Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_H06
         (893 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   0.80 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   3.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   5.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   7.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   7.5  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 15/67 (22%), Positives = 30/67 (44%)
 Frame = -3

Query: 603 ATEPYFTCF*YHIPKNYFCVL*SRYQTVSLVIKLQASNSRFVSSKYTNYFIVGEFKYINI 424
           A + YF  +  +      C+   +Y+ ++L++  Q  N RF + K     +V   K +N+
Sbjct: 149 AVQLYFQFYYTYFLCVIVCIFRGKYRNINLLLTEQLQNRRFFAKKMEG--LVCSIKELNM 206

Query: 423 SIKQTNG 403
              +  G
Sbjct: 207 IFNEFFG 213


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 483 FVSSKYTNYFIVGE 442
           FVS KYTNY  V E
Sbjct: 232 FVSHKYTNYSAVQE 245


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 501 QASNSRFVSSKYTNYFIV 448
           Q   + FVS KYTNY  V
Sbjct: 218 QIRGTFFVSHKYTNYSAV 235


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 501 QASNSRFVSSKYTNYFIV 448
           Q   + FVS KYTNY  V
Sbjct: 225 QIRGTFFVSHKYTNYSAV 242


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 298 VHMLQQRCIYH*YHSMLHVC 239
           VH+L   CIY+ Y+  L  C
Sbjct: 250 VHLLLLVCIYYFYYMHLLFC 269


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -1

Query: 326 PSFMSQIITCSHAPTAMYLPLI 261
           PS+ +Q ++C+H     Y+ ++
Sbjct: 362 PSYYNQDVSCTHYQNPEYISVV 383


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,935
Number of Sequences: 336
Number of extensions: 5353
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)