Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_H07
(1003 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22750-1|CAA80435.1| 594|Homo sapiens glutamate decarboxylase p... 38 0.076
S61898-1|AAB26938.1| 594|Homo sapiens glutamic acid decarboxyla... 38 0.076
S61897-1|AAB26937.1| 594|Homo sapiens glutamic acid decarboxyla... 38 0.076
M86522-1|AAA35900.1| 593|Homo sapiens glutamate decarboxylase p... 38 0.076
M81883-1|AAA62368.1| 594|Homo sapiens glutamate decarboxylase p... 38 0.076
L16888-1|AAB59427.1| 594|Homo sapiens glutamate decarboxylase p... 38 0.076
BC036552-1|AAH36552.1| 425|Homo sapiens GAD1 protein protein. 38 0.076
BC026349-1|AAH26349.1| 594|Homo sapiens glutamate decarboxylase... 38 0.076
AY337516-1|AAP88035.1| 594|Homo sapiens glutamate decarboxylase... 38 0.076
AC007405-1|AAY24237.1| 594|Homo sapiens unknown protein. 38 0.076
BC037780-1|AAH37780.1| 594|Homo sapiens glutamate decarboxylase... 34 0.70
M70434-1|AAA52512.1| 180|Homo sapiens glutamic acid decarboxyla... 32 3.8
M70435-1|AAA52513.1| 180|Homo sapiens glutamic acid decarboxyla... 31 5.0
>Z22750-1|CAA80435.1| 594|Homo sapiens glutamate decarboxylase
protein.
Length = 594
Score = 37.5 bits (83), Expect = 0.076
Identities = 26/94 (27%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Frame = +3
Query: 495 NTXQXTFEVXPXXXLIELXVXXXI--LXPXXXPXGDXIXSPVGIVXMXXXXXXXXXXXXP 668
NT T+E+ P L+E + + GD I SP G + P
Sbjct: 210 NTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFP 269
Query: 669 XFDTKGXXXLPEXXIXXPEDLHXSIKKTXHWLXF 770
TKG +P+ + E H SIKK L F
Sbjct: 270 EVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGF 303
>S61898-1|AAB26938.1| 594|Homo sapiens glutamic acid decarboxylase
67 kda isoform protein.
Length = 594
Score = 37.5 bits (83), Expect = 0.076
Identities = 26/94 (27%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Frame = +3
Query: 495 NTXQXTFEVXPXXXLIELXVXXXI--LXPXXXPXGDXIXSPVGIVXMXXXXXXXXXXXXP 668
NT T+E+ P L+E + + GD I SP G + P
Sbjct: 210 NTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFP 269
Query: 669 XFDTKGXXXLPEXXIXXPEDLHXSIKKTXHWLXF 770
TKG +P+ + E H SIKK L F
Sbjct: 270 EVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALCF 303
>S61897-1|AAB26937.1| 594|Homo sapiens glutamic acid decarboxylase
67 kda form protein.
Length = 594
Score = 37.5 bits (83), Expect = 0.076
Identities = 26/94 (27%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Frame = +3
Query: 495 NTXQXTFEVXPXXXLIELXVXXXI--LXPXXXPXGDXIXSPVGIVXMXXXXXXXXXXXXP 668
NT T+E+ P L+E + + GD I SP G + P
Sbjct: 210 NTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFP 269
Query: 669 XFDTKGXXXLPEXXIXXPEDLHXSIKKTXHWLXF 770
TKG +P+ + E H SIKK L F
Sbjct: 270 EVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGF 303
>M86522-1|AAA35900.1| 593|Homo sapiens glutamate decarboxylase
protein.
Length = 593
Score = 37.5 bits (83), Expect = 0.076
Identities = 26/94 (27%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Frame = +3
Query: 495 NTXQXTFEVXPXXXLIELXVXXXI--LXPXXXPXGDXIXSPVGIVXMXXXXXXXXXXXXP 668
NT T+E+ P L+E + + GD I SP G + P
Sbjct: 209 NTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFP 268
Query: 669 XFDTKGXXXLPEXXIXXPEDLHXSIKKTXHWLXF 770
TKG +P+ + E H SIKK L F
Sbjct: 269 EVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGF 302
>M81883-1|AAA62368.1| 594|Homo sapiens glutamate decarboxylase
protein.
Length = 594
Score = 37.5 bits (83), Expect = 0.076
Identities = 26/94 (27%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Frame = +3
Query: 495 NTXQXTFEVXPXXXLIELXVXXXI--LXPXXXPXGDXIXSPVGIVXMXXXXXXXXXXXXP 668
NT T+E+ P L+E + + GD I SP G + P
Sbjct: 210 NTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFP 269
Query: 669 XFDTKGXXXLPEXXIXXPEDLHXSIKKTXHWLXF 770
TKG +P+ + E H SIKK L F
Sbjct: 270 EVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGF 303
>L16888-1|AAB59427.1| 594|Homo sapiens glutamate decarboxylase
protein.
Length = 594
Score = 37.5 bits (83), Expect = 0.076
Identities = 26/94 (27%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Frame = +3
Query: 495 NTXQXTFEVXPXXXLIELXVXXXI--LXPXXXPXGDXIXSPVGIVXMXXXXXXXXXXXXP 668
NT T+E+ P L+E + + GD I SP G + P
Sbjct: 210 NTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFP 269
Query: 669 XFDTKGXXXLPEXXIXXPEDLHXSIKKTXHWLXF 770
TKG +P+ + E H SIKK L F
Sbjct: 270 EVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGF 303
>BC036552-1|AAH36552.1| 425|Homo sapiens GAD1 protein protein.
Length = 425
Score = 37.5 bits (83), Expect = 0.076
Identities = 26/94 (27%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Frame = +3
Query: 495 NTXQXTFEVXPXXXLIELXVXXXI--LXPXXXPXGDXIXSPVGIVXMXXXXXXXXXXXXP 668
NT T+E+ P L+E + + GD I SP G + P
Sbjct: 210 NTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFP 269
Query: 669 XFDTKGXXXLPEXXIXXPEDLHXSIKKTXHWLXF 770
TKG +P+ + E H SIKK L F
Sbjct: 270 EVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGF 303
>BC026349-1|AAH26349.1| 594|Homo sapiens glutamate decarboxylase 1
(brain, 67kDa) protein.
Length = 594
Score = 37.5 bits (83), Expect = 0.076
Identities = 26/94 (27%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Frame = +3
Query: 495 NTXQXTFEVXPXXXLIELXVXXXI--LXPXXXPXGDXIXSPVGIVXMXXXXXXXXXXXXP 668
NT T+E+ P L+E + + GD I SP G + P
Sbjct: 210 NTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFP 269
Query: 669 XFDTKGXXXLPEXXIXXPEDLHXSIKKTXHWLXF 770
TKG +P+ + E H SIKK L F
Sbjct: 270 EVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGF 303
>AY337516-1|AAP88035.1| 594|Homo sapiens glutamate decarboxylase 1
(brain, 67kDa) protein.
Length = 594
Score = 37.5 bits (83), Expect = 0.076
Identities = 26/94 (27%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Frame = +3
Query: 495 NTXQXTFEVXPXXXLIELXVXXXI--LXPXXXPXGDXIXSPVGIVXMXXXXXXXXXXXXP 668
NT T+E+ P L+E + + GD I SP G + P
Sbjct: 210 NTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFP 269
Query: 669 XFDTKGXXXLPEXXIXXPEDLHXSIKKTXHWLXF 770
TKG +P+ + E H SIKK L F
Sbjct: 270 EVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGF 303
>AC007405-1|AAY24237.1| 594|Homo sapiens unknown protein.
Length = 594
Score = 37.5 bits (83), Expect = 0.076
Identities = 26/94 (27%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Frame = +3
Query: 495 NTXQXTFEVXPXXXLIELXVXXXI--LXPXXXPXGDXIXSPVGIVXMXXXXXXXXXXXXP 668
NT T+E+ P L+E + + GD I SP G + P
Sbjct: 210 NTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFP 269
Query: 669 XFDTKGXXXLPEXXIXXPEDLHXSIKKTXHWLXF 770
TKG +P+ + E H SIKK L F
Sbjct: 270 EVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGF 303
>BC037780-1|AAH37780.1| 594|Homo sapiens glutamate decarboxylase 1
(brain, 67kDa) protein.
Length = 594
Score = 34.3 bits (75), Expect = 0.70
Identities = 25/94 (26%), Positives = 34/94 (36%), Gaps = 2/94 (2%)
Frame = +3
Query: 495 NTXQXTFEVXPXXXLIELXVXXXI--LXPXXXPXGDXIXSPVGIVXMXXXXXXXXXXXXP 668
NT T+E+ P L+E + + GD I SP G + P
Sbjct: 210 NTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFP 269
Query: 669 XFDTKGXXXLPEXXIXXPEDLHXSIKKTXHWLXF 770
TKG +P+ + E SIKK L F
Sbjct: 270 EVKTKGMAAVPKLVLFTSEQSRYSIKKAGAALGF 303
>M70434-1|AAA52512.1| 180|Homo sapiens glutamic acid decarboxylase
protein.
Length = 180
Score = 31.9 bits (69), Expect = 3.8
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +3
Query: 591 GDXIXSPVGIVXMXXXXXXXXXXXXPXFDTKGXXXLPEXXIXXPEDLHXSIKKTXHWLXF 770
GD I SP G + P TKG +P+ + E H SIKK L F
Sbjct: 27 GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGF 86
>M70435-1|AAA52513.1| 180|Homo sapiens glutamic acid decarboxylase
protein.
Length = 180
Score = 31.5 bits (68), Expect = 5.0
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +3
Query: 591 GDXIXSPVGIVXMXXXXXXXXXXXXPXFDTKGXXXLPEXXIXXPEDLHXSIKKTXHWLXF 770
GD I SP G + P TKG +P+ + E H SIKK L F
Sbjct: 27 GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEHSHYSIKKAGAALGF 86
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,364,894
Number of Sequences: 237096
Number of extensions: 453739
Number of successful extensions: 250
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13378564892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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