Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_H09
(914 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 231 1e-61
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 223 2e-59
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 194 2e-50
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 188 7e-49
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 129 5e-31
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 78 2e-15
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 60 4e-10
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 42 2e-04
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 32 0.13
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 30 0.40
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 1.2
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 27 4.9
SPAC6F6.16c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 8.6
SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr 2|||M... 26 8.6
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 26 8.6
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 231 bits (565), Expect = 1e-61
Identities = 106/131 (80%), Positives = 119/131 (90%)
Frame = +2
Query: 143 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 322
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 323 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 502
TIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 503 KMKETAEAYLG 535
KM+ETAEAYLG
Sbjct: 124 KMRETAEAYLG 134
Score = 122 bits (293), Expect = 9e-29
Identities = 61/92 (66%), Positives = 70/92 (76%)
Frame = +3
Query: 456 KTKPFSPRKSVPWCLRK*RKLPKLISGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 635
+TK F+P + L K R+ + G V +AV+TVPAYFNDSQRQATKDAG I+GLNV
Sbjct: 108 ETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNV 167
Query: 636 LRIINEPTAAAIAYGLDKKGTGERNVLIFDLG 731
LRIINEPTAAAIAYGLD+ GE NVLIFDLG
Sbjct: 168 LRIINEPTAAAIAYGLDRSNQGESNVLIFDLG 199
Score = 62.5 bits (145), Expect = 8e-11
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +1
Query: 730 GGGTFDVSILTIEDGIFEVKSTAGDTHLGR*GL*HRMVN 846
GGGTFDVS+LTIE+GIFEVK+TAGDTHLG R+VN
Sbjct: 199 GGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVN 237
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 223 bits (546), Expect = 2e-59
Identities = 102/131 (77%), Positives = 117/131 (89%)
Frame = +2
Query: 143 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 322
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 323 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 502
TIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 503 KMKETAEAYLG 535
KM+E+AEA+LG
Sbjct: 124 KMRESAEAFLG 134
Score = 118 bits (284), Expect = 1e-27
Identities = 60/92 (65%), Positives = 69/92 (75%)
Frame = +3
Query: 456 KTKPFSPRKSVPWCLRK*RKLPKLISGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 635
+TK F+P + L K R+ + G V +AV+TVPAYFNDSQRQATKDAG I+GLNV
Sbjct: 108 ETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNV 167
Query: 636 LRIINEPTAAAIAYGLDKKGTGERNVLIFDLG 731
LRIINEPTAAAIAYGLD+ E NVLIFDLG
Sbjct: 168 LRIINEPTAAAIAYGLDRSNQHETNVLIFDLG 199
Score = 62.5 bits (145), Expect = 8e-11
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +1
Query: 730 GGGTFDVSILTIEDGIFEVKSTAGDTHLGR*GL*HRMVN 846
GGGTFDVS+LTIE+GIFEVK+TAGDTHLG R+VN
Sbjct: 199 GGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVN 237
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 194 bits (472), Expect = 2e-50
Identities = 88/132 (66%), Positives = 107/132 (81%)
Frame = +2
Query: 143 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 322
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 323 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 502
T+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+MVLT
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
Query: 503 KMKETAEAYLGQ 538
KMKE +EA L +
Sbjct: 128 KMKEISEAKLNK 139
Score = 109 bits (263), Expect = 4e-25
Identities = 56/90 (62%), Positives = 67/90 (74%)
Frame = +3
Query: 462 KPFSPRKSVPWCLRK*RKLPKLISGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 641
K F+ ++ L K +++ + K V+ AVITVPAYF+DSQR ATKDAG I+GLNVLR
Sbjct: 114 KQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLR 173
Query: 642 IINEPTAAAIAYGLDKKGTGERNVLIFDLG 731
IINEPTAAAIAYGLD K +NVLIFDLG
Sbjct: 174 IINEPTAAAIAYGLDAKSDKPKNVLIFDLG 203
Score = 52.4 bits (120), Expect = 9e-08
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +1
Query: 730 GGGTFDVSILTIEDGIFEVKSTAGDTHLG 816
GGGTFDVS+L I+ G+FEV +TAGDTHLG
Sbjct: 203 GGGTFDVSLLKIQGGVFEVLATAGDTHLG 231
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 188 bits (459), Expect = 7e-49
Identities = 84/131 (64%), Positives = 108/131 (82%)
Frame = +2
Query: 146 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 325
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 326 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 505
IFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M+L+K
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSK 157
Query: 506 MKETAEAYLGQ 538
MK+TAEAYLG+
Sbjct: 158 MKQTAEAYLGK 168
Score = 114 bits (275), Expect = 1e-26
Identities = 55/92 (59%), Positives = 72/92 (78%)
Frame = +3
Query: 456 KTKPFSPRKSVPWCLRK*RKLPKLISGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 635
K K F+P + L K ++ + GK V +AV+TVPAYFND+QRQATKDAGTI+GLNV
Sbjct: 141 KKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNV 200
Query: 636 LRIINEPTAAAIAYGLDKKGTGERNVLIFDLG 731
+RI+NEPTAAAIAYGLDK T E++++++DLG
Sbjct: 201 IRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLG 231
Score = 54.8 bits (126), Expect = 2e-08
Identities = 23/39 (58%), Positives = 33/39 (84%)
Frame = +1
Query: 730 GGGTFDVSILTIEDGIFEVKSTAGDTHLGR*GL*HRMVN 846
GGGTFDVS+L+I++G+FEV +T+GDTHLG +R++N
Sbjct: 231 GGGTFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVIN 269
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 129 bits (312), Expect = 5e-31
Identities = 62/137 (45%), Positives = 88/137 (64%), Gaps = 1/137 (0%)
Frame = +2
Query: 134 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 310
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 311 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 490
NP NT F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 109 NPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNG---DAWLEARGKTYSPSQIGG 165
Query: 491 MVLTKMKETAEAYLGQN 541
+L+KM+ETA YLG++
Sbjct: 166 FILSKMRETASTYLGKD 182
Score = 109 bits (262), Expect = 5e-25
Identities = 55/95 (57%), Positives = 69/95 (72%)
Frame = +3
Query: 447 IRVKTKPFSPRKSVPWCLRK*RKLPKLISGKTVQNAVITVPAYFNDSQRQATKDAGTISG 626
+ + K +SP + + L K R+ GK V+NAV+TVPAYFNDSQRQATK AG I+G
Sbjct: 151 LEARGKTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAG 210
Query: 627 LNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLG 731
LNVLR++NEPTAAA+AYGLDKK + V +FDLG
Sbjct: 211 LNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDLG 243
Score = 52.4 bits (120), Expect = 9e-08
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +1
Query: 730 GGGTFDVSILTIEDGIFEVKSTAGDTHLG 816
GGGTFD+SIL + +G+FEV+ST GDTHLG
Sbjct: 243 GGGTFDISILELNNGVFEVRSTNGDTHLG 271
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 78.2 bits (184), Expect = 2e-15
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Frame = +2
Query: 131 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 310
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 311 NPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 487
N NT+ KRL GR ++D ++ + ++ G KV Y E+ F ++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLI 122
Query: 488 SMVLTKMKETAEAYL 532
+ TK+K AEA L
Sbjct: 123 AAYFTKIKAIAEAEL 137
Score = 59.7 bits (138), Expect = 6e-10
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Frame = +3
Query: 540 TVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----R 707
+V + VI++PA+F D QR+A +A I+GLN LR++N+ AAA+ YG+ K E R
Sbjct: 140 SVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPR 199
Query: 708 NVLIFDLGR-RYLRRVHPYHRGWY 776
V I D G Y + + RG +
Sbjct: 200 RVAIVDFGHSNYSVSIVEFSRGQF 223
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 730 GGGTFDVSILTIEDGIFEVKSTAGDTHLG 816
G + VSI+ G F +KST D +LG
Sbjct: 207 GHSNYSVSIVEFSRGQFHIKSTVCDRNLG 235
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 60.1 bits (139), Expect = 4e-10
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Frame = +2
Query: 146 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 325
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 326 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGE------DKTFFPEEVS 487
+ + + L+G+ ++ T+ H+ V+ G+ K+ + + +K E S
Sbjct: 87 VTNFRDLLGKSHDELTLH--HCHYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEAS 144
Query: 488 SMVLTKMKETAEAYLGQNCAEC 553
L ++ E+AE +LG C
Sbjct: 145 VRHLRRLTESAEDFLGTKVNGC 166
Score = 48.4 bits (110), Expect = 1e-06
Identities = 22/66 (33%), Positives = 40/66 (60%)
Frame = +3
Query: 534 GKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNV 713
G V V++VP YF D+QR+A + A +GL VL++I++P A +A ++ ++ V
Sbjct: 160 GTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTV 219
Query: 714 LIFDLG 731
++ + G
Sbjct: 220 VVANFG 225
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 41.5 bits (93), Expect = 2e-04
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 516 LPKLISGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK- 692
L + ++ + + + V+TVP +FN+ QR +A I +VL +I++ A AI Y L +
Sbjct: 151 LAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSF 210
Query: 693 GTGERNVLIFDLG 731
T +I+D G
Sbjct: 211 STDPTYNIIYDSG 223
Score = 37.9 bits (84), Expect = 0.002
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Frame = +2
Query: 146 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 322
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 323 TIFDAKRLIGRK-FEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVSSMV 496
+I + K L+ E VQ +P + + + +++ +++ + EE+ +M
Sbjct: 85 SIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEIIAMT 144
Query: 497 LTKMKETAE 523
+ AE
Sbjct: 145 MEHYISLAE 153
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = -1
Query: 191 GRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARLTASLQVNQNLKEFPIVSR 12
G H RK T L ++ + + LF++QLSK +Q+ Q LKEF +
Sbjct: 588 GPHSRKVTTASKNRLKMLVFRLIRRSPNGGLFIRQLSKHFSDQNEMQIRQRLKEFMEYKK 647
Query: 11 KG 6
KG
Sbjct: 648 KG 649
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.40
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +2
Query: 251 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKP 430
+ F+D E GD A + P + AK L+G+ + + D P++V+ D P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 431 KIKVAYKGEDKTFFPE 478
+K+ G + F +
Sbjct: 185 -LKLMIDGTVRNFIAQ 199
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 138 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 233
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = -1
Query: 224 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARLTASLQVN 45
G W SP S + H ++++ +F +RVL C+ L K +K+A L +
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALLAVLPPIF 330
Query: 44 QNLK 33
++L+
Sbjct: 331 KSLR 334
>SPAC6F6.16c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 282
Score = 25.8 bits (54), Expect = 8.6
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = -1
Query: 800 PAVDFTSKIPSSMVRMDTSKVPPPEVKDKYISFSST---LFVKTVSNRSSSGFIDDSENV 630
PA++FTS I + + ++ + P P+ D +T L+V+ S + + N
Sbjct: 188 PAINFTSDICNEQIELEYKRKPIPDY-DFMKGLETTLQELYVEHQSKKRRLELFQLTNNH 246
Query: 629 QA*DGTCIFCGLSL 588
Q C C L L
Sbjct: 247 QKNSEACEMCRLGL 260
>SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1258
Score = 25.8 bits (54), Expect = 8.6
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Frame = +2
Query: 218 NDQGNRTTPSYVAFTDTERL-IGDAAK-NQVAMNPNNTIFDAKRLIGRKFEDATVQADMK 391
+ G +T ++A T E +G +K NQ +N T + + R F D T
Sbjct: 55 SSSGQNSTNPFLADTRIENSPLGSESKANQ--LNKQGTNVNHIEIPLRDFNDPTQPESFL 112
Query: 392 HWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGQNCAECSY 559
P + K KIK +K E K PE++ + +A +L + C Y
Sbjct: 113 PPPKNTFTSRIK-KIKNLFKKEKKQVKPEDLGPRQIILNDYSANHFLHNAVSTCKY 167
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 728 RAAVPSTCPSLPSRMVSSR*NPPPATPTW 814
+ ++PST P++PS +S + PP T ++
Sbjct: 297 KPSIPSTIPTIPSAYSASVSSQPPLTHSY 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,776,783
Number of Sequences: 5004
Number of extensions: 82427
Number of successful extensions: 290
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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