Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_H12
         (988 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.6  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   2.8  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   3.6  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   3.6  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   4.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   4.8  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 245 QENHIFLIVLTIKNV*KKSTC 307
           +EN I L+V T+++V   STC
Sbjct: 629 KENEITLLVATVRHVMAPSTC 649


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = +3

Query: 525 ILYVMNITDIDDKIIKRARQKYLYEKYLKEPRNLNDTIDDAVNVINYYEEAVKNAED 695
           I+  M +T +        R+     K   EP+N  D  DDA  +++  ++  K+ ED
Sbjct: 122 IITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDA--LVSDSDDREKDEED 176


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 480 FDILRRVMANYFGYDILYVMNITDIDDKIIK 572
           F I  + + +  G  + Y++ I   DDKI++
Sbjct: 359 FTIETKTVLDVLGVTVTYLIVIIQFDDKIVQ 389


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 480 FDILRRVMANYFGYDILYVMNITDIDDKIIK 572
           F I  + + +  G  + Y++ I   DDKI++
Sbjct: 285 FTIETKTVLDVLGVTVTYLIVIIQFDDKIVQ 315


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -1

Query: 139 FHHIEPGERKIRITVKILLYRYG 71
           F  I PG RK R T    +Y YG
Sbjct: 15  FFAITPGFRKNRTTCPEKIYAYG 37


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -1

Query: 139 FHHIEPGERKIRITVKILLYRYG 71
           F  I PG RK R T    +Y YG
Sbjct: 15  FFAITPGFRKNRTTCPEKIYAYG 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,684
Number of Sequences: 336
Number of extensions: 3989
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28030343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)