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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_H11
         (901 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92808-1|CAB07266.2|  606|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z81476-3|CAB03922.3|  592|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z68337-8|CAA92749.2|  241|Caenorhabditis elegans Hypothetical pr...    29   6.0  
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso...    29   6.0  
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso...    29   6.0  
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor...    29   6.0  
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor...    29   6.0  
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor...    29   6.0  
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor...    29   6.0  

>Z92808-1|CAB07266.2|  606|Caenorhabditis elegans Hypothetical
           protein M04C3.2 protein.
          Length = 606

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 243 ESWKKLLRTLIEAENLCNVFKYYGVDK 323
           ESWKKLL  L+E ++L   + Y   DK
Sbjct: 294 ESWKKLLEKLLEKDDLVIHYFYRNEDK 320


>Z81476-3|CAB03922.3|  592|Caenorhabditis elegans Hypothetical
           protein C25F9.4 protein.
          Length = 592

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 243 ESWKKLLRTLIEAENLCNVFKYYGVDK 323
           ESWKKLL  L+E ++L   + Y   DK
Sbjct: 293 ESWKKLLEKLLEKDDLVIHYFYRNEDK 319


>Z68337-8|CAA92749.2|  241|Caenorhabditis elegans Hypothetical
           protein M7.12 protein.
          Length = 241

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
 Frame = +3

Query: 345 TVLPEHRGQNIGARLFAAREPLGNALGIEATATVFTATT--SQVLAAKCGYETLAELKYS 518
           +V   H+ Q + ++     E       +EA++ V  A++  +Q+L +K GYET+A    S
Sbjct: 154 SVNKNHQRQGLASKFMNWTEKKELLKSVEASSIVAEASSLANQILLSKRGYETVASTLLS 213

Query: 519 DMLKF-GINLTECT--TDRAKLM 578
             +   G  +  C   TDR  L+
Sbjct: 214 SRIDVNGKQILVCDDGTDRVDLV 236


>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform g protein.
          Length = 1604

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = +3

Query: 201  SIDDIDEDLDTVKGESWKKLLRTLIEAENLCNVFKYYGVDK----YLTSSGLTVLPEHRG 368
            S D I E   + +GE +  +LR  +  +NL +   Y+G+D     Y    GL+   + + 
Sbjct: 1529 SADCISESYRSTEGEEYCNILRPFLRGQNLYSF--YFGLDSVNPMYRPKDGLSGRIQRKN 1586

Query: 369  QNIGARL 389
            + I A L
Sbjct: 1587 ETIAAVL 1593


>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform f protein.
          Length = 1818

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = +3

Query: 201  SIDDIDEDLDTVKGESWKKLLRTLIEAENLCNVFKYYGVDK----YLTSSGLTVLPEHRG 368
            S D I E   + +GE +  +LR  +  +NL +   Y+G+D     Y    GL+   + + 
Sbjct: 1743 SADCISESYRSTEGEEYCNILRPFLRGQNLYSF--YFGLDSVNPMYRPKDGLSGRIQRKN 1800

Query: 369  QNIGARL 389
            + I A L
Sbjct: 1801 ETIAAVL 1807


>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform e protein.
          Length = 1954

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = +3

Query: 201  SIDDIDEDLDTVKGESWKKLLRTLIEAENLCNVFKYYGVDK----YLTSSGLTVLPEHRG 368
            S D I E   + +GE +  +LR  +  +NL +   Y+G+D     Y    GL+   + + 
Sbjct: 1879 SADCISESYRSTEGEEYCNILRPFLRGQNLYSF--YFGLDSVNPMYRPKDGLSGRIQRKN 1936

Query: 369  QNIGARL 389
            + I A L
Sbjct: 1937 ETIAAVL 1943


>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform d protein.
          Length = 1995

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = +3

Query: 201  SIDDIDEDLDTVKGESWKKLLRTLIEAENLCNVFKYYGVDK----YLTSSGLTVLPEHRG 368
            S D I E   + +GE +  +LR  +  +NL +   Y+G+D     Y    GL+   + + 
Sbjct: 1920 SADCISESYRSTEGEEYCNILRPFLRGQNLYSF--YFGLDSVNPMYRPKDGLSGRIQRKN 1977

Query: 369  QNIGARL 389
            + I A L
Sbjct: 1978 ETIAAVL 1984


>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform h protein.
          Length = 2006

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = +3

Query: 201  SIDDIDEDLDTVKGESWKKLLRTLIEAENLCNVFKYYGVDK----YLTSSGLTVLPEHRG 368
            S D I E   + +GE +  +LR  +  +NL +   Y+G+D     Y    GL+   + + 
Sbjct: 1931 SADCISESYRSTEGEEYCNILRPFLRGQNLYSF--YFGLDSVNPMYRPKDGLSGRIQRKN 1988

Query: 369  QNIGARL 389
            + I A L
Sbjct: 1989 ETIAAVL 1995


>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform a protein.
          Length = 2007

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = +3

Query: 201  SIDDIDEDLDTVKGESWKKLLRTLIEAENLCNVFKYYGVDK----YLTSSGLTVLPEHRG 368
            S D I E   + +GE +  +LR  +  +NL +   Y+G+D     Y    GL+   + + 
Sbjct: 1932 SADCISESYRSTEGEEYCNILRPFLRGQNLYSF--YFGLDSVNPMYRPKDGLSGRIQRKN 1989

Query: 369  QNIGARL 389
            + I A L
Sbjct: 1990 ETIAAVL 1996


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,754,165
Number of Sequences: 27780
Number of extensions: 261551
Number of successful extensions: 813
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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