Sbjct: 511 TYNRHLVAPNGDHVISLIDEISY 533
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.6 bits (46), Expect = 4.3
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1
Query: 799 RYEVFHAEPGVH 764
+YEVF+ PG+H
Sbjct: 1301 KYEVFNCAPGLH 1312
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -3
Query: 197 LNTKKHNMNQIIFILFDFTKDFQ 129
L + MNQ ++ DF ++FQ
Sbjct: 609 LTSNVFRMNQFVYDAIDFLREFQ 631
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 22.6 bits (46), Expect = 4.3
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -3
Query: 716 ELLPSFNDIGLWMRKRSKNSKPRSASEILQAVSTRSVRWNVLHNLP 579
ELLP ++ G+ RKR K P ++ + L N+P
Sbjct: 340 ELLPLDSEPGMLKRKRQKYHDPSQLLRHVEESDKQRTHQPFLLNIP 385
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 667 RKTPSPGLPVKSCRPSPPDR 608
RK PG+P+ S S PD+
Sbjct: 828 RKMEPPGVPLNSTPRSTPDK 847
Score = 22.2 bits (45), Expect = 5.7
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -1
Query: 673 RGRKTPSPGLPVKSCRPSPPDRCDGMYST 587
+G + S G+P+K PP G ST
Sbjct: 1095 QGSSSSSEGVPLKGTAVPPPSGSSGPGST 1123
Score = 21.8 bits (44), Expect = 7.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 600 PSHRSGGDGLQDFTGR 647
P H GDG+ DF+ R
Sbjct: 196 PMHSPPGDGILDFSKR 211
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +1
Query: 586 LWSTFHRTDLVETACRISLADLGLEFFDLFLIH 684
+W ++ RT + T + L + FF F++H
Sbjct: 123 IWKSYKRTQIFITCELFFVILLWISFFLNFMLH 155
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,084
Number of Sequences: 336
Number of extensions: 4562
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -