BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fdpeP01_F_H09 (914 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 249 2e-66 SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 246 1e-65 SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 225 3e-59 SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 194 6e-50 SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 105 7e-23 SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 75 1e-13 SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11 SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08 SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 2e-06 SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 0.001 SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 1.3 SB_23942| Best HMM Match : 5-nucleotidase (HMM E-Value=4) 31 1.7 SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 30 3.0 SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 4.0 SB_31091| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0 SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 4.0 SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 5.2 SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 5.2 SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 6.9 SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.9 >SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1097 Score = 249 bits (610), Expect = 2e-66 Identities = 114/136 (83%), Positives = 124/136 (91%) Frame = +2 Query: 128 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 307 MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60 Query: 308 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 487 MNP NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+S Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEIS 120 Query: 488 SMVLTKMKETAEAYLG 535 SMVLTKMKETAEAYLG Sbjct: 121 SMVLTKMKETAEAYLG 136 Score = 117 bits (281), Expect = 2e-26 Identities = 60/90 (66%), Positives = 69/90 (76%) Frame = +3 Query: 462 KPFSPRKSVPWCLRK*RKLPKLISGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 641 K F P + L K ++ + G V +AV+TVPAYF+DSQRQATKDAGTI+GLNVLR Sbjct: 112 KSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLR 171 Query: 642 IINEPTAAAIAYGLDKKGTGERNVLIFDLG 731 IINEPTAAAIAYGLDKK ERNVLI+DLG Sbjct: 172 IINEPTAAAIAYGLDKKVGVERNVLIYDLG 201 Score = 64.5 bits (150), Expect = 1e-10 Identities = 30/39 (76%), Positives = 34/39 (87%) Frame = +1 Query: 730 GGGTFDVSILTIEDGIFEVKSTAGDTHLGR*GL*HRMVN 846 GGGTFDVS+LTIEDGIFEVKSTAGDTHLG ++MV+ Sbjct: 201 GGGTFDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVD 239 >SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) Length = 640 Score = 246 bits (603), Expect = 1e-65 Identities = 113/137 (82%), Positives = 126/137 (91%) Frame = +2 Query: 128 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 307 M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60 Query: 308 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 487 +NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+S Sbjct: 61 LNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEIS 120 Query: 488 SMVLTKMKETAEAYLGQ 538 SMVL KMKETAEAYLGQ Sbjct: 121 SMVLGKMKETAEAYLGQ 137 Score = 119 bits (286), Expect = 4e-27 Identities = 59/90 (65%), Positives = 71/90 (78%) Frame = +3 Query: 462 KPFSPRKSVPWCLRK*RKLPKLISGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 641 K F+ + L K ++ + G+ V +AVITVPAYFNDSQRQATKDAGTI+GLNVLR Sbjct: 112 KTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLR 171 Query: 642 IINEPTAAAIAYGLDKKGTGERNVLIFDLG 731 +INEPTAAA+AYGLDK +GE+NVLIFDLG Sbjct: 172 VINEPTAAALAYGLDKSLSGEKNVLIFDLG 201 Score = 60.5 bits (140), Expect = 2e-09 Identities = 30/40 (75%), Positives = 34/40 (85%), Gaps = 1/40 (2%) Frame = +1 Query: 730 GGGTFDVSILTIEDG-IFEVKSTAGDTHLGR*GL*HRMVN 846 GGGTFDVSILTI+DG +FEVKSTAGDTHLG +R+VN Sbjct: 201 GGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVN 240 >SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 746 Score = 225 bits (551), Expect = 3e-59 Identities = 115/161 (71%), Positives = 124/161 (77%), Gaps = 25/161 (15%) Frame = +2 Query: 128 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 307 M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60 Query: 308 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV- 484 MNP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV Sbjct: 61 MNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVV 120 Query: 485 ------------------------SSMVLTKMKETAEAYLG 535 SSMVL KMKETAEAYLG Sbjct: 121 NEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLG 161 Score = 116 bits (278), Expect = 4e-26 Identities = 59/78 (75%), Positives = 64/78 (82%) Frame = +3 Query: 498 LRK*RKLPKLISGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAY 677 L K ++ + G V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAY Sbjct: 217 LNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAY 276 Query: 678 GLDKKGTGERNVLIFDLG 731 GLDKK ERNVLIFDLG Sbjct: 277 GLDKKVGQERNVLIFDLG 294 Score = 59.7 bits (138), Expect = 3e-09 Identities = 26/29 (89%), Positives = 28/29 (96%) Frame = +1 Query: 730 GGGTFDVSILTIEDGIFEVKSTAGDTHLG 816 GGGTFDVS+L+IEDGIFEVKST GDTHLG Sbjct: 294 GGGTFDVSVLSIEDGIFEVKSTHGDTHLG 322 Score = 52.8 bits (121), Expect = 4e-07 Identities = 27/53 (50%), Positives = 34/53 (64%) Frame = +3 Query: 456 KTKPFSPRKSVPWCLRK*RKLPKLISGKTVQNAVITVPAYFNDSQRQATKDAG 614 +TK F + L K ++ + G V +AV+TVPAYFNDSQRQATKDAG Sbjct: 135 ETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 187 Score = 36.7 bits (81), Expect = 0.026 Identities = 16/19 (84%), Positives = 18/19 (94%) Frame = +2 Query: 479 EVSSMVLTKMKETAEAYLG 535 ++SSMVL KMKETAEAYLG Sbjct: 211 QISSMVLNKMKETAEAYLG 229 >SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1327 Score = 194 bits (474), Expect = 6e-50 Identities = 92/132 (69%), Positives = 110/132 (83%), Gaps = 1/132 (0%) Frame = +2 Query: 146 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 322 +GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763 Query: 323 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 502 T+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+MVLT Sbjct: 764 TVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLT 823 Query: 503 KMKETAEAYLGQ 538 KMKETAEAYLG+ Sbjct: 824 KMKETAEAYLGK 835 Score = 115 bits (276), Expect = 6e-26 Identities = 59/108 (54%), Positives = 78/108 (72%), Gaps = 2/108 (1%) Frame = +3 Query: 414 VMEANLRSR*HIRVKT--KPFSPRKSVPWCLRK*RKLPKLISGKTVQNAVITVPAYFNDS 587 V++ N + ++VK K F+ + L K ++ + GK V +AV+TVPAYFND+ Sbjct: 792 VVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDA 851 Query: 588 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLG 731 QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLG Sbjct: 852 QRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLG 898 Score = 53.2 bits (122), Expect = 3e-07 Identities = 22/29 (75%), Positives = 27/29 (93%) Frame = +1 Query: 730 GGGTFDVSILTIEDGIFEVKSTAGDTHLG 816 GGGTFDVS+LTI++G+FEV +T GDTHLG Sbjct: 898 GGGTFDVSLLTIDNGVFEVVATNGDTHLG 926 >SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) Length = 437 Score = 105 bits (251), Expect = 7e-23 Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 3/136 (2%) Frame = +2 Query: 134 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 307 K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89 Query: 308 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEV 484 +NP NTI+DAKR IG+ F + K + F V +D G V KG PEE+ Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEI 149 Query: 485 SSMVLTKMKETAEAYL 532 V+ K++ AE L Sbjct: 150 GGYVIKKLRTMAERNL 165 Score = 76.2 bits (179), Expect = 3e-14 Identities = 40/87 (45%), Positives = 58/87 (66%) Frame = +3 Query: 471 SPRKSVPWCLRK*RKLPKLISGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIIN 650 +P + + ++K R + + TV AV++VPA F+ QR AT A +++G+ VLR+IN Sbjct: 145 TPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVIN 204 Query: 651 EPTAAAIAYGLDKKGTGERNVLIFDLG 731 EPTAAA+AYGL KK G NV++ DLG Sbjct: 205 EPTAAALAYGLHKK-EGVANVMVVDLG 230 Score = 35.9 bits (79), Expect = 0.046 Identities = 15/29 (51%), Positives = 20/29 (68%) Frame = +1 Query: 730 GGGTFDVSILTIEDGIFEVKSTAGDTHLG 816 GGGT DVS+L I+ G+F + AG+ LG Sbjct: 230 GGGTLDVSLLNIQGGMFVTMAMAGNNRLG 258 >SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) Length = 179 Score = 74.5 bits (175), Expect = 1e-13 Identities = 51/109 (46%), Positives = 63/109 (57%), Gaps = 26/109 (23%) Frame = +3 Query: 462 KPFSPRKSVPWCLRK*RKLPKLISGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN--- 632 + F+P + L + + + G+ V+ AVITVPA+FND+QRQATKDAGTI+GL+ Sbjct: 11 RSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVLS 70 Query: 633 ---------------------VLRIINEPTAAAIAYGLDKK--GTGERN 710 VLRIINEPTAAAIAYGLDK G ERN Sbjct: 71 RTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119 Score = 38.7 bits (86), Expect = 0.006 Identities = 17/35 (48%), Positives = 26/35 (74%) Frame = +2 Query: 434 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGQ 538 I V GE ++F PE++S++VL ++K AEA+LGQ Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQ 36 >SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1068 Score = 66.9 bits (156), Expect = 2e-11 Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 1/82 (1%) Frame = +2 Query: 311 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 487 N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177 Query: 488 SMVLTKMKETAEAYLGQNCAEC 553 +M+ T++K TAE L +C Sbjct: 178 AMLFTRLKTTAEIALKTKVTDC 199 Score = 62.9 bits (146), Expect = 3e-10 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 3/100 (3%) Frame = +3 Query: 456 KTKPFSPRKSVPWCLRK*RKLPKLISGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 635 K + FSP + + + + ++ V + VI+VP+Y+ D QR+ DA +GLN Sbjct: 167 KQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNC 226 Query: 636 LRIINEPTAAAIAYGLDKKG---TGERNVLIFDLGRRYLR 746 LR++N+ TA ++AYG+ K+ RNV+ D+G L+ Sbjct: 227 LRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQ 266 Score = 49.6 bits (113), Expect = 3e-06 Identities = 22/52 (42%), Positives = 33/52 (63%) Frame = +2 Query: 146 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 301 VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55 >SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1019 Score = 57.2 bits (132), Expect = 2e-08 Identities = 30/92 (32%), Positives = 55/92 (59%), Gaps = 4/92 (4%) Frame = +3 Query: 468 FSPRKSVPWCLRK*RKLPKLISGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRII 647 F+P + + L R + + + +++ V+TVP +FN ++R+A A + GLNVL+I+ Sbjct: 80 FTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLRAAELVGLNVLQIM 139 Query: 648 NEPTAAAIAYGLDKK----GTGERNVLIFDLG 731 N TA A+ YGL ++ T E++ + +D+G Sbjct: 140 NSNTAVALNYGLFQQKSFNDTLEKHFMFYDMG 171 >SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 766 Score = 50.8 bits (116), Expect = 2e-06 Identities = 21/29 (72%), Positives = 26/29 (89%) Frame = +1 Query: 730 GGGTFDVSILTIEDGIFEVKSTAGDTHLG 816 GGGTFD+SIL I+ G+FEVK+T GDT+LG Sbjct: 8 GGGTFDISILEIQKGVFEVKATNGDTYLG 36 >SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) Length = 592 Score = 41.5 bits (93), Expect = 0.001 Identities = 18/28 (64%), Positives = 22/28 (78%) Frame = +2 Query: 197 GKVEIIANDQGNRTTPSYVAFTDTERLI 280 G IIAND G+R TP+ VAF+DTE+LI Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110 >SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) Length = 212 Score = 31.1 bits (67), Expect = 1.3 Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%) Frame = +2 Query: 206 EIIANDQGNRTTPSYVAFT-DTERL 277 ++I N +G+RTTPS VAFT + ERL Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31 >SB_23942| Best HMM Match : 5-nucleotidase (HMM E-Value=4) Length = 735 Score = 30.7 bits (66), Expect = 1.7 Identities = 17/40 (42%), Positives = 20/40 (50%) Frame = +3 Query: 702 ERNVLIFDLGRRYLRRVHPYHRGWYLRGEIHRRRHPLGKV 821 +R VL FD +HP+ RGWY R E R HP V Sbjct: 521 KRAVLAFDELIMAAAGLHPFQRGWYRRCE--RFHHPFSTV 558 >SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) Length = 647 Score = 29.9 bits (64), Expect = 3.0 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = +3 Query: 684 DKKGTGERNVLIFDLGRRYLRRVHPYHRGWYLRGEIHRRRHP-LGKVRTLTSHGE 845 D+ T +R++ + DLG ++++H HR G I RR H L +V SH E Sbjct: 363 DRGMTRQRSISMHDLGHETIQKIHFRHRASISHG-IERRVHELLRQVSHSDSHTE 416 >SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) Length = 953 Score = 29.5 bits (63), Expect = 4.0 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Frame = +1 Query: 214 RQRPGQQDHSVLCCVHRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASR 384 RQ + +++ H R +R+ ++ GG +EP + R T T C+CA R Sbjct: 267 RQSAPSRSMAIINKTHGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326 >SB_31091| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 607 Score = 29.5 bits (63), Expect = 4.0 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +2 Query: 752 PSLPSRMVSSR*NPPPATPTWEGEDFDIAW 841 P++P + S+ PPP+ ++ EDFD W Sbjct: 45 PTVPIQTPSAPYQPPPSNDYYDAEDFDDDW 74 >SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) Length = 350 Score = 29.5 bits (63), Expect = 4.0 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = -1 Query: 314 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 216 GS PPG W R +AR T +T +SC PG W Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236 >SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) Length = 420 Score = 29.1 bits (62), Expect = 5.2 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -1 Query: 332 RILCCWGSSPPGSWRH 285 R++CC G SP WRH Sbjct: 395 RVVCCQGDSPSPRWRH 410 >SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) Length = 340 Score = 29.1 bits (62), Expect = 5.2 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -1 Query: 332 RILCCWGSSPPGSWRH 285 R++CC G SP WRH Sbjct: 170 RVVCCQGDSPSPRWRH 185 >SB_9053| Best HMM Match : TIG (HMM E-Value=0) Length = 2990 Score = 28.7 bits (61), Expect = 6.9 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 Query: 74 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 160 HVC +V T K K ++K PA GI+L Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228 >SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1506 Score = 28.7 bits (61), Expect = 6.9 Identities = 20/68 (29%), Positives = 32/68 (47%) Frame = -3 Query: 522 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 343 S F+F ST + +S +KV+ SPL + + P+ G S C V NL Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165 Query: 342 RLASNIVL 319 ++++ VL Sbjct: 1166 KISNATVL 1173 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 29,451,361 Number of Sequences: 59808 Number of extensions: 672197 Number of successful extensions: 2142 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 1907 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2137 length of database: 16,821,457 effective HSP length: 82 effective length of database: 11,917,201 effective search space used: 2645618622 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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