Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_H06
(893 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 171 7e-43
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 83 2e-16
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 82 4e-16
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 82 4e-16
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 81 7e-16
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 81 1e-15
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 80 2e-15
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 79 4e-15
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 79 5e-15
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 79 5e-15
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 75 6e-14
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 75 8e-14
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 73 2e-13
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 73 3e-13
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 73 3e-13
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 72 5e-13
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 72 6e-13
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 71 1e-12
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 71 1e-12
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 71 1e-12
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 71 1e-12
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 70 2e-12
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 69 6e-12
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 67 1e-11
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 67 2e-11
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 66 3e-11
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 66 3e-11
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 66 4e-11
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 65 5e-11
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 65 5e-11
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 65 7e-11
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 63 3e-10
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 62 4e-10
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 62 6e-10
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 62 6e-10
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 61 8e-10
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 61 8e-10
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 61 8e-10
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 61 8e-10
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 60 1e-09
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 60 2e-09
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 60 3e-09
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 59 3e-09
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 59 3e-09
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 59 3e-09
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 58 8e-09
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 58 8e-09
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 57 2e-08
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 57 2e-08
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 57 2e-08
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 56 2e-08
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 56 3e-08
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 56 3e-08
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 56 4e-08
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 55 7e-08
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 55 7e-08
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 55 7e-08
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 55 7e-08
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 55 7e-08
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 55 7e-08
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 55 7e-08
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 54 1e-07
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 54 2e-07
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 53 3e-07
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 52 4e-07
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 52 4e-07
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 52 5e-07
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 52 7e-07
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 51 9e-07
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 51 1e-06
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 51 1e-06
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 50 2e-06
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 50 2e-06
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 50 2e-06
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 50 2e-06
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 50 2e-06
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 50 2e-06
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 50 3e-06
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 50 3e-06
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 50 3e-06
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 49 4e-06
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 49 4e-06
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 49 4e-06
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 49 4e-06
At4g31160.1 68417.m04423 transducin family protein / WD-40 repea... 49 5e-06
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 49 5e-06
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 48 6e-06
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 48 6e-06
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 48 6e-06
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 48 1e-05
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 48 1e-05
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 48 1e-05
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 47 1e-05
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 47 1e-05
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 47 1e-05
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 47 1e-05
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 47 2e-05
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 47 2e-05
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 47 2e-05
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 47 2e-05
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 46 3e-05
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 46 3e-05
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 46 3e-05
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 46 3e-05
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 46 3e-05
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 46 4e-05
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 45 6e-05
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 45 6e-05
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 45 8e-05
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 45 8e-05
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 45 8e-05
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 45 8e-05
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 44 1e-04
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 44 1e-04
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 44 1e-04
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 44 2e-04
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 44 2e-04
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 44 2e-04
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 44 2e-04
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 44 2e-04
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 44 2e-04
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 43 2e-04
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 43 2e-04
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 43 2e-04
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 43 2e-04
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 43 2e-04
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 43 3e-04
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 43 3e-04
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 42 4e-04
At1g08190.1 68414.m00905 vacuolar assembly protein, putative (VP... 42 4e-04
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 42 6e-04
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 42 6e-04
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 42 6e-04
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 42 6e-04
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 42 7e-04
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 42 7e-04
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 42 7e-04
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 42 7e-04
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 42 7e-04
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 42 7e-04
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 42 7e-04
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 42 7e-04
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 41 0.001
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 41 0.001
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 41 0.001
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 41 0.001
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 41 0.001
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 41 0.001
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 41 0.001
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 40 0.002
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 40 0.002
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 40 0.002
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 40 0.002
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 40 0.002
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 40 0.003
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 40 0.003
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 40 0.003
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 40 0.003
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 40 0.003
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 40 0.003
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 39 0.004
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 39 0.004
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 39 0.004
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 39 0.004
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 38 0.007
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 38 0.007
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 38 0.007
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 38 0.007
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 38 0.007
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 38 0.009
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 38 0.009
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 38 0.012
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 38 0.012
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 38 0.012
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 38 0.012
At5g54730.1 68418.m06815 expressed protein 36 0.036
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 36 0.036
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 36 0.036
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 36 0.036
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 36 0.036
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 36 0.036
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 36 0.048
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 36 0.048
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 36 0.048
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 36 0.048
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 36 0.048
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 36 0.048
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 35 0.084
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 35 0.084
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 33 0.19
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 33 0.19
At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat fam... 33 0.19
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 33 0.19
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 33 0.26
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 33 0.34
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 33 0.34
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 33 0.34
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 33 0.34
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 32 0.45
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 32 0.45
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 32 0.45
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 31 0.78
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 31 0.78
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 31 1.0
At4g28380.1 68417.m04062 leucine-rich repeat family protein cont... 30 1.8
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 30 1.8
At3g55720.1 68416.m06190 expressed protein contains Pfam profile... 30 1.8
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 30 1.8
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 30 2.4
At5g05570.1 68418.m00605 transducin family protein / WD-40 repea... 29 3.1
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 29 3.1
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 29 4.2
At3g01550.1 68416.m00085 triose phosphate/phosphate translocator... 29 4.2
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 29 4.2
At5g23630.1 68418.m02771 ATPase E1-E2 type family protein / halo... 29 5.5
At4g20380.3 68417.m02976 zinc finger protein (LSD1) identical to... 29 5.5
At4g20380.2 68417.m02974 zinc finger protein (LSD1) identical to... 29 5.5
At4g20380.1 68417.m02975 zinc finger protein (LSD1) identical to... 29 5.5
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 29 5.5
At1g17680.2 68414.m02189 transcription factor-related low simila... 29 5.5
At1g17680.1 68414.m02188 transcription factor-related low simila... 29 5.5
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 28 7.3
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 28 9.6
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 28 9.6
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 28 9.6
At2g22770.1 68415.m02701 basic helix-loop-helix (bHLH) family pr... 28 9.6
At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containi... 28 9.6
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 171 bits (415), Expect = 7e-43
Identities = 86/222 (38%), Positives = 133/222 (59%), Gaps = 6/222 (2%)
Frame = +1
Query: 169 LTKQYLRYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVIIWDMKLGEKAQVLP 348
+ K Y RY SF +I+S D N + + +G+Y+ A E V IW ++ G ++ L
Sbjct: 1 MVKAYQRYDAATSFGVISSVDSNIAYDS----TGKYVLAPALEKVGIWHVRQGVCSKTLT 56
Query: 349 ------GENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFD 510
G ++ VT +A+S + + +AVG DG+I +++ F HK A+T L+++
Sbjct: 57 PSSSRGGPSLAVTSIASSAS-SLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYN 115
Query: 511 DQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFW 690
G L SGSKD ++ILWDV+ E+G R GH+ +T + F++G +V+SSKD F++ W
Sbjct: 116 KVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVW 175
Query: 691 DIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
D+ET+HC + + GH EVW+ EERY+VTGS DQELR +
Sbjct: 176 DLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFY 217
Score = 95.1 bits (226), Expect = 6e-20
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 12/193 (6%)
Frame = +1
Query: 274 YIAVGACEHVIIWD----MKLGEKAQVLPGENVV-------VTQLAASPTGNHMAVGLFD 420
++ V A V W+ K G+ + L NV V +A SP H+AV L D
Sbjct: 502 FVTVSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLD 561
Query: 421 GNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDV-ISETGKVRF 597
+ VF + + + GHK + C+ G +V+GS+D + +W + + K F
Sbjct: 562 STVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIF 621
Query: 598 SGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERY 777
+ H + V F+ + + + KD VK+WD + TL GH E+W + +
Sbjct: 622 A-HGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDF 680
Query: 778 LVTGSMDQELRVW 816
LVTGS D+ +R W
Sbjct: 681 LVTGSHDRSMRRW 693
Score = 63.3 bits (147), Expect = 2e-10
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 1/142 (0%)
Frame = +1
Query: 277 IAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNN 453
+AVG + I IWD + G VT L + G+ +A G D +I ++++
Sbjct: 79 VAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGE 138
Query: 454 EVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSF 633
+ GH+ +T L F D G +LVS SKD + +WD+ ++ SGH + SV
Sbjct: 139 SGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDT 198
Query: 634 INGKNCIVTSSKDTFVKFWDIE 699
+ +VT S D ++F+ ++
Sbjct: 199 DPEERYVVTGSADQELRFYAVK 220
Score = 61.7 bits (143), Expect = 6e-10
Identities = 31/96 (32%), Positives = 50/96 (52%)
Frame = +1
Query: 535 GSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCF 714
G D + +WD T +V F+ HKG +T++ + + + + SKD + WD+ +
Sbjct: 82 GYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGL 141
Query: 715 KTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
L GH+ +V V L + LV+ S D+ LRVW L
Sbjct: 142 FRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDL 177
Score = 41.5 bits (93), Expect = 7e-04
Identities = 29/117 (24%), Positives = 47/117 (40%)
Frame = +1
Query: 343 LPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGH 522
L G + V + S G + G D N+ ++ L + H ++ ++F H
Sbjct: 578 LYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTH 637
Query: 523 RLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWD 693
L S KD V WD + GH I ++ N + +VT S D ++ WD
Sbjct: 638 YLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
Score = 38.7 bits (86), Expect = 0.005
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Frame = +1
Query: 385 PTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILW 564
P + VG G + + ++ + V H I + V+ S D EV W
Sbjct: 455 PQNKYGIVGTKSGVLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFW 514
Query: 565 D--VISETGK----VRFSGHKGV-----ITSVSFINGKNCIVTSSKDTFVKFWDIETKHC 711
+ V ++GK + S K + + +V+ I + D+ VK + +++
Sbjct: 515 EYQVKQKSGKATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKF 574
Query: 712 FKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNW 828
+ +L GH++ V + + +VTGS D+ L++W L++
Sbjct: 575 YLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDF 613
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 83.4 bits (197), Expect = 2e-16
Identities = 43/152 (28%), Positives = 70/152 (46%)
Frame = +1
Query: 247 VTLNGISGRYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGN 426
VT + G A A + +WD++ + + L G + P G A G D N
Sbjct: 158 VTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTN 217
Query: 427 INVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGH 606
+ ++++ + + GH + L+F G +VSG +D V +WD+ + F H
Sbjct: 218 LKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSH 277
Query: 607 KGVITSVSFINGKNCIVTSSKDTFVKFWDIET 702
+G I S+ F + + T S D VKFWD+ET
Sbjct: 278 EGKIQSLDFHPHEFLLATGSADKTVKFWDLET 309
Score = 75.8 bits (178), Expect = 4e-14
Identities = 52/231 (22%), Positives = 93/231 (40%), Gaps = 4/231 (1%)
Frame = +1
Query: 154 VSSMGLTKQY---LRYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVI-IWDMK 321
VS+M + Y + ++ SF + + + S R + G +H + +W +
Sbjct: 81 VSAMNTKRAYKLRILFSLISSFREFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIG 140
Query: 322 LGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCL 501
L G + + + + +A G G I +++L +VV GH+S +
Sbjct: 141 KPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSV 200
Query: 502 QFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFV 681
F G SGS DT + +WD+ + + GH + + F IV+ +D V
Sbjct: 201 NFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVV 260
Query: 682 KFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTE 834
K WD+ H+ ++ + E L TGS D+ ++ W L E
Sbjct: 261 KVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFE 311
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Frame = +1
Query: 556 ILWDVISETGKVRFSGHKGVITSVSF-INGKNCIVTSSKDTFVKFWDIETKHCFKTLGGH 732
IL+ +IS + F H + + +VT +D V W I + +L GH
Sbjct: 94 ILFSLISSFRE--FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGH 151
Query: 733 QMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTEDVK 843
+ + E + G+ +++W L + V+
Sbjct: 152 SSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVR 188
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 82.2 bits (194), Expect = 4e-16
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Frame = +1
Query: 277 IAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNN 453
+A GA I +WD++ + + L G + P G A G D N+ ++++
Sbjct: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
Query: 454 EVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSF 633
+ + GH + L+F G +VSG +D V +WD+ + F H+G I S+ F
Sbjct: 134 GCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDF 193
Query: 634 INGKNCIVTSSKDTFVKFWDIET 702
+ + T S D VKFWD+ET
Sbjct: 194 HPHEFLLATGSADRTVKFWDLET 216
Score = 73.7 bits (173), Expect = 1e-13
Identities = 44/191 (23%), Positives = 79/191 (41%), Gaps = 1/191 (0%)
Frame = +1
Query: 265 SGRYIAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFE 441
S R + G +H + +W + L G + + + + +A G G I +++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD 87
Query: 442 LTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT 621
L ++V GH+S + F G SGS DT + +WD+ + + GH +
Sbjct: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
Query: 622 SVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQ 801
+ F +V+ +D VK WD+ H+ ++ + E L TGS D+
Sbjct: 148 VLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADR 207
Query: 802 ELRVWKLNWTE 834
++ W L E
Sbjct: 208 TVKFWDLETFE 218
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 82.2 bits (194), Expect = 4e-16
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Frame = +1
Query: 277 IAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNN 453
+A GA I +WD++ + + L G + P G A G D N+ ++++
Sbjct: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
Query: 454 EVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSF 633
+ + GH + L+F G +VSG +D V +WD+ + F H+G I S+ F
Sbjct: 134 GCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDF 193
Query: 634 INGKNCIVTSSKDTFVKFWDIET 702
+ + T S D VKFWD+ET
Sbjct: 194 HPHEFLLATGSADRTVKFWDLET 216
Score = 73.7 bits (173), Expect = 1e-13
Identities = 44/191 (23%), Positives = 79/191 (41%), Gaps = 1/191 (0%)
Frame = +1
Query: 265 SGRYIAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFE 441
S R + G +H + +W + L G + + + + +A G G I +++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD 87
Query: 442 LTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT 621
L ++V GH+S + F G SGS DT + +WD+ + + GH +
Sbjct: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
Query: 622 SVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQ 801
+ F +V+ +D VK WD+ H+ ++ + E L TGS D+
Sbjct: 148 VLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADR 207
Query: 802 ELRVWKLNWTE 834
++ W L E
Sbjct: 208 TVKFWDLETFE 218
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 81.4 bits (192), Expect = 7e-16
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 1/179 (0%)
Frame = +1
Query: 265 SGRYIAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFE 441
S + G+ + I IWD+ G L G V LA S +M D + ++
Sbjct: 187 SNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWD 246
Query: 442 LTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT 621
L N+V+ + GH S + CL L++G +D+ +WD+ ++ SGH +
Sbjct: 247 LEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVC 306
Query: 622 SVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMD 798
SV +VT S DT +KFWD+ TL H+ V A L +E + S D
Sbjct: 307 SVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASAD 365
Score = 62.5 bits (145), Expect = 4e-10
Identities = 36/164 (21%), Positives = 67/164 (40%)
Frame = +1
Query: 337 QVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQ 516
+V+ G V +A P+ G D I ++++ + GH + L ++
Sbjct: 170 RVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNR 229
Query: 517 GHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDI 696
+ S D +V WD+ + GH + ++ + ++T +D+ + WDI
Sbjct: 230 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDI 289
Query: 697 ETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNW 828
TK L GH V + + +VTGS D ++ W L +
Sbjct: 290 RTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRY 333
Score = 51.6 bits (118), Expect = 7e-07
Identities = 38/179 (21%), Positives = 76/179 (42%)
Frame = +1
Query: 280 AVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEV 459
+ G + V WD++ + + G V LA PT + + G D V+++
Sbjct: 235 SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQ 294
Query: 460 VCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFIN 639
+ +GH + + + ++V+GS DT + WD+ + HK + +++
Sbjct: 295 IFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHP 354
Query: 640 GKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
+N ++S D KF + + C L Q + A+ + E+ +VTG + + W
Sbjct: 355 KENAFASASADNTKKFSLPKGEFCHNML-SQQKTIINAMAVNEDGVMVTGGDNGSIWFW 412
Score = 48.0 bits (109), Expect = 8e-06
Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 8/179 (4%)
Frame = +1
Query: 307 IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKS 486
+WD++ + L G + V + PT + G D I ++L + + HK
Sbjct: 286 VWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKK 345
Query: 487 AITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSS 666
++ + + + S S D E S K +I +++ +N +VT
Sbjct: 346 SVRAMTLHPKENAFASASADNTKKFSLPKGEFCHNMLSQQKTIINAMA-VNEDGVMVTGG 404
Query: 667 KDTFVKFWDIETKHCF---KTL---GGHQME--VWAAVLLKEERYLVTGSMDQELRVWK 819
+ + FWD ++ H F +T+ G + E ++AA LVT D+ +++WK
Sbjct: 405 DNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMWK 463
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +1
Query: 601 GHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYL 780
GH G + SV+F T S D +K WD+ T TL GH +V + Y+
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYM 233
Query: 781 VTGSMDQELRVWKLNWTEDVK 843
+ D++++ W L + ++
Sbjct: 234 FSAGDDKQVKCWDLEQNKVIR 254
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 80.6 bits (190), Expect = 1e-15
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 4/184 (2%)
Frame = +1
Query: 277 IAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNN 453
+ GA VI +WD++ + + G + + P G +A G D N+ ++++
Sbjct: 73 VLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKK 132
Query: 454 EVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSF 633
+ + GH I+ ++F G +VSG D V +WD+ + F H+G I S+ F
Sbjct: 133 GCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDF 192
Query: 634 INGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLK---EERYLVTGSMDQE 804
+ + T S D VKFWD+ET F+ +G + E +K + R L G +D
Sbjct: 193 HPLEFLLATGSADRTVKFWDLET---FELIGSTRPEATGVRSIKFHPDGRTLFCG-LDDS 248
Query: 805 LRVW 816
L+V+
Sbjct: 249 LKVY 252
Score = 74.9 bits (176), Expect = 6e-14
Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Frame = +1
Query: 319 KLGEKAQVLPGENVVVTQLA-ASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAIT 495
K G K Q + V L+ T G D +N++ + + GH SA+
Sbjct: 3 KRGYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVD 62
Query: 496 CLQFDDQGHRLVSGSKDTEVILWDVISETGKVR-FSGHKGVITSVSFINGKNCIVTSSKD 672
+ FD +++G+ + LWDV E VR F+GH+ ++V F + + S D
Sbjct: 63 SVAFDSAEVLVLAGASSGVIKLWDV-EEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSD 121
Query: 673 TFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
+K WDI K C +T GH + + R++V+G +D ++VW L
Sbjct: 122 ANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDL 171
Score = 70.9 bits (166), Expect = 1e-12
Identities = 45/187 (24%), Positives = 77/187 (41%)
Frame = +1
Query: 274 YIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNN 453
+I G V +W + L G V +A + G G I ++++
Sbjct: 31 FITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEA 90
Query: 454 EVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSF 633
++V F GH+S + ++F G L SGS D + +WD+ + + GH I+++ F
Sbjct: 91 KMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRF 150
Query: 634 INGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRV 813
+V+ D VK WD+ H+ + + E L TGS D+ ++
Sbjct: 151 TPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKF 210
Query: 814 WKLNWTE 834
W L E
Sbjct: 211 WDLETFE 217
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 80.2 bits (189), Expect = 2e-15
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Frame = +1
Query: 322 LGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCL 501
+ E Q G ++ +A S + D + ++++ ++ GH + C+
Sbjct: 60 IAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCV 119
Query: 502 QFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFV 681
F+ Q + +VSGS D V +WDV + H +T+V F + IV+SS D
Sbjct: 120 NFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLC 179
Query: 682 KFWDIETKHCFKTLGGHQMEVWAAVLLKEE-RYLVTGSMDQELRVWKLNWTEDVK 843
+ WD T HC KTL + + V ++++ G++D LR+W ++ + +K
Sbjct: 180 RIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLK 234
Score = 77.0 bits (181), Expect = 2e-14
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 5/195 (2%)
Frame = +1
Query: 247 VTLNGISGRYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGN 426
V N S ++ E V IWD+ G+ +VLP + VT + + G+ + +DG
Sbjct: 119 VNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGL 178
Query: 427 INVFEL-TNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSG 603
+++ T + V + ++ ++F G ++ G+ D + LW++ S ++G
Sbjct: 179 CRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTG 238
Query: 604 HKG----VITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEE 771
H + ++ S NGK IV+ S+D V W++ +K + L GH V E
Sbjct: 239 HVNAQYCISSAFSVTNGKR-IVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTE 297
Query: 772 RYLVTGSMDQELRVW 816
+ +GS+D+ +R+W
Sbjct: 298 NLIASGSLDKTVRIW 312
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 79.0 bits (186), Expect = 4e-15
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Frame = +1
Query: 277 IAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNN 453
+ GA VI +WD++ + + G + + P G +A G D N+ V++
Sbjct: 22 VLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKK 81
Query: 454 EVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSF 633
+ + GH I+ ++F G +VSG D V +WD+ + F H+G I S+ F
Sbjct: 82 GCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDF 141
Query: 634 INGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRV 813
+ + T S D VKFWD+ET T V A + + L G +D L+V
Sbjct: 142 HPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCG-LDDGLKV 200
Query: 814 W 816
+
Sbjct: 201 Y 201
Score = 70.5 bits (165), Expect = 1e-12
Identities = 39/142 (27%), Positives = 65/142 (45%)
Frame = +1
Query: 409 GLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGK 588
G G I +++L +++V F GH+S + ++F G L SGS DT + +WD +
Sbjct: 25 GASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCI 84
Query: 589 VRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKE 768
+ GH I+++ F +V+ D VK WD+ H+ + +
Sbjct: 85 QTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPL 144
Query: 769 ERYLVTGSMDQELRVWKLNWTE 834
E L TGS D+ ++ W L E
Sbjct: 145 EFLLATGSADRTVKFWDLETFE 166
Score = 66.1 bits (154), Expect = 3e-11
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVR-FSGHKGVITSVSFINGKNC 651
GH S + + F+ + +++G+ + LWD + E+ VR F+GH+ ++V F
Sbjct: 5 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWD-LEESKMVRAFTGHRSNCSAVEFHPFGEF 63
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
+ + S DT ++ WD K C +T GH + + R++V+G +D ++VW L
Sbjct: 64 LASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL 120
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 78.6 bits (185), Expect = 5e-15
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +1
Query: 274 YIAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTN 450
YIA G+ + + +WD++ GE ++ G +V LA SP G +MA G DG I +++L+
Sbjct: 513 YIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLST 572
Query: 451 NEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISET 582
+ GH S + L + +G L SGS D V LWDV S T
Sbjct: 573 ARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSST 616
Score = 77.0 bits (181), Expect = 2e-14
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 3/186 (1%)
Frame = +1
Query: 268 GRYIAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFEL 444
G ++ + + I +W KL G N V SP G++ A D ++ +
Sbjct: 430 GDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSM 489
Query: 445 TNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGK-VR-FSGHKGVI 618
+ + + AGH S + + + + +GS D V LWDV +TG+ VR F GH+ ++
Sbjct: 490 DRIQPLRIMAGHLSDV---DWHPNCNYIATGSSDKTVRLWDV--QTGECVRIFIGHRSMV 544
Query: 619 TSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMD 798
S++ + + +D + WD+ T C L GH VW+ E L +GS D
Sbjct: 545 LSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSAD 604
Query: 799 QELRVW 816
+++W
Sbjct: 605 CTVKLW 610
Score = 70.5 bits (165), Expect = 1e-12
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Frame = +1
Query: 268 GRYIAVGACEH---VIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVF 438
G Y A +C H IW M + +++ G ++ + P N++A G D + ++
Sbjct: 472 GHYFA--SCSHDRTARIWSMDRIQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLW 526
Query: 439 ELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVI 618
++ E V +F GH+S + L G + SG +D +++WD+ + GH +
Sbjct: 527 DVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCV 586
Query: 619 TSVSFINGKNCIVTSSKDTFVKFWDI 696
S+S+ + + + S D VK WD+
Sbjct: 587 WSLSYSGEGSLLASGSADCTVKLWDV 612
Score = 67.3 bits (157), Expect = 1e-11
Identities = 41/162 (25%), Positives = 69/162 (42%)
Frame = +1
Query: 340 VLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQG 519
+L G + V SP G+ + D I ++ N + + GH + QF G
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFG 472
Query: 520 HRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIE 699
H S S D +W + +GH ++ V + N I T S D V+ WD++
Sbjct: 473 HYFASCSHDRTARIWSMDRIQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQ 529
Query: 700 TKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
T C + GH+ V + + + RY+ +G D + +W L+
Sbjct: 530 TGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLS 571
Score = 50.8 bits (116), Expect = 1e-06
Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCI 654
GH + F G ++S S DT + LW V + GH + F +
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYF 475
Query: 655 VTSSKDTFVKFWDIETKHCFKTLGGHQMEV-WAAVLLKEERYLVTGSMDQELRVWKLNWT 831
+ S D + W ++ + + GH +V W Y+ TGS D+ +R+W +
Sbjct: 476 ASCSHDRTARIWSMDRIQPLRIMAGHLSDVDWHPNC----NYIATGSSDKTVRLWDVQTG 531
Query: 832 EDVK 843
E V+
Sbjct: 532 ECVR 535
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 78.6 bits (185), Expect = 5e-15
Identities = 43/176 (24%), Positives = 78/176 (44%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
+ +A + + + G D +++ L + V GHK I ++F +++ S
Sbjct: 502 INSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASG 561
Query: 544 DTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTL 723
D V +W + + F GH + SFI V+ D +K W++ T C T
Sbjct: 562 DKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATY 621
Query: 724 GGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTEDVKDDDXLKHQLEIVKLEE 891
H+ +VWA + K+ + TG D + +W + D K+DD K + I++ +E
Sbjct: 622 DQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASD-KEDDFRKEEEAILRGQE 676
Score = 74.1 bits (174), Expect = 1e-13
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 6/192 (3%)
Frame = +1
Query: 268 GRYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELT 447
G +IA + + I D + GE+ +T LA SP + I V++L
Sbjct: 31 GSFIACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLE 90
Query: 448 NNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSV 627
+ + + GH+ + + G L + D +V++WDV F GHKGV++S+
Sbjct: 91 TLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSI 150
Query: 628 SF--INGKNCIVTSSKDTFVKFWDIETKH----CFKTLGGHQMEVWAAVLLKEERYLVTG 789
F + KN +++ S D V+ WD+ K+ C + H V + L ++ L +
Sbjct: 151 LFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSA 210
Query: 790 SMDQELRVWKLN 825
D+ + +W L+
Sbjct: 211 GRDKVVNLWDLH 222
Score = 66.5 bits (155), Expect = 2e-11
Identities = 40/138 (28%), Positives = 58/138 (42%)
Frame = +1
Query: 439 ELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVI 618
E N + V A H I + + +GS+D +W + V GHK I
Sbjct: 485 EPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRI 544
Query: 619 TSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMD 798
SV F C++T+S D VK W I C KT GH V A + + V+ D
Sbjct: 545 FSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGAD 604
Query: 799 QELRVWKLNWTEDVKDDD 852
L++W +N +E + D
Sbjct: 605 GLLKLWNVNTSECIATYD 622
Score = 60.5 bits (140), Expect = 1e-09
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Frame = +1
Query: 475 GHKSAITCLQF-DDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFI---NG 642
G+ I ++F D+ L + EV ++DV + + +GHK V+ S+ +G
Sbjct: 356 GYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSG 415
Query: 643 KNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEE-RYLVTGSMDQELRVWK 819
IVT SKD V+ W+ +K C GH ++ A K+ + V+GS D+ L+VW
Sbjct: 416 NVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWS 475
Query: 820 LNW-TEDVKDDDXLK 861
L+ +ED ++ LK
Sbjct: 476 LDGISEDSEEPINLK 490
Score = 55.6 bits (128), Expect = 4e-08
Identities = 33/159 (20%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Frame = +1
Query: 280 AVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEV 459
+ G + +WD++ + + G V +A +G +A D + V+++
Sbjct: 77 SAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFC 136
Query: 460 VCVFAGHKSAITCLQF--DDQGHRLVSGSKDTEVILWDVISETGKVR----FSGHKGVIT 621
F GHK ++ + F D + L+SGS D V +WD+ ++ + + H +T
Sbjct: 137 THYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVT 196
Query: 622 SVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQM 738
S++ + ++ +D V WD+ C T+ +++
Sbjct: 197 SIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEV 235
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 74.9 bits (176), Expect = 6e-14
Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCI 654
GH +AI+C++F + G+ L S S D +ILW + + R+ GH I+ +++ + +
Sbjct: 41 GHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYT 100
Query: 655 VTSSKDTFVKFWDIETKH-CFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
++S D ++ WD + + C K L GH V+ +V+GS D+ +R+W++
Sbjct: 101 CSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEV 157
Score = 74.5 bits (175), Expect = 8e-14
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 2/162 (1%)
Frame = +1
Query: 337 QVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQ 516
+ L G ++ + S GN +A D + ++ TN ++ + GH S I+ L +
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSD 96
Query: 517 GHRLVSGSKDTEVILWDVIS--ETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFW 690
H S S D + +WD S E KV GH + V+F N IV+ S D ++ W
Sbjct: 97 SHYTCSASDDCTLRIWDARSPYECLKV-LRGHTNFVFCVNFNPPSNLIVSGSFDETIRIW 155
Query: 691 DIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
+++T C + + H M + + ++ +V+ S D ++W
Sbjct: 156 EVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW 197
Score = 61.3 bits (142), Expect = 8e-10
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 5/177 (2%)
Frame = +1
Query: 307 IWDMKLG-EKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHK 483
IWD + E +VL G V + +P N + G FD I ++E+ + V + H
Sbjct: 111 IWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Query: 484 SAITCLQFDDQGHRLVSGSKDTEVILWDVISETG-KVRFSGHKGVITSVSFINGKNCIVT 660
I+ + F+ G +VS S D +WD T K ++ F I+
Sbjct: 171 MPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILV 230
Query: 661 SSKDTFVKFWDIETKHCFKTLGGHQMEVW---AAVLLKEERYLVTGSMDQELRVWKL 822
++ D+ +K + T K GH +V+ +A + +Y+V+GS D + +W L
Sbjct: 231 ATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDL 287
Score = 60.9 bits (141), Expect = 1e-09
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Frame = +1
Query: 301 VIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNN-EVVCVFAG 477
+I+W G + ++ LA S ++ D + +++ + E + V G
Sbjct: 67 MILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRG 126
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGK-VRF-SGHKGVITSVSFINGKNC 651
H + + C+ F+ + +VSGS D + +W+V +TGK VR H I+SV F +
Sbjct: 127 HTNFVFCVNFNPPSNLIVSGSFDETIRIWEV--KTGKCVRMIKAHSMPISSVHFNRDGSL 184
Query: 652 IVTSSKDTFVKFWDIETKHCFKTL-GGHQMEVWAAVLLKEERYLVTGSMDQELRV 813
IV++S D K WD + C KTL V A ++++ ++D L++
Sbjct: 185 IVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKL 239
Score = 56.0 bits (129), Expect = 3e-08
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 6/141 (4%)
Frame = +1
Query: 286 GACEHVIIWDMKLGEKAQVLPGENVVVTQLAA-SPTGNHMAVGLFDGNINVFELTNNEVV 462
G+C+ IWD K G + L + A SP G + V D + + + +
Sbjct: 192 GSCK---IWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFL 248
Query: 463 CVFAGHKSAITCLQ--FD-DQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSF 633
V+ GH + + C+ F G +VSGS+D V LWD+ + R GH + SVS
Sbjct: 249 KVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSC 308
Query: 634 INGKNCIVTSSK--DTFVKFW 690
+N I +S D ++ W
Sbjct: 309 HPVQNEISSSGNHLDKTIRIW 329
Score = 53.6 bits (123), Expect = 2e-07
Identities = 40/198 (20%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Frame = +1
Query: 247 VTLNGISGRYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGN 426
V N S ++ E + IW++K G+ +++ ++ ++ + + G+ + DG+
Sbjct: 134 VNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGS 193
Query: 427 INVFELTNNEVVCVFAGHKS-AITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSG 603
+++ + KS A++ +F G ++ + D+ + L + + ++G
Sbjct: 194 CKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTG 253
Query: 604 HKG----VITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVL--LK 765
H + ++ S NGK IV+ S+D V WD++ ++ + L GH V + ++
Sbjct: 254 HTNKVFCITSAFSVTNGKY-IVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQ 312
Query: 766 EERYLVTGSMDQELRVWK 819
E +D+ +R+WK
Sbjct: 313 NEISSSGNHLDKTIRIWK 330
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 74.5 bits (175), Expect = 8e-14
Identities = 42/149 (28%), Positives = 71/149 (47%)
Frame = +1
Query: 286 GACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVC 465
G + +W + G+ A LPG V+ LA S G +A G DG + +F+ ++ + C
Sbjct: 90 GGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKC 149
Query: 466 VFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGK 645
V G + I +++ +GH +++GS+D + +W+ E FSGH +T F
Sbjct: 150 VLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDG 209
Query: 646 NCIVTSSKDTFVKFWDIETKHCFKTLGGH 732
I T S D + W+ +T + GH
Sbjct: 210 KLICTGSDDASLIVWNPKTCESIHIVKGH 238
Score = 68.1 bits (159), Expect = 7e-12
Identities = 44/191 (23%), Positives = 87/191 (45%), Gaps = 7/191 (3%)
Frame = +1
Query: 268 GRYIAVGACE-HVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAV---GLFDGNINV 435
G+ I G+ + +I+W+ K E ++ G L ++ ++ G DG++++
Sbjct: 209 GKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHI 268
Query: 436 FELTNNEVVCVFAGHKSAITCLQFDDQGHRL---VSGSKDTEVILWDVISETGKVRFSGH 606
+ +VV H ++ C++F + +G D ++I+WD+ T +
Sbjct: 269 VNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICEHE 328
Query: 607 KGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVT 786
+GV TS+++I + T + V WD +C T GHQ V A + ++V+
Sbjct: 329 EGV-TSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVS 387
Query: 787 GSMDQELRVWK 819
S+D RV++
Sbjct: 388 VSVDNTARVFE 398
Score = 64.9 bits (151), Expect = 7e-11
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 1/157 (0%)
Frame = +1
Query: 373 LAASPT-GNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDT 549
LA SPT +A G D ++++ N + GHK +++CL F G L SG D
Sbjct: 76 LACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDG 135
Query: 550 EVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGG 729
V ++D S T K G I V + + ++ S+D + W+ + + G
Sbjct: 136 VVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSG 195
Query: 730 HQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTEDV 840
H + V + + + TGS D L VW E +
Sbjct: 196 HNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESI 232
Score = 57.2 bits (132), Expect = 1e-08
Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 7/192 (3%)
Frame = +1
Query: 268 GRYIAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFEL 444
G+ +A G + V+ I+D G VL G + + P G+ + G D ++ ++
Sbjct: 125 GQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNA 184
Query: 445 TNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHK---GV 615
+ +F+GH +TC F G + +GS D +I+W+ + GH
Sbjct: 185 DKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEG 244
Query: 616 ITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYL---VT 786
+T + + + ++ SKD V +I T +L H V + T
Sbjct: 245 LTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAAT 304
Query: 787 GSMDQELRVWKL 822
G MD++L +W L
Sbjct: 305 GGMDKKLIIWDL 316
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 73.3 bits (172), Expect = 2e-13
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 6/168 (3%)
Frame = +1
Query: 334 AQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDD 513
+Q + G V ++ SP G +A G D + +++L + GHK+ + + +
Sbjct: 102 SQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSP 161
Query: 514 QGHRLVSGSKDTEVILWD-VISETGKVRFSGHKGVITSVSFIN---GKNC--IVTSSKDT 675
G LVSGSK E+ W+ E +GHK IT +S+ C VTSSKD
Sbjct: 162 DGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDG 221
Query: 676 FVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWK 819
+ WDI K L GH + V V + + TGS D +++W+
Sbjct: 222 DARIWDITLKKSIICLSGHTLAV-TCVKWGGDGIIYTGSQDCTIKMWE 268
Score = 71.3 bits (167), Expect = 8e-13
Identities = 37/115 (32%), Positives = 59/115 (51%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCI 654
GH+ + + F G + S S D V LW+ I+ F GH G + VS+ +
Sbjct: 358 GHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLL 417
Query: 655 VTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWK 819
++ SKD+ +K W+I TK + L GH EV+A + +V+G D+ L++WK
Sbjct: 418 LSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLWK 472
Score = 66.1 bits (154), Expect = 3e-11
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 7/193 (3%)
Frame = +1
Query: 268 GRYIAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFEL 444
G+ +A G+ + + +WD+ G V +A SP G H+ G G I +
Sbjct: 121 GKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNP 180
Query: 445 TNNEVV-CVFAGHKSAITCLQFD-----DQGHRLVSGSKDTEVILWDVISETGKVRFSGH 606
E+ GHK IT + ++ R V+ SKD + +WD+ + + SGH
Sbjct: 181 KKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGH 240
Query: 607 KGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVT 786
+T V + G I T S+D +K W+ + L GH + ++ L E L T
Sbjct: 241 TLAVTCVKW-GGDGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWI-NSLALSTEYVLRT 298
Query: 787 GSMDQELRVWKLN 825
G+ D R + N
Sbjct: 299 GAFDHTGRQYPPN 311
Score = 65.3 bits (152), Expect = 5e-11
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 6/129 (4%)
Frame = +1
Query: 472 AGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNC 651
AGH A+ C+ F G +L SGS DT V LWD+ +ET GHK + +V++
Sbjct: 106 AGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKH 165
Query: 652 IVTSSKDTFVKFWDIETKHC-FKTLGGHQMEV----WAAVLLKEE-RYLVTGSMDQELRV 813
+V+ SK + W+ + L GH+ + W V L R VT S D + R+
Sbjct: 166 LVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARI 225
Query: 814 WKLNWTEDV 840
W + + +
Sbjct: 226 WDITLKKSI 234
Score = 63.3 bits (147), Expect = 2e-10
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 1/182 (0%)
Frame = +1
Query: 307 IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKS 486
+W+ G+ + L G + LA S T + G FD + + + +K+
Sbjct: 266 MWETTQGKLIRELKGHGHWINSLALS-TEYVLRTGAFDHTGRQYPPNEEKQKALERYNKT 324
Query: 487 AITCLQFDDQGHRLVSGSKDTEVILWDV-ISETGKVRFSGHKGVITSVSFINGKNCIVTS 663
D RLVSGS D + LW+ +S+ K R +GH+ ++ V F I ++
Sbjct: 325 K------GDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASA 378
Query: 664 SKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTEDVK 843
S D V+ W+ T GH V+ + R L++GS D L++W++ T+ +K
Sbjct: 379 SFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIR-TKKLK 437
Query: 844 DD 849
D
Sbjct: 438 QD 439
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Frame = +1
Query: 301 VIIWDMKLGEKAQV-LPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAG 477
+ +W+ + ++ + L G +V + SP G +A FD ++ ++ + V VF G
Sbjct: 341 MFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRG 400
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIV 657
H + + + L+SGSKD+ + +W++ ++ K GH + +V + +V
Sbjct: 401 HVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVV 460
Query: 658 TSSKDTFVKFW 690
+ KD +K W
Sbjct: 461 SGGKDRVLKLW 471
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 709 CFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTE 834
C +T+ GH V + + L +GS D +R+W L +TE
Sbjct: 101 CSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDL-YTE 141
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 72.9 bits (171), Expect = 3e-13
Identities = 48/161 (29%), Positives = 74/161 (45%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
VT L + G +A G DG ++ L N E++ + HK I L+++ +G L++GS
Sbjct: 327 VTTLDWNGEGTLLATGSCDGQARIWTL-NGELISTLSKHKGPIFSLKWNKKGDYLLTGSV 385
Query: 544 DTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTL 723
D ++WDV +E K +F H G V + N + TSS D+ + I KT
Sbjct: 386 DRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDSMIYLCKIGETRPAKTF 444
Query: 724 GGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTEDVKD 846
GHQ EV L + S D ++W + + V D
Sbjct: 445 TGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHD 485
Score = 63.3 bits (147), Expect = 2e-10
Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 10/202 (4%)
Frame = +1
Query: 268 GRYIAVGACEHV-IIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFEL 444
G Y+ G+ + ++WD+K E Q + + + A D I + ++
Sbjct: 377 GDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDSMIYLCKI 435
Query: 445 TNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITS 624
F GH+ + C+++D G L S S D+ +W++ T H I +
Sbjct: 436 GETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYT 495
Query: 625 VSF------INGKN---CIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERY 777
+ + N N + ++S D+ VK WD E + GH+ V++ Y
Sbjct: 496 IRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEY 555
Query: 778 LVTGSMDQELRVWKLNWTEDVK 843
+ +GS+D+ + +W + + VK
Sbjct: 556 IASGSLDKSIHIWSIKEGKIVK 577
Score = 43.2 bits (97), Expect = 2e-04
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Frame = +1
Query: 304 IIWDMKLGEK--AQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAG 477
+I+ K+GE A+ G V + PTG+ +A D ++ + + V
Sbjct: 429 MIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLRE 488
Query: 478 HKSAITCLQFDDQGH---------RLVSGSKDTEVILWDVISETGKV--RFSGHKGVITS 624
H I +++ G L S S D+ V LWD +E GK+ F+GH+ + S
Sbjct: 489 HTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWD--AELGKMLCSFNGHREPVYS 546
Query: 625 VSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGH 732
++F I + S D + W I+ KT G+
Sbjct: 547 LAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGN 582
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 400 MAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISE 579
+A FD + +++ +++C F GH+ + L F G + SGS D + +W + +
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSI--K 571
Query: 580 TGKV--RFSGHKGV 615
GK+ ++G+ G+
Sbjct: 572 EGKIVKTYTGNGGI 585
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/89 (25%), Positives = 46/89 (51%)
Frame = +1
Query: 301 VIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGH 480
V +WD +LG+ G V LA SP G ++A G D +I+++ + ++V + G+
Sbjct: 523 VKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGN 582
Query: 481 KSAITCLQFDDQGHRLVSGSKDTEVILWD 567
I + ++ +G+++ + D V + D
Sbjct: 583 -GGIFEVCWNKEGNKIAACFADNSVCVLD 610
Score = 36.7 bits (81), Expect = 0.021
Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 17/145 (11%)
Frame = +1
Query: 451 NEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGH-------- 606
N V + GH S + + L SGS D +W + + K +G
Sbjct: 255 NSDVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILK 314
Query: 607 --KGV-------ITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVL 759
KG +T++ + + T S D + W + + TL H+ +++
Sbjct: 315 HAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNGE-LISTLSKHKGPIFSLKW 373
Query: 760 LKEERYLVTGSMDQELRVWKLNWTE 834
K+ YL+TGS+D+ VW + E
Sbjct: 374 NKKGDYLLTGSVDRTAVVWDVKAEE 398
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 72.5 bits (170), Expect = 3e-13
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHR-LVSGS 540
V +A SP G +A G DG I VF++ ++++ GH + L F R L SGS
Sbjct: 161 VLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGS 220
Query: 541 KDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKT 720
D V + D +T SGH + SV I T S D V+ WD++ + +T
Sbjct: 221 DDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQT 280
Query: 721 LGGHQMEVWA 750
+ H +VW+
Sbjct: 281 MSNHNDQVWS 290
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Frame = +1
Query: 265 SGRYIAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAV-GLFDGNINVF 438
+G+ +A G+ + I ++D+ + L G N+ V L SP + G DG++N+
Sbjct: 169 NGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMH 228
Query: 439 ELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVI 618
+ ++ +GH S + + G + +GS D V LWD+ S H +
Sbjct: 229 DAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQV 288
Query: 619 TSVSF 633
SV+F
Sbjct: 289 WSVAF 293
Score = 48.8 bits (111), Expect = 5e-06
Identities = 49/184 (26%), Positives = 76/184 (41%), Gaps = 16/184 (8%)
Frame = +1
Query: 295 EHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFA 474
E V +W + + G ++ V LAA P+G A D + VF++ N + V
Sbjct: 40 ETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLE 99
Query: 475 GHKSAITCLQFDDQGHRL-VSGSKDTEVILWDVIS----ETGKV----------RFSGHK 609
S + +QF+ +G L V+G V LWD S T + + S K
Sbjct: 100 APPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKK 159
Query: 610 GVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLK-EERYLVT 786
V++ NGK + S D + +D++ L GH M V + V + R L +
Sbjct: 160 FVLSVAWSPNGKR-LACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFS 218
Query: 787 GSMD 798
GS D
Sbjct: 219 GSDD 222
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Frame = +1
Query: 481 KSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFIN-GKNCIV 657
K + + + G RL GS D + ++DV + GH + S+ F +
Sbjct: 158 KKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLF 217
Query: 658 TSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
+ S D V D E K ++ GH V + + + TGS D+ +R+W L
Sbjct: 218 SGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDL 272
Score = 36.3 bits (80), Expect = 0.027
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Frame = +1
Query: 508 DDQGHRLVSGSKDTEVILWDVISETGKVRFS-GHKGVITSVSFINGKNCIVTSSKDTFVK 684
+D+ L++GS D V LW E VR + GH + +++ +SS D+FV+
Sbjct: 27 EDRPALLLTGSLDETVKLWRP-DELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVR 85
Query: 685 FWDIETKHCFKTLGGHQMEVWAAVLLKEERYL-VTGSMDQELRVW 816
+D++T L EVW + L V G +++W
Sbjct: 86 VFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLW 130
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 4/34 (11%)
Frame = +1
Query: 730 HQMEVWAA--VLLKEER--YLVTGSMDQELRVWK 819
H+ VWAA V E+R L+TGS+D+ +++W+
Sbjct: 13 HEDSVWAATWVPATEDRPALLLTGSLDETVKLWR 46
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 72.1 bits (169), Expect = 5e-13
Identities = 42/173 (24%), Positives = 78/173 (45%)
Frame = +1
Query: 301 VIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGH 480
VI+WD + + + L G + V+ + +G + DG + ++++ + V
Sbjct: 921 VIVWDKQTTQLLEELKGHDSQVSCVKML-SGERVLTAAHDGTVKMWDVRTDMCVATVGRC 979
Query: 481 KSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVT 660
SAI L++DD L + +DT +WD+ S + GH I S+ + ++ ++T
Sbjct: 980 SSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMV--EDTLIT 1037
Query: 661 SSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWK 819
S D + W + C L H V + ++ ++TGS D LR W+
Sbjct: 1038 GSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLLRFWE 1090
Score = 61.7 bits (143), Expect = 6e-10
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 2/177 (1%)
Frame = +1
Query: 301 VIIWDMKL--GEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFA 474
V IWD L E L G V A S + G D ++ V++ +++
Sbjct: 879 VKIWDPSLRGSELRATLKGHTGTVR--AISSDRGKIVSGSDDLSVIVWDKQTTQLLEELK 936
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCI 654
GH S ++C++ G R+++ + D V +WDV ++ I S+ + + +
Sbjct: 937 GHDSQVSCVKMLS-GERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGIL 995
Query: 655 VTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
+ +DT WDI + L GH W + E L+TGS D RVW ++
Sbjct: 996 AAAGRDTVANIWDIRSGKQMHKLKGHTK--WIRSIRMVEDTLITGSDDWTARVWSVS 1050
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 71.7 bits (168), Expect = 6e-13
Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 2/197 (1%)
Frame = +1
Query: 265 SGRYIAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFE 441
SG+Y+ + + +WD+ G + + G + V +A G A D V++
Sbjct: 350 SGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWD 409
Query: 442 LTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT 621
L + VF GH + + F G+ L SG +D + +WD+ H +++
Sbjct: 410 LRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVS 469
Query: 622 SVSFINGKN-CIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMD 798
V + + + T+S D V W K+L GH+ +V + + + + T S D
Sbjct: 470 QVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHD 529
Query: 799 QELRVWKLNWTEDVKDD 849
+ +++W + +D ++
Sbjct: 530 RTIKLWTSSGNDDEDEE 546
Score = 58.0 bits (134), Expect = 8e-09
Identities = 42/221 (19%), Positives = 85/221 (38%), Gaps = 1/221 (0%)
Frame = +1
Query: 157 SSMGLTKQYLRYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVIIWDMKLGEKA 336
S G+TK + T + ++ +T V + + A +W G
Sbjct: 274 SLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTD-GTLL 332
Query: 337 QVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQ 516
Q G + ++A P+G ++ +D ++++ + + GH ++ + F
Sbjct: 333 QTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQD 392
Query: 517 GHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDI 696
G S D+ +WD+ + + F GH + SV+F + + +D + WD+
Sbjct: 393 GALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDL 452
Query: 697 ETKHCFKTLGGHQMEVWAAVLLKEERY-LVTGSMDQELRVW 816
+ + H V +E Y L T S D ++ +W
Sbjct: 453 RMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIW 493
Score = 57.6 bits (133), Expect = 1e-08
Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 1/173 (0%)
Frame = +1
Query: 307 IWDM-KLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHK 483
+W+M ++ VL T + SP + +A D +++ T+ ++ F GH
Sbjct: 281 LWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWK-TDGTLLQTFEGHL 339
Query: 484 SAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTS 663
+ + F G L + S D LWD+ + + GH + ++F +
Sbjct: 340 DRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASC 399
Query: 664 SKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
D+ + WD+ T GH V++ +L +G D + R+W L
Sbjct: 400 GLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDL 452
Score = 45.2 bits (102), Expect = 6e-05
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 1/122 (0%)
Frame = +1
Query: 463 CVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVR-FSGHKGVITSVSFIN 639
C G +T F G L + S LW++ T + HK T V F
Sbjct: 249 CSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSP 308
Query: 640 GKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWK 819
+C+ T+S D K W + +T GH + +YL T S D+ R+W
Sbjct: 309 VDDCLATASADRTAKLWKTDGT-LLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWD 367
Query: 820 LN 825
+N
Sbjct: 368 IN 369
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 70.9 bits (166), Expect = 1e-12
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 5/187 (2%)
Frame = +1
Query: 271 RYIAVGACE-HVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELT 447
+++ GA + ++ +++ +K +V + + +A PT ++ D I +++
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 448 NNEVVC-VFAGHKSAITCLQFDDQG-HRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT 621
N +F GH + + F+ + + S S D + +W++ S H+ +
Sbjct: 130 NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
Query: 622 SVSFING--KNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSM 795
V + G K ++T S D K WD +TK C +TL GH V A E ++TGS
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSE 249
Query: 796 DQELRVW 816
D +R+W
Sbjct: 250 DGTVRIW 256
Score = 62.1 bits (144), Expect = 5e-10
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 4/165 (2%)
Frame = +1
Query: 307 IWDMKLGEKA-QVLPGENVVVTQLAASPTG-NHMAVGLFDGNINVFELTNNEVVCVFAGH 480
+WD + G Q+ G + V Q+ +P N A D I ++ L + + H
Sbjct: 125 LWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
Query: 481 KSAITCLQFDDQGHR--LVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCI 654
+ + C+ + G + L++GS D +WD +++ GH +++V F I
Sbjct: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPII 244
Query: 655 VTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTG 789
+T S+D V+ W T TL VWA +K R +V G
Sbjct: 245 ITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIG 289
Score = 56.0 bits (129), Expect = 3e-08
Identities = 50/198 (25%), Positives = 76/198 (38%), Gaps = 5/198 (2%)
Frame = +1
Query: 301 VIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGH 480
V IW+ + + + V P + G D I V+ + V VF H
Sbjct: 39 VCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAH 98
Query: 481 KSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVR-FSGHKGVITSVSFINGK--NC 651
I C+ ++S S D + LWD + + F GH + V F N K N
Sbjct: 99 SDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVF-NPKDTNT 157
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLK--EERYLVTGSMDQELRVWKLN 825
++S D +K W++ + TL HQ V ++ YL+TGS D +VW
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
Query: 826 WTEDVKDDDXLKHQLEIV 879
V+ D H + V
Sbjct: 218 TKSCVQTLDGHTHNVSAV 235
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 70.9 bits (166), Expect = 1e-12
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 5/187 (2%)
Frame = +1
Query: 271 RYIAVGACE-HVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELT 447
+++ GA + ++ +++ +K +V + + +A PT ++ D I +++
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 448 NNEVVC-VFAGHKSAITCLQFDDQG-HRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT 621
N +F GH + + F+ + + S S D + +W++ S H+ +
Sbjct: 130 NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
Query: 622 SVSFING--KNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSM 795
V + G K ++T S D K WD +TK C +TL GH V A E ++TGS
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSE 249
Query: 796 DQELRVW 816
D +R+W
Sbjct: 250 DGTVRIW 256
Score = 62.1 bits (144), Expect = 5e-10
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 4/165 (2%)
Frame = +1
Query: 307 IWDMKLGEKA-QVLPGENVVVTQLAASPTG-NHMAVGLFDGNINVFELTNNEVVCVFAGH 480
+WD + G Q+ G + V Q+ +P N A D I ++ L + + H
Sbjct: 125 LWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
Query: 481 KSAITCLQFDDQGHR--LVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCI 654
+ + C+ + G + L++GS D +WD +++ GH +++V F I
Sbjct: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPII 244
Query: 655 VTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTG 789
+T S+D V+ W T TL VWA +K R +V G
Sbjct: 245 ITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIG 289
Score = 56.0 bits (129), Expect = 3e-08
Identities = 50/198 (25%), Positives = 76/198 (38%), Gaps = 5/198 (2%)
Frame = +1
Query: 301 VIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGH 480
V IW+ + + + V P + G D I V+ + V VF H
Sbjct: 39 VCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAH 98
Query: 481 KSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVR-FSGHKGVITSVSFINGK--NC 651
I C+ ++S S D + LWD + + F GH + V F N K N
Sbjct: 99 SDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVF-NPKDTNT 157
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLK--EERYLVTGSMDQELRVWKLN 825
++S D +K W++ + TL HQ V ++ YL+TGS D +VW
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
Query: 826 WTEDVKDDDXLKHQLEIV 879
V+ D H + V
Sbjct: 218 TKSCVQTLDGHTHNVSAV 235
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 70.9 bits (166), Expect = 1e-12
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 5/187 (2%)
Frame = +1
Query: 271 RYIAVGACE-HVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELT 447
+++ GA + ++ +++ +K +V + + +A PT ++ D I +++
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 448 NNEVVC-VFAGHKSAITCLQFDDQG-HRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT 621
N +F GH + + F+ + + S S D + +W++ S H+ +
Sbjct: 130 NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
Query: 622 SVSFING--KNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSM 795
V + G K ++T S D K WD +TK C +TL GH V A E ++TGS
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSE 249
Query: 796 DQELRVW 816
D +R+W
Sbjct: 250 DGTVRIW 256
Score = 62.1 bits (144), Expect = 5e-10
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 4/165 (2%)
Frame = +1
Query: 307 IWDMKLGEKA-QVLPGENVVVTQLAASPTG-NHMAVGLFDGNINVFELTNNEVVCVFAGH 480
+WD + G Q+ G + V Q+ +P N A D I ++ L + + H
Sbjct: 125 LWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
Query: 481 KSAITCLQFDDQGHR--LVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCI 654
+ + C+ + G + L++GS D +WD +++ GH +++V F I
Sbjct: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPII 244
Query: 655 VTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTG 789
+T S+D V+ W T TL VWA +K R +V G
Sbjct: 245 ITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIG 289
Score = 56.0 bits (129), Expect = 3e-08
Identities = 50/198 (25%), Positives = 76/198 (38%), Gaps = 5/198 (2%)
Frame = +1
Query: 301 VIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGH 480
V IW+ + + + V P + G D I V+ + V VF H
Sbjct: 39 VCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAH 98
Query: 481 KSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVR-FSGHKGVITSVSFINGK--NC 651
I C+ ++S S D + LWD + + F GH + V F N K N
Sbjct: 99 SDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVF-NPKDTNT 157
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLK--EERYLVTGSMDQELRVWKLN 825
++S D +K W++ + TL HQ V ++ YL+TGS D +VW
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
Query: 826 WTEDVKDDDXLKHQLEIV 879
V+ D H + V
Sbjct: 218 TKSCVQTLDGHTHNVSAV 235
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 70.5 bits (165), Expect = 1e-12
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 3/189 (1%)
Frame = +1
Query: 265 SGRYIAVGACEH-VIIWDMKLGEKA-QVLPGENVVVTQLAASPTGNHMAVGLFDGNINVF 438
+G IA G+ + + +W + K VL G + L + G+ + D + +
Sbjct: 64 AGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAW 123
Query: 439 ELTNNEVVCVFAGHKSAI-TCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGV 615
++ + + A H S + +C ++SGS D LWD+ + G ++ K
Sbjct: 124 DVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDM-RQRGAIQTFPDKYQ 182
Query: 616 ITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSM 795
IT+VSF + + I T D VK WD+ TL GHQ + L + YL+T M
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 796 DQELRVWKL 822
D +L VW +
Sbjct: 243 DNKLCVWDM 251
Score = 62.9 bits (146), Expect = 3e-10
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Frame = +1
Query: 460 VCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGK-VRFSGHKGVITSVSFI 636
+ + +GH SA+ ++F+ G + SGS D E+ LW V + + GHK I + +
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWT 105
Query: 637 NGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKE-ERYLVTGSMDQELRV 813
+ + IV++S D V+ WD+ET K + H V + + +++GS D ++
Sbjct: 106 SDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKL 165
Query: 814 WKL 822
W +
Sbjct: 166 WDM 168
Score = 61.7 bits (143), Expect = 6e-10
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Frame = +1
Query: 241 THVTLNGISGRYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFD 420
T V+ + + + G V +WD++ GE L G +T ++ SP G+++ D
Sbjct: 184 TAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMD 243
Query: 421 GNINVFEL----TNNEVVCVFAGH-----KSAITCLQFDDQGHRLVSGSKDTEVILWDVI 573
+ V+++ N V +F GH K+ + C + G ++ +GS D V +WD
Sbjct: 244 NKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKC-SWSPDGTKVTAGSSDRMVHIWDTT 302
Query: 574 SETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDI 696
S + GH G + F + I + S D + +I
Sbjct: 303 SRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343
Score = 56.0 bits (129), Expect = 3e-08
Identities = 39/175 (22%), Positives = 70/175 (40%), Gaps = 8/175 (4%)
Frame = +1
Query: 307 IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKS 486
+WDM+ Q P + +T ++ S + + G D ++ V++L E GH+
Sbjct: 165 LWDMRQRGAIQTFP-DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQD 223
Query: 487 AITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVR----FSGHKGV----ITSVSFING 642
IT + G L++ D ++ +WD+ + R F GH+ + S+
Sbjct: 224 TITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPD 283
Query: 643 KNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQEL 807
+ S D V WD ++ L GH V V E + + S D+ +
Sbjct: 284 GTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNI 338
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +1
Query: 598 SGHKGVITSVSFINGKNCIVTSSKDTFVKFWDI--ETKHCFKTLGGHQMEVWAAVLLKEE 771
SGH + ++ F I + S D + W + + K+ F L GH+ + +
Sbjct: 50 SGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKN-FMVLKGHKNAILDLHWTSDG 108
Query: 772 RYLVTGSMDQELRVWKLNWTEDVK 843
+V+ S D+ +R W + + +K
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQIK 132
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 70.1 bits (164), Expect = 2e-12
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Frame = +1
Query: 277 IAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASP-TGNHMAVGLFDGNINVFELTNN 453
IA + ++ +WD+ G L G V + S + H+ +D I +++L
Sbjct: 289 IAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKG 348
Query: 454 EVV--CVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKV--RFSGHKGVIT 621
+F + +AI CL D G + SG D + LWD+ +TGK+ +GH +T
Sbjct: 349 YCTNTVLFTSNCNAI-CLSID--GLTVFSGHMDGNLRLWDI--QTGKLLSEVAGHSSAVT 403
Query: 622 SVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTL---GGHQMEVWA-AVLLKEERYLVTG 789
SVS N I+TS +D +D T TL G W+ + + ++ Y+ G
Sbjct: 404 SVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAG 463
Query: 790 SMDQELRVWKLN 825
S D + VW L+
Sbjct: 464 SADGSVHVWSLS 475
Score = 49.2 bits (112), Expect = 4e-06
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Frame = +1
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIV 657
H+ + F+ L +G +D V +WD S T G G I ++ + ++
Sbjct: 230 HEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVI 289
Query: 658 --TSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLK-EERYLVTGSMDQELRVWKLN 825
TSS + FV WD+ + TL GH +V A + K R++V+ + D+ +++W L+
Sbjct: 290 AATSSNNLFV--WDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLH 346
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 382 SPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVIL 561
SP +++A G DG+++V+ L+ +V + S I C + G L S K+ V
Sbjct: 454 SPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLASADKNGYVCT 513
Query: 562 W 564
W
Sbjct: 514 W 514
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/136 (18%), Positives = 56/136 (41%), Gaps = 1/136 (0%)
Frame = +1
Query: 418 DGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRF 597
D + +++ + ++ G I + +++ + + +WDV S +
Sbjct: 252 DRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTL 311
Query: 598 SGHKGVITSVSFIN-GKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEER 774
+GH + +V +V+++ D +K WD+ +C T+ A L +
Sbjct: 312 TGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTV-LFTSNCNAICLSIDGL 370
Query: 775 YLVTGSMDQELRVWKL 822
+ +G MD LR+W +
Sbjct: 371 TVFSGHMDGNLRLWDI 386
Score = 35.9 bits (79), Expect = 0.036
Identities = 20/93 (21%), Positives = 37/93 (39%)
Frame = +1
Query: 547 TEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLG 726
T+ + I T R H+G S+ F + T +D VK WD + K+L
Sbjct: 211 TDHFVESTIPSTCANRIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLY 270
Query: 727 GHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
G + + + + ++ + L VW ++
Sbjct: 271 GSLGNILDMAVTHDNKSVIAATSSNNLFVWDVS 303
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 68.5 bits (160), Expect = 6e-12
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 5/187 (2%)
Frame = +1
Query: 271 RYIAVGACE-HVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELT 447
+++ GA + ++ +++ +K +V + + +A PT ++ D I +++
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 448 NNEVVC-VFAGHKSAITCLQFDDQG-HRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT 621
+F GH + + F+ + + S S D + +W++ S H+ +
Sbjct: 130 KGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
Query: 622 SVSFING--KNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSM 795
V + G K ++T S D K WD +TK C +TL GH V A E ++TGS
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSE 249
Query: 796 DQELRVW 816
D +R+W
Sbjct: 250 DGTVRIW 256
Score = 62.5 bits (145), Expect = 4e-10
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 4/165 (2%)
Frame = +1
Query: 307 IWDMKLGEKA-QVLPGENVVVTQLAASPTG-NHMAVGLFDGNINVFELTNNEVVCVFAGH 480
+WD + G Q+ G + V Q+ +P N A D I ++ L + + H
Sbjct: 125 LWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
Query: 481 KSAITCLQFDDQGHR--LVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCI 654
+ + C+ + G + L++GS D +WD +++ GH +++V F I
Sbjct: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPII 244
Query: 655 VTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTG 789
+T S+D V+ W T TL VWA +K R +V G
Sbjct: 245 ITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIG 289
Score = 53.6 bits (123), Expect = 2e-07
Identities = 44/165 (26%), Positives = 67/165 (40%), Gaps = 5/165 (3%)
Frame = +1
Query: 400 MAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISE 579
+ G D I V+ + V VF H I C+ ++S S D + LWD
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
Query: 580 TGKVR-FSGHKGVITSVSFINGK--NCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWA 750
+ F GH + V+F N K N ++S D +K W++ + TL HQ V
Sbjct: 132 WACTQIFEGHSHYVMQVTF-NPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
Query: 751 AVLLK--EERYLVTGSMDQELRVWKLNWTEDVKDDDXLKHQLEIV 879
++ YL+TGS D +VW V+ + H + V
Sbjct: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAV 235
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 67.3 bits (157), Expect = 1e-11
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 1/179 (0%)
Frame = +1
Query: 265 SGRYIAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFE 441
S + G+ + I IWD+ G L G V LA S +M D + ++
Sbjct: 181 SNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWD 240
Query: 442 LTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT 621
L N+V+ + GH + CL +++G +D+ +WD+ ++ ++ H +
Sbjct: 241 LEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKM-QIFVLPHDSDVF 299
Query: 622 SVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMD 798
SV ++T S D+ +KFWD+ T+ H+ V A L +E V+ S D
Sbjct: 300 SVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASAD 358
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/119 (26%), Positives = 53/119 (44%)
Frame = +1
Query: 466 VFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGK 645
V GH + + FD +GS D + +WDV + K+ +GH G + ++ N
Sbjct: 165 VLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRH 224
Query: 646 NCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
+ ++ D VK WD+E ++ GH V+ L ++TG D RVW +
Sbjct: 225 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDI 283
Score = 58.8 bits (136), Expect = 4e-09
Identities = 35/164 (21%), Positives = 69/164 (42%)
Frame = +1
Query: 337 QVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQ 516
+VL G V +A P+ G D I ++++ + GH + L ++
Sbjct: 164 RVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNR 223
Query: 517 GHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDI 696
+ S D +V WD+ + GH + ++ + ++T +D+ + WDI
Sbjct: 224 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDI 283
Query: 697 ETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNW 828
TK L H +V++ + + ++TGS D ++ W L +
Sbjct: 284 RTKMQIFVL-PHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRY 326
Score = 48.0 bits (109), Expect = 8e-06
Identities = 40/179 (22%), Positives = 76/179 (42%)
Frame = +1
Query: 280 AVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEV 459
+ G + V WD++ + + G V LA PT + + G D V+++
Sbjct: 229 SAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQ 288
Query: 460 VCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFIN 639
+ V H S + + ++++GS D+ + WD+ + HK + +++
Sbjct: 289 IFVLP-HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHP 347
Query: 640 GKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
+N V++S D KF + + C L Q ++ AV + E+ +VTG L W
Sbjct: 348 KENDFVSASADNIKKFSLPKGEFCHNML-SLQRDIINAVAVNEDGVMVTGGDKGGLWFW 405
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +1
Query: 601 GHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYL 780
GH G + SV+F T S D +K WD+ T TL GH +V + Y+
Sbjct: 168 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYM 227
Query: 781 VTGSMDQELRVWKLNWTEDVK 843
+ D++++ W L + ++
Sbjct: 228 FSAGDDKQVKCWDLEQNKVIR 248
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 66.9 bits (156), Expect = 2e-11
Identities = 38/153 (24%), Positives = 70/153 (45%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
V L+ P + L G I +++ ++ F H+ + + F + VSG
Sbjct: 12 VKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGD 71
Query: 544 DTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTL 723
D ++ +W+ + GH I +V F + IV++S D ++ W+ +++ C L
Sbjct: 72 DYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVL 131
Query: 724 GGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
GH V A +E +V+ S+DQ +RVW +
Sbjct: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 45.6 bits (103), Expect = 4e-05
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 2/151 (1%)
Frame = +1
Query: 376 AASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEV 555
+ASP + M N ++F + V V GH + F +VSG+ D +V
Sbjct: 171 SASPADDLMRFSQM--NSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQV 228
Query: 556 ILWDVI-SETGKV-RFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGG 729
LW + ++ +V GH ++SV F ++ IV++S+D ++ WD + +T
Sbjct: 229 KLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRR 288
Query: 730 HQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
W + E L G D + V+KL
Sbjct: 289 EHDRFWILAVHPEINLLAAGH-DNGMIVFKL 318
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 66.1 bits (154), Expect = 3e-11
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Frame = +1
Query: 472 AGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNC 651
AGH + + + LVSG KD V LWD S GHK ++ SV + N
Sbjct: 265 AGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNW 324
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLK-EERYLVTGSMDQELRVW 816
++T+SKD +K +DI T ++ GH +V + E Y V+GS D + W
Sbjct: 325 LLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHW 380
Score = 56.8 bits (131), Expect = 2e-08
Identities = 57/241 (23%), Positives = 101/241 (41%), Gaps = 25/241 (10%)
Frame = +1
Query: 196 PTGSFNI-IASADCNSTHVTLNGI----SGRYIAVGACE-HVIIWDMKLGEKAQVLPGEN 357
P+ SF A N ++N + SGR + G+ +W+ + +L +
Sbjct: 106 PSTSFAAKFVHASLNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHD 165
Query: 358 VVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSG 537
+ + S N+M G G + ++ N V HK +I L F + S
Sbjct: 166 QPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSC 225
Query: 538 SKDTEVILWDVI------SETG-------KVRF------SGHKGVITSVSFINGKNCIVT 660
S DT V +WD S TG ++RF +GH + SV + K+ +V+
Sbjct: 226 SDDTTVKVWDFTKCVDESSLTGYIGKGVIEIRFGVMPCNAGHGWDVKSVDWHPTKSLLVS 285
Query: 661 SSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTEDV 840
KD VK WD + +L GH+ V + + +L+T S DQ ++++ + +++
Sbjct: 286 GGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKEL 345
Query: 841 K 843
+
Sbjct: 346 Q 346
Score = 50.8 bits (116), Expect = 1e-06
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 2/163 (1%)
Frame = +1
Query: 385 PTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILW 564
PT + + G D + +++ + +C GHK+ + ++++ G+ L++ SKD + L+
Sbjct: 278 PTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLY 337
Query: 565 DVISETGKVRFSGHKGVITSVSFIN-GKNCIVTSSKDTFVKFWDIETKH-CFKTLGGHQM 738
D+ + F GH +TS+++ + V+ S D + W + ++ + H
Sbjct: 338 DIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPNAHDN 397
Query: 739 EVWAAVLLKEERYLVTGSMDQELRVWKLNWTEDVKDDDXLKHQ 867
VW L +GS D + W N D D +++Q
Sbjct: 398 SVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPADNPRDVLMQNQ 440
Score = 44.8 bits (101), Expect = 8e-05
Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 2/140 (1%)
Frame = +1
Query: 277 IAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNE 456
++ G + V +WD + G + L G +V + + GN + D I ++++ +
Sbjct: 284 VSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMK 343
Query: 457 VVCVFAGHKSAITCLQFDD-QGHRLVSGSKDTEVILWDVISETGKVRF-SGHKGVITSVS 630
+ F GH +T L + VSGS D + W V E ++ + H + ++
Sbjct: 344 ELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLA 403
Query: 631 FINGKNCIVTSSKDTFVKFW 690
+ + + S D KFW
Sbjct: 404 WHPIGYLLCSGSNDHTTKFW 423
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 66.1 bits (154), Expect = 3e-11
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 9/183 (4%)
Frame = +1
Query: 301 VIIW-----DMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVC 465
+I+W D G + + G + V + S G G +DG + +++L E
Sbjct: 40 IILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTR 99
Query: 466 VFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKV--RFSGHKGVITSVSFIN 639
F GH + + F ++VS S+D + LW+ + E GHK ++ V F
Sbjct: 100 RFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSP 159
Query: 640 GK--NCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRV 813
IV++S D VK W+++ TL GH + + + +G D + +
Sbjct: 160 NTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILL 219
Query: 814 WKL 822
W L
Sbjct: 220 WDL 222
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Frame = +1
Query: 478 HKSAITCLQFD-DQGHRLVSGSKDTEVILWDVISE-----TGKVRFSGHKGVITSVSFIN 639
H +T + D +V+ S+D +ILW + E + R +GH + V +
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS 73
Query: 640 GKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
++ S D ++ WD+ T + GH +V + + R +V+ S D+ +++W
Sbjct: 74 DGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +1
Query: 604 HKGVITSVSF-INGKNCIVTSSKDTFVKFWDI--ETKH---CFKTLGGHQMEVWAAVLLK 765
H ++T+++ ++ + IVTSS+D + W + E K + + GH V VL
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS 73
Query: 766 EERYLVTGSMDQELRVWKLNWTEDVK 843
+ ++ ++GS D ELR+W L E +
Sbjct: 74 DGQFALSGSWDGELRLWDLATGESTR 99
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +1
Query: 301 VIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELT-NNEVVCVFAG 477
V +W+++ + L G + + +A SP G+ A G DG I +++L ++ + AG
Sbjct: 175 VKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG 234
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISET 582
S I L F + L + ++++ + +WD+ S++
Sbjct: 235 --SIIHSLCFSPNRYWLCAATENS-IRIWDLESKS 266
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 65.7 bits (153), Expect = 4e-11
Identities = 38/153 (24%), Positives = 70/153 (45%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
V L+ P + L G I +++ ++ F H+ + + F + VSG
Sbjct: 12 VKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGD 71
Query: 544 DTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTL 723
D ++ +W+ + GH I +V F + IV++S D ++ W+ +++ C L
Sbjct: 72 DYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVL 131
Query: 724 GGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
GH V A +E +V+ S+DQ +RVW +
Sbjct: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 45.2 bits (102), Expect = 6e-05
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 2/135 (1%)
Frame = +1
Query: 424 NINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVI-SETGKV-RF 597
N ++F + V V GH + F +VSG+ D +V LW + ++ +V
Sbjct: 185 NSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTL 244
Query: 598 SGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERY 777
GH ++SV F ++ IV++S+D ++ WD + +T W + E
Sbjct: 245 RGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMNL 304
Query: 778 LVTGSMDQELRVWKL 822
L G D + V+KL
Sbjct: 305 LAAGH-DSGMIVFKL 318
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 65.3 bits (152), Expect = 5e-11
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Frame = +1
Query: 310 WDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGH--K 483
+DM++G + G+ V ++ S GN + G D + + + T E++ V+ GH K
Sbjct: 171 FDMRIGREMSDNLGQPV--NCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISK 228
Query: 484 SAIT-CLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVT 660
S T C + H ++ GS+D V WD++ +F H V+TSVS+ ++C++T
Sbjct: 229 SFKTDCCLTNSDAH-VIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLT 287
Query: 661 SSKDTFVKFW 690
SS D ++ W
Sbjct: 288 SSVDGTIRVW 297
Score = 50.4 bits (115), Expect = 2e-06
Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Frame = +1
Query: 328 EKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQF 507
++A +L G V + GN+ D I ++ ++ + H + +
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHV 68
Query: 508 DDQGHRLVSGSKDTEVILWDVISETGKV--RFSGHKGVITSVSFINGKNCIVTSSKDTFV 681
+ S D +V WDV TG+V +F GH G + +V F + + +V++ D +
Sbjct: 69 TSDNAKFCSCGGDRQVYYWDV--STGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSL 126
Query: 682 KFWDIETKHC--FKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTEDVKDD 849
+ WD + + + V + VL K E ++ GS+D +R + + ++ D+
Sbjct: 127 RVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTE--IIGGSVDGTVRTFDMRIGREMSDN 182
Score = 39.9 bits (89), Expect = 0.002
Identities = 37/200 (18%), Positives = 78/200 (39%), Gaps = 2/200 (1%)
Frame = +1
Query: 229 DCNSTHVTLNGISGRYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAV 408
+ HVT + + ++ + G V WD+ G + G + V + + + + +
Sbjct: 62 EVRDVHVTSD--NAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVS 119
Query: 409 GLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGK 588
FD ++ V++ ++ V V T + ++ GS D V +D+ G+
Sbjct: 120 AGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDM--RIGR 177
Query: 589 VRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWA--AVLL 762
+ +S N NC++ D+ ++ D T + GH + + L
Sbjct: 178 EMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLT 237
Query: 763 KEERYLVTGSMDQELRVWKL 822
+ +++ GS D + W L
Sbjct: 238 NSDAHVIGGSEDGLVFFWDL 257
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 65.3 bits (152), Expect = 5e-11
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 5/187 (2%)
Frame = +1
Query: 271 RYIAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELT 447
+++ GA + I +++ +K +V + +A PT ++ D I +++
Sbjct: 70 QWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 448 NNEVVC-VFAGHKSAITCLQFDDQG-HRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT 621
+ +F GH + + F+ + + S S D + +W++ S H +
Sbjct: 130 KGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVN 189
Query: 622 SVSFING--KNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSM 795
V + G K ++T S D K WD +TK C +TL GH V A E ++TGS
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSE 249
Query: 796 DQELRVW 816
D +R+W
Sbjct: 250 DGTVRIW 256
Score = 61.3 bits (142), Expect = 8e-10
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 4/165 (2%)
Frame = +1
Query: 307 IWDMKLGEKA-QVLPGENVVVTQLAASPTG-NHMAVGLFDGNINVFELTNNEVVCVFAGH 480
+WD + G Q+ G + V Q+ +P N A D I ++ L + + H
Sbjct: 125 LWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
Query: 481 KSAITCLQFDDQGHR--LVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCI 654
+ C+ + G + L++GS D +WD +++ GH +++VSF I
Sbjct: 185 LKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPII 244
Query: 655 VTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTG 789
+T S+D V+ W T TL VWA +K R +V G
Sbjct: 245 ITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRVVIG 289
Score = 48.4 bits (110), Expect = 6e-06
Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 7/167 (4%)
Frame = +1
Query: 400 MAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISE 579
+ G D I V+ + + VF H I C+ ++S S D + LWD E
Sbjct: 72 VVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDW--E 129
Query: 580 TGKVR---FSGHKGVITSVSFINGK--NCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEV 744
G + F GH + V+F N K N ++S D +K W++ + TL H V
Sbjct: 130 KGWLCTQIFEGHSHYVMQVTF-NPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGV 188
Query: 745 WAAVLLK--EERYLVTGSMDQELRVWKLNWTEDVKDDDXLKHQLEIV 879
++ YL+TGS D +VW V+ + H + V
Sbjct: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAV 235
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 64.9 bits (151), Expect = 7e-11
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 10/184 (5%)
Frame = +1
Query: 301 VIIW-----DMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVC 465
+I+W D G + L G + V + S G G +DG + +++L E
Sbjct: 40 IILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTR 99
Query: 466 VFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFS---GHKGVITSVSFI 636
F GH + + F ++VS S+D + LW+ + E K S GHK ++ V F
Sbjct: 100 RFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGEC-KYTISEGDGHKEWVSCVRFS 158
Query: 637 NGK--NCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELR 810
IV++S D VK W+++ +L GH + + + +G D +
Sbjct: 159 PNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVIL 218
Query: 811 VWKL 822
+W L
Sbjct: 219 LWDL 222
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 6/123 (4%)
Frame = +1
Query: 466 VFAGHKSAITCLQFD-DQGHRLVSGSKDTEVILWDVISE-----TGKVRFSGHKGVITSV 627
+ H +T + D +V+ S+D +ILW + + + R +GH + V
Sbjct: 10 IMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDV 69
Query: 628 SFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQEL 807
+ ++ S D ++ WD+ T + GH +V + + R +V+ S D+ +
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTI 129
Query: 808 RVW 816
++W
Sbjct: 130 KLW 132
Score = 29.1 bits (62), Expect = 4.2
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +1
Query: 301 VIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELT-NNEVVCVFAG 477
V +W+++ + L G + + +A SP G+ A G DG I +++L ++ + AG
Sbjct: 175 VKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG 234
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISET 582
S I L F + L + ++++ + +WD+ S++
Sbjct: 235 --SIIHSLCFSPNRYWLCAATENS-IRIWDLESKS 266
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 62.9 bits (146), Expect = 3e-10
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 7/188 (3%)
Frame = +1
Query: 337 QVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFA-----GHKSAITCL 501
+V P ++ L+ SP + + +D + +E++ + A H + C
Sbjct: 19 EVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCS 78
Query: 502 QFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFV 681
+ D G + SG D + +W ++S V + H+G I ++++I G N + T S D +
Sbjct: 79 AWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTL 138
Query: 682 KFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN--WTEDVKDDDX 855
K+WD ++ T Q+ L + +V G+ D+ L V+ L TE +
Sbjct: 139 KYWDTRQQNPVHT---QQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQTEFKRIQSP 195
Query: 856 LKHQLEIV 879
LK+Q V
Sbjct: 196 LKYQTRCV 203
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 62.5 bits (145), Expect = 4e-10
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 10/184 (5%)
Frame = +1
Query: 301 VIIWDMKLGEKA-----QVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVC 465
+I+W + +KA + L G + V + S G G +DG + +++L
Sbjct: 40 IILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTR 99
Query: 466 VFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISE---TGKVRFSGHKGVITSVSFI 636
F GH + + F ++VS S+D + LW+ + E T GH+ ++ V F
Sbjct: 100 RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFS 159
Query: 637 NG--KNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELR 810
+ IV++S D VK W++ TL GH V + + +G D +
Sbjct: 160 PNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVL 219
Query: 811 VWKL 822
+W L
Sbjct: 220 LWDL 223
Score = 55.2 bits (127), Expect = 6e-08
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCI 654
GH + + G +SGS D E+ LWD+ + RF GH + SV+F I
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI 120
Query: 655 VTSSKDTFVKFWDI--ETKHCFKTLGGHQMEVWAAVLLKEERYL----VTGSMDQELRVW 816
V++S+D +K W+ E K+ GG W + + L V+ S D+ ++VW
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISE-GGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 179
Query: 817 KLN 825
L+
Sbjct: 180 NLS 182
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Frame = +1
Query: 478 HKSAITCLQFD-DQGHRLVSGSKDTEVILWDVISE-----TGKVRFSGHKGVITSVSFIN 639
H +T + D +VS S+D +ILW + + + R +GH + V +
Sbjct: 14 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS 73
Query: 640 GKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
++ S D ++ WD+ + GH +V + + R +V+ S D+ +++W
Sbjct: 74 DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLW 132
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 301 VIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGH 480
V +W++ + L G V+ +A SP G+ A G DG + +++L + + +
Sbjct: 176 VKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN 235
Query: 481 KSAITCLQFDDQGHRLVSGSKDTEVILWDVISET 582
S I L F + L + + + + +WD+ S++
Sbjct: 236 -SVIHALCFSPNRYWLCAAT-EHGIKIWDLESKS 267
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 61.7 bits (143), Expect = 6e-10
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 3/183 (1%)
Frame = +1
Query: 301 VIIWDMKLGEKAQVLPGE-NVVVTQLAAS-PTGNHMAVGLFDGNINVFELTNNEVVCVFA 474
V IWD++ P + N + A+ P + VG NI+V ++ A
Sbjct: 151 VFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGS-SNNISVQSSPSHGYTPTIA 209
Query: 475 -GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNC 651
GHK ++ L +D G LVSG + + +WD + + ++ GH + + +
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWT 831
++ S D+ ++ WD+ + C T H VWA ++ +G DQ L + L
Sbjct: 270 CLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLATR 329
Query: 832 EDV 840
E V
Sbjct: 330 ESV 332
Score = 29.5 bits (63), Expect = 3.1
Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVC--VFAGHKSAITCLQFDDQGHRLVSG 537
V + + S +++ G DG + + + C F H + + LVS
Sbjct: 43 VLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGES-TLVSC 101
Query: 538 SKDTEVILWDVISETGKVR-FSGHKGVITSVSFINGKNCIVTS-SKDTFVKFWDIE 699
S DT V WD +S+ R H +T ++ N +V S V WDIE
Sbjct: 102 SSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIE 157
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 61.7 bits (143), Expect = 6e-10
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 3/183 (1%)
Frame = +1
Query: 301 VIIWDMKLGEKAQVLPGE-NVVVTQLAAS-PTGNHMAVGLFDGNINVFELTNNEVVCVFA 474
V IWD++ P + N + A+ P + VG NI+V ++ A
Sbjct: 151 VFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGS-SNNISVQSSPSHGYTPTIA 209
Query: 475 -GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNC 651
GHK ++ L +D G LVSG + + +WD + + ++ GH + + +
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWT 831
++ S D+ ++ WD+ + C T H VWA ++ +G DQ L + L
Sbjct: 270 CLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLATR 329
Query: 832 EDV 840
E V
Sbjct: 330 ESV 332
Score = 29.5 bits (63), Expect = 3.1
Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVC--VFAGHKSAITCLQFDDQGHRLVSG 537
V + + S +++ G DG + + + C F H + + LVS
Sbjct: 43 VLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGES-TLVSC 101
Query: 538 SKDTEVILWDVISETGKVR-FSGHKGVITSVSFINGKNCIVTS-SKDTFVKFWDIE 699
S DT V WD +S+ R H +T ++ N +V S V WDIE
Sbjct: 102 SSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIE 157
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 61.3 bits (142), Expect = 8e-10
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 6/178 (3%)
Frame = +1
Query: 301 VIIWDMKLGEKAQVLPGENVV-VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAG 477
+++WD G + + G + V LA +P G M D I + L +V V +
Sbjct: 339 IVMWDTD-GNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNL-ETKVERVIS- 395
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGK-VRFSGH---KGVITSVSFINGK 645
+ IT L G + E+ LWD+ E + ++FSGH K VI S
Sbjct: 396 EEQPITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDS 455
Query: 646 NCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEV-WAAVLLKEERYLVTGSMDQELRVW 816
+ I + S+D+ V W+++ + L GH M V + K R L + S DQ +R+W
Sbjct: 456 SFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 51.2 bits (117), Expect = 9e-07
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 5/139 (3%)
Frame = +1
Query: 403 AVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISET 582
AV L+ + + +E V + HK+ + +QF + G L + S D I+W V+ +
Sbjct: 198 AVSLYKDHCCGRDQIPSETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDN 257
Query: 583 G---KVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQ--MEVW 747
K H+ ++ VS+ ++T +K WD++T T G + V
Sbjct: 258 KVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVS 317
Query: 748 AAVLLKEERYLVTGSMDQE 804
+ + LV GS D E
Sbjct: 318 SCAWFPDSTRLVCGSSDPE 336
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/114 (21%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Frame = +1
Query: 241 THVTLNGISGRYIAVGACEHVIIWDMKLGEKAQVLP-----GENVVVTQLAASPTGNHMA 405
T ++++G +I +C+ + +WD+ GE Q L V+ + +A
Sbjct: 401 TSLSISGDGKFFIVNLSCQEIHLWDLA-GEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIA 459
Query: 406 VGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVI-LW 564
G D + ++ L N + + V +GH + C+ ++ + R+++ + D + I +W
Sbjct: 460 SGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +1
Query: 721 LGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTEDVKDDDXLKHQLE 873
L H+ EVW +YL T S D +WK+ +D K + LKH LE
Sbjct: 220 LVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKV--LDDNKVE--LKHTLE 266
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 61.3 bits (142), Expect = 8e-10
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 15/199 (7%)
Frame = +1
Query: 271 RYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTN 450
R ++ +I+W+ +K + V A SP G +A G D ++F L++
Sbjct: 79 RIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSS 138
Query: 451 N-------EVVCVFAGHKSAITCLQF-DDQGHRLVSGSKDTEVILWDV-----ISETGKV 591
V + GH+ ++C Q+ ++ L++ S D ILWDV S G
Sbjct: 139 TADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGE 198
Query: 592 RFSGHKGVITSVSFI-NGKNCIVTSSKDTFVKFWDIE-TKHCFKTLGGHQMEVWAAVLLK 765
SGH + SVS + N ++ S D+ + WD +T GH+ +V
Sbjct: 199 FQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFP 258
Query: 766 EERYLVTGSMDQELRVWKL 822
+ TGS D R++ +
Sbjct: 259 DGYRFGTGSDDGTCRLYDI 277
Score = 40.7 bits (91), Expect = 0.001
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 12/142 (8%)
Frame = +1
Query: 304 IIWDMKLGEKAQVLPGE---NVVVTQLAASPTG---NHMAVGLFDGNINVFEL-TNNEVV 462
I+WD+ G K V GE L+ S +G N G D +++ + V
Sbjct: 182 ILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAV 241
Query: 463 CVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVIS----ETGKVRFSGHKGVITSVS 630
F GH+ + ++F G+R +GS D L+D+ + + + G G +TS++
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 301
Query: 631 F-INGKNCIVTSSKDTFVKFWD 693
F ++G+ + + WD
Sbjct: 302 FSVSGRLLFAGYASNNTCYVWD 323
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +1
Query: 472 AGHKSAITCLQFDDQGHR-LVSGSKDTEVILWDVISETGKVR-FSGHKGVITSVSFINGK 645
+GH + + + +SGS D+ LWD + + VR F GH+G + +V F
Sbjct: 201 SGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG 260
Query: 646 NCIVTSSKDTFVKFWDIETKHCFKTLGGH 732
T S D + +DI T H + H
Sbjct: 261 YRFGTGSDDGTCRLYDIRTGHQLQVYQPH 289
Score = 31.5 bits (68), Expect = 0.78
Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 10/131 (7%)
Frame = +1
Query: 454 EVVC--VFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSV 627
++VC GH + L + + +R+VS S+D +I+W+ ++ + +
Sbjct: 54 DLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTC 113
Query: 628 SFINGKNCIVTSSKDTFVKFWDIE-------TKHCFKTLGGHQMEVWAAVLL-KEERYLV 783
+F + D+ + + T + L GH+ V + E+ +L+
Sbjct: 114 AFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLI 173
Query: 784 TGSMDQELRVW 816
T S DQ +W
Sbjct: 174 TSSGDQTCILW 184
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 61.3 bits (142), Expect = 8e-10
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 15/199 (7%)
Frame = +1
Query: 271 RYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTN 450
R ++ +I+W+ +K + V A SP G +A G D ++F L++
Sbjct: 17 RIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSS 76
Query: 451 N-------EVVCVFAGHKSAITCLQF-DDQGHRLVSGSKDTEVILWDV-----ISETGKV 591
V + GH+ ++C Q+ ++ L++ S D ILWDV S G
Sbjct: 77 TADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGE 136
Query: 592 RFSGHKGVITSVSFI-NGKNCIVTSSKDTFVKFWDIE-TKHCFKTLGGHQMEVWAAVLLK 765
SGH + SVS + N ++ S D+ + WD +T GH+ +V
Sbjct: 137 FQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFP 196
Query: 766 EERYLVTGSMDQELRVWKL 822
+ TGS D R++ +
Sbjct: 197 DGYRFGTGSDDGTCRLYDI 215
Score = 50.8 bits (116), Expect = 1e-06
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 16/187 (8%)
Frame = +1
Query: 304 IIWDMKLGEKAQVLPGE---NVVVTQLAASPTG---NHMAVGLFDGNINVFEL-TNNEVV 462
I+WD+ G K V GE L+ S +G N G D +++ + V
Sbjct: 120 ILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAV 179
Query: 463 CVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVIS----ETGKVRFSGHKGVITSVS 630
F GH+ + ++F G+R +GS D L+D+ + + + G G +TS++
Sbjct: 180 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 239
Query: 631 F-INGKNCIVTSSKDTFVKFWDIETKHCFKTLG----GHQMEVWAAVLLKEERYLVTGSM 795
F ++G+ + + WD LG H+ + L + L TGS
Sbjct: 240 FSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSW 299
Query: 796 DQELRVW 816
D L++W
Sbjct: 300 DSNLKIW 306
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 61.3 bits (142), Expect = 8e-10
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 15/199 (7%)
Frame = +1
Query: 271 RYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTN 450
R ++ +I+W+ +K + V A SP G +A G D ++F L++
Sbjct: 79 RIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSS 138
Query: 451 N-------EVVCVFAGHKSAITCLQF-DDQGHRLVSGSKDTEVILWDV-----ISETGKV 591
V + GH+ ++C Q+ ++ L++ S D ILWDV S G
Sbjct: 139 TADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGE 198
Query: 592 RFSGHKGVITSVSFI-NGKNCIVTSSKDTFVKFWDIE-TKHCFKTLGGHQMEVWAAVLLK 765
SGH + SVS + N ++ S D+ + WD +T GH+ +V
Sbjct: 199 FQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFP 258
Query: 766 EERYLVTGSMDQELRVWKL 822
+ TGS D R++ +
Sbjct: 259 DGYRFGTGSDDGTCRLYDI 277
Score = 50.8 bits (116), Expect = 1e-06
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 16/187 (8%)
Frame = +1
Query: 304 IIWDMKLGEKAQVLPGE---NVVVTQLAASPTG---NHMAVGLFDGNINVFEL-TNNEVV 462
I+WD+ G K V GE L+ S +G N G D +++ + V
Sbjct: 182 ILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAV 241
Query: 463 CVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVIS----ETGKVRFSGHKGVITSVS 630
F GH+ + ++F G+R +GS D L+D+ + + + G G +TS++
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 301
Query: 631 F-INGKNCIVTSSKDTFVKFWDIETKHCFKTLG----GHQMEVWAAVLLKEERYLVTGSM 795
F ++G+ + + WD LG H+ + L + L TGS
Sbjct: 302 FSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSW 361
Query: 796 DQELRVW 816
D L++W
Sbjct: 362 DSNLKIW 368
Score = 31.5 bits (68), Expect = 0.78
Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 10/131 (7%)
Frame = +1
Query: 454 EVVC--VFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSV 627
++VC GH + L + + +R+VS S+D +I+W+ ++ + +
Sbjct: 54 DLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTC 113
Query: 628 SFINGKNCIVTSSKDTFVKFWDIE-------TKHCFKTLGGHQMEVWAAVLL-KEERYLV 783
+F + D+ + + T + L GH+ V + E+ +L+
Sbjct: 114 AFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLI 173
Query: 784 TGSMDQELRVW 816
T S DQ +W
Sbjct: 174 TSSGDQTCILW 184
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 60.5 bits (140), Expect = 1e-09
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Frame = +1
Query: 382 SPTGNHMAVGLFDGNINVFELTNNEVVC--------VFAGHKSAITCLQFDDQGHRLVSG 537
SP G +A DG I V++ + ++ F H + C+ F L SG
Sbjct: 222 SPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASG 281
Query: 538 SKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFK 717
S+D ++ +W + + RF H +TS+SF + ++++S D + +++ K
Sbjct: 282 SQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLK 341
Query: 718 TLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTE 834
GH V A+ + ++T S D ++VW T+
Sbjct: 342 EFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTD 380
Score = 57.2 bits (132), Expect = 1e-08
Identities = 31/107 (28%), Positives = 48/107 (44%)
Frame = +1
Query: 400 MAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISE 579
+A G DG I ++ + + F H +T L F G +L+S S D + + S
Sbjct: 278 LASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSG 337
Query: 580 TGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKT 720
F GH + F + + I+T+S D VK WD +T C +T
Sbjct: 338 KLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQT 384
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/87 (26%), Positives = 40/87 (45%)
Frame = +1
Query: 307 IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKS 486
IW ++ G + + VT L+ S G+ + FD + L + +++ F GH S
Sbjct: 289 IWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTS 348
Query: 487 AITCLQFDDQGHRLVSGSKDTEVILWD 567
+ F G R+++ S D V +WD
Sbjct: 349 YVNHAIFTSDGSRIITASSDCTVKVWD 375
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 60.1 bits (139), Expect = 2e-09
Identities = 39/178 (21%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
Frame = +1
Query: 301 VIIWDM-KLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAG 477
V IWD+ G+ + G V + S G+ +D NI ++ +V+ F+
Sbjct: 307 VKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFST 366
Query: 478 HKS--AITCLQFDDQGHRLVSGSKDTEVILWDVISETGKV--RFSGHKGVITSVSFINGK 645
K + DD+ + L++G D +++ WD+ TG+V + H G + +++F++
Sbjct: 367 GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDI--NTGEVTQEYDQHLGAVNTITFVDNN 424
Query: 646 NCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEE-RYLVTGSMDQELRVW 816
VTSS D ++ W+ K + M ++ + +L S+D ++ ++
Sbjct: 425 RRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIY 482
Score = 54.4 bits (125), Expect = 1e-07
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 6/163 (3%)
Frame = +1
Query: 349 GENVVVTQLAASPTGNHMAVGL-FDGNINVFELTNN-EVVCVFAGHKSAITCLQFDDQGH 522
G V+ + P H+ + D + ++++ N+ + + + GH A+ + F + G
Sbjct: 280 GHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGS 339
Query: 523 RLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFING----KNCIVTSSKDTFVKFW 690
+ ++ D + WD +ETG+V + G I V +N +N ++ D + W
Sbjct: 340 KFLTAGYDKNIKYWD--TETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 397
Query: 691 DIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWK 819
DI T + H V + R VT S D+ LRVW+
Sbjct: 398 DINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 440
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 59.7 bits (138), Expect = 3e-09
Identities = 46/189 (24%), Positives = 74/189 (39%), Gaps = 8/189 (4%)
Frame = +1
Query: 301 VIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGH 480
V IWD++ Q V + P + G +GNI V++L N C
Sbjct: 102 VKIWDLR-APGCQKEYESVAAVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPE 160
Query: 481 -KSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKV-------RFSGHKGVITSVSFI 636
+A+ L G +V+ + +W ++ + + H G I
Sbjct: 161 VDTAVRSLTVMWDGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLS 220
Query: 637 NGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
+ T+S D VK W+++ K L GHQ VW V + +LVT S D R+W
Sbjct: 221 PANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLW 280
Query: 817 KLNWTEDVK 843
+ ++VK
Sbjct: 281 SMPAGKEVK 289
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/148 (19%), Positives = 69/148 (46%), Gaps = 3/148 (2%)
Frame = +1
Query: 277 IAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNN 453
+A + +H I W+ + G + + + V +L +P +++A + +I +F++ +N
Sbjct: 8 LATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLAAAC-NPHIRLFDVNSN 66
Query: 454 --EVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSV 627
+ V + H + + + F + SGS+D V +WD+ + + + V T V
Sbjct: 67 SPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVAAVNTVV 126
Query: 628 SFINGKNCIVTSSKDTFVKFWDIETKHC 711
N + +++ ++ ++ WD+ C
Sbjct: 127 LHPN-QTELISGDQNGNIRVWDLRANSC 153
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/93 (21%), Positives = 36/93 (38%)
Frame = +1
Query: 328 EKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQF 507
E L N + + SP ++A D + ++ + ++ V GH+ + F
Sbjct: 202 EPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVF 261
Query: 508 DDQGHRLVSGSKDTEVILWDVISETGKVRFSGH 606
G LV+ S D LW + + + GH
Sbjct: 262 SVDGEFLVTASSDMTARLWSMPAGKEVKVYQGH 294
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = +1
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
+ T+S D ++FW+ ET C++T+ V + ++ YL + + +R++ +N
Sbjct: 8 LATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYL-AAACNPHIRLFDVN 64
Score = 31.5 bits (68), Expect = 0.78
Identities = 30/153 (19%), Positives = 53/153 (34%), Gaps = 8/153 (5%)
Frame = +1
Query: 298 HVIIWDMKLGE-KAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFEL-------TNN 453
++ +WD++ +++P + V L G + G V+ L T
Sbjct: 142 NIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVWRLLRGKQTMTEF 201
Query: 454 EVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSF 633
E + H I L + S D V +W+V + +GH+ + F
Sbjct: 202 EPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVF 261
Query: 634 INGKNCIVTSSKDTFVKFWDIETKHCFKTLGGH 732
+VT+S D + W + K GH
Sbjct: 262 SVDGEFLVTASSDMTARLWSMPAGKEVKVYQGH 294
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/104 (30%), Positives = 47/104 (45%)
Frame = +1
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIV 657
H L G L +G D V +WDV + F GH+ ++ + F G + +
Sbjct: 221 HSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELY 280
Query: 658 TSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTG 789
+ S D VK W++E K GHQ E+ A L++ER L G
Sbjct: 281 SGSFDRTVKVWNVEDKAFITENHGHQGEILAIDALRKERALTVG 324
Score = 56.0 bits (129), Expect = 3e-08
Identities = 35/148 (23%), Positives = 67/148 (45%)
Frame = +1
Query: 373 LAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTE 552
LA S G ++A G D +++++++ E V F GH++ ++CL F L SGS D
Sbjct: 228 LAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRT 287
Query: 553 VILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGH 732
V +W+V + GH+G I ++ + + + T + E+
Sbjct: 288 VKVWNVEDKAFITENHGHQGEILAIDALRKERALTVGRDRTMLYHKVPESTRMIYRAPAS 347
Query: 733 QMEVWAAVLLKEERYLVTGSMDQELRVW 816
+E + + + YL +GS + + +W
Sbjct: 348 SLE--SCCFISDNEYL-SGSDNGTVALW 372
Score = 52.0 bits (119), Expect = 5e-07
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 1/157 (0%)
Frame = +1
Query: 268 GRYIAVGACE-HVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFEL 444
GRY+A G + HV IWD++ E Q PG V+ L + + G FD + V+ +
Sbjct: 234 GRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNV 293
Query: 445 TNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITS 624
+ + GH+ I + + L G T +L+ + E+ ++ + + S
Sbjct: 294 EDKAFITENHGHQGEILAIDALRKERALTVGRDRT--MLYHKVPESTRMIYRAPASSLES 351
Query: 625 VSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQ 735
FI+ + S T + ++ K F HQ
Sbjct: 352 CCFISDNEYLSGSDNGTVALWGMLKKKPVFVFKNAHQ 388
Score = 39.1 bits (87), Expect = 0.004
Identities = 35/160 (21%), Positives = 62/160 (38%), Gaps = 19/160 (11%)
Frame = +1
Query: 466 VFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVIS-ETGKV----------------- 591
V H+ ++ + D R S SKD ++ WDV S +T K
Sbjct: 156 VIVKHRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLRE 215
Query: 592 -RFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKE 768
R H +++ + + T D V WD+ T+ + GH+ V
Sbjct: 216 PRNKNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYG 275
Query: 769 ERYLVTGSMDQELRVWKLNWTEDVKDDDXLKHQLEIVKLE 888
L +GS D+ ++VW + + ++ HQ EI+ ++
Sbjct: 276 TSELYSGSFDRTVKVWNVEDKAFITENHG--HQGEILAID 313
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 59.3 bits (137), Expect = 3e-09
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 13/164 (7%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCV--FAGHKSAITCLQFDDQGHRLVSG 537
V A SP+G +A FDG +++ +E C+ GH++ + + ++ G L +
Sbjct: 77 VRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATC 136
Query: 538 SKDTEVILWDVISETG---KVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFW----DI 696
S+D V +W+V+ +GH + V + + + + S D +K W D
Sbjct: 137 SRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDD 196
Query: 697 ETKHCFKTLG----GHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
C +TLG GH VW+ +VT S D L++W
Sbjct: 197 GEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIW 240
Score = 41.9 bits (94), Expect = 6e-04
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 5/125 (4%)
Frame = +1
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILW-DVISETGKVR-FSGHKGVITSVSFINGKNC 651
H + + G L + S D +W + SE + GH+ + SVS+ +C
Sbjct: 73 HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSC 132
Query: 652 IVTSSKDTFVKFWDI---ETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
+ T S+D V W++ C L GH +V L + S D ++VW
Sbjct: 133 LATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVW-- 190
Query: 823 NWTED 837
W+ED
Sbjct: 191 -WSED 194
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 59.3 bits (137), Expect = 3e-09
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNE----VVCVFAGHKSAITCLQFDDQGHRLV 531
V +A S G + G D I V+ E +V HKSA+ L +D G L
Sbjct: 238 VNAIAVSTNGT-VYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLF 296
Query: 532 SGSKDTEVILW--DVISETGKVR--FSGHKGVITSVSFINGKNCIVTSSKDTFVKFW--- 690
SGS D +++W + S VR GH I +S N + +++ S D V+ W
Sbjct: 297 SGSCDRSILVWEREDTSNYMAVRGALRGHDKAI--LSLFNVSDLLLSGSADRTVRIWRRG 354
Query: 691 DIETKHCFKTLGGHQMEVWAAVLLKEERY-----LVTGSMDQELRVWKLNWTE 834
+ C + L GH V + ++E+ +++GS+D E++ WK++ T+
Sbjct: 355 PDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIISGSLDGEVKCWKVSVTK 407
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 58.0 bits (134), Expect = 8e-09
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 16/229 (6%)
Frame = +1
Query: 181 YLRYAPTGSFNIIASADCNSTHVT-LNGI-SGRYIAVGACE-HVIIWDMKLGEKAQVLPG 351
YL A TGS + + + D VT +N GR++AVG V +WD + + L G
Sbjct: 163 YLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKG 222
Query: 352 ENVVVTQLAASPTGNH-MAVGLFDGNI-NVFELTNNEVVCVFAGHKSAITCLQFDDQGHR 525
+ +++ + NH + G DG I N + +V + GH + L++ G +
Sbjct: 223 GHQ--SRVGSLAWNNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQ 280
Query: 526 LVSGSKDTEVILWD--VISETGKV----RFSGHKGVITSVSFINGK-NCIVT--SSKDTF 678
L SG D V +WD V S R H + ++++ + N + T D
Sbjct: 281 LASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRT 340
Query: 679 VKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVT--GSMDQELRVWK 819
+KFW+ T C ++ +V + + K ER L++ G +L +WK
Sbjct: 341 IKFWNTHTGACLNSVDTGS-QVCSLLWSKNERELLSSHGFTQNQLTLWK 388
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 58.0 bits (134), Expect = 8e-09
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 16/229 (6%)
Frame = +1
Query: 181 YLRYAPTGSFNIIASADCNSTHVT-LNGI-SGRYIAVGACE-HVIIWDMKLGEKAQVLPG 351
YL A TGS + + + D VT +N GR++AVG V +WD + + L G
Sbjct: 153 YLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKG 212
Query: 352 ENVVVTQLAASPTGNH-MAVGLFDGNI-NVFELTNNEVVCVFAGHKSAITCLQFDDQGHR 525
+ +++ + NH + G DG I N + +V + GH + L++ G +
Sbjct: 213 GHQ--SRVGSLAWNNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQ 270
Query: 526 LVSGSKDTEVILWD--VISETGKV----RFSGHKGVITSVSFINGK-NCIVT--SSKDTF 678
L SG D V +WD V S R H + ++++ + N + T D
Sbjct: 271 LASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRT 330
Query: 679 VKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVT--GSMDQELRVWK 819
+KFW+ T C ++ +V + + K ER L++ G +L +WK
Sbjct: 331 IKFWNTHTGACLNSVDTGS-QVCSLLWSKNERELLSSHGFTQNQLTLWK 378
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = +1
Query: 490 ITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSK 669
+TC F G L S D + +LW + K H +IT + F + + TSS
Sbjct: 654 VTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSF 713
Query: 670 DTFVKFWDIETK-HCFKTLGGHQMEVWAAVL--LKEERYLVTGSMDQELRVWKLN 825
D V+ WD + K + +T GH V + +K++ + + D E+R W +N
Sbjct: 714 DKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDD-LICSCDNDNEIRYWSIN 767
Score = 52.4 bits (120), Expect = 4e-07
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 5/211 (2%)
Frame = +1
Query: 205 SFNIIASADCNSTHVTLNGIS--GRYIA-VGACEHVIIWDMKLGEKAQVLPGENVVVTQL 375
+F + S ++T VT S G+ +A G + ++W + L ++T +
Sbjct: 640 TFTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDI 699
Query: 376 AASPTGNHMAVGLFDGNINVFELTNNEV-VCVFAGHKSAITCLQFDDQGHRLV-SGSKDT 549
SP+ +A FD + V++ N + F GH S +T L F L+ S D
Sbjct: 700 RFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDN 759
Query: 550 EVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGG 729
E+ W I+ R +KG T + F + +S V D+ET+ +L G
Sbjct: 760 EIRYWS-INNGSCTRV--YKGGSTQIRFQPRVGKYLAASSANLVNVLDVETQAIRHSLQG 816
Query: 730 HQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
H + + +L + S D ++VW L
Sbjct: 817 HANPINSVCWDPSGDFLASVSEDM-VKVWTL 846
Score = 42.7 bits (96), Expect = 3e-04
Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 5/156 (3%)
Frame = +1
Query: 238 STHVTLNGISGRYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLF 417
ST + G+Y+A + V + D++ L G + + P+G+ +A +
Sbjct: 779 STQIRFQPRVGKYLAASSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLA-SVS 837
Query: 418 DGNINVFEL-TNNEVVCVFA----GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISET 582
+ + V+ L T +E CV G+K +C+ LV G + + LW++ SE
Sbjct: 838 EDMVKVWTLGTGSEGECVHELSCNGNKFQ-SCVFHPAYPSLLVIGCYQS-LELWNM-SEN 894
Query: 583 GKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFW 690
+ H+G+ITS++ + ++S D VK W
Sbjct: 895 KTMTLPAHEGLITSLAVSTATGLVASASHDKLVKLW 930
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 56.8 bits (131), Expect = 2e-08
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 3/164 (1%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFD-GNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGS 540
+T + GN + G G + V++ + GH + C+ + L +G+
Sbjct: 309 LTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGA 368
Query: 541 KDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKT 720
D +V +W+V+S T + F+ H +T++ F+ + ++++S D V+ WD + +KT
Sbjct: 369 DDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKT 428
Query: 721 LGGHQMEVWAAVLLKEERYLV-TGSMDQ-ELRVWKLNWTEDVKD 846
+ ++ +V G++D E+ VW T +KD
Sbjct: 429 YTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKK-TGQIKD 471
Score = 56.8 bits (131), Expect = 2e-08
Identities = 42/187 (22%), Positives = 73/187 (39%), Gaps = 4/187 (2%)
Frame = +1
Query: 268 GRYIAVGACE--HVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFE 441
G ++ G + +++WD + G V + SP +A G D + V+
Sbjct: 318 GNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWN 377
Query: 442 LTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVIS-ETGKVRFSGHKGVI 618
+ + F H +A+T L F H L+S S D V WD + K +
Sbjct: 378 VMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQF 437
Query: 619 TSVSFINGKNCIVTSSKDTFVKF-WDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSM 795
S++ + + + D+F F W +T L GH+ V + + L + S
Sbjct: 438 VSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSW 497
Query: 796 DQELRVW 816
D +R+W
Sbjct: 498 DYTVRLW 504
Score = 55.2 bits (127), Expect = 6e-08
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Frame = +1
Query: 310 WDMKLGE--KAQVLPGENVVVTQLAASPTGNHMAVGLFDG-NINVFELTNNEVVCVFAGH 480
WD K + K P V+ L A P+G+ + G D I V+ ++ + +GH
Sbjct: 418 WDFKRYKNYKTYTTPTPRQFVS-LTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGH 476
Query: 481 KSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVT 660
++ + L F L S S D V LWDV + G V H + +V+F + +
Sbjct: 477 EAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLAS 536
Query: 661 SSKDTFVKFWD 693
S+ D + FWD
Sbjct: 537 STLDGQINFWD 547
Score = 41.9 bits (94), Expect = 6e-04
Identities = 36/186 (19%), Positives = 77/186 (41%), Gaps = 6/186 (3%)
Frame = +1
Query: 277 IAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNN 453
+A GA ++ + +W++ G VT L + + DG + ++
Sbjct: 364 LATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRY 423
Query: 454 EVVCVFAGHKSA-ITCLQFDDQGHRLVSGSKDT-EVILWDVISETGKVR--FSGHKGVIT 621
+ + L D G + +G+ D+ E+ +W +TG+++ SGH+ +
Sbjct: 424 KNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWS--KKTGQIKDILSGHEAPVH 481
Query: 622 SVSFINGKNCIVTSSKDTFVKFWDI-ETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMD 798
+ F + +SS D V+ WD+ +K +T H +V + + L + ++D
Sbjct: 482 GLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETF-RHNHDVLTVAFRPDGKQLASSTLD 540
Query: 799 QELRVW 816
++ W
Sbjct: 541 GQINFW 546
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 56.8 bits (131), Expect = 2e-08
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 3/164 (1%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFD-GNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGS 540
+T + GN + G G + V++ + GH + C+ + L +G+
Sbjct: 349 LTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGA 408
Query: 541 KDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKT 720
D +V +W+V+S T + F+ H +T++ F+ + ++++S D V+ WD + +KT
Sbjct: 409 DDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKT 468
Query: 721 LGGHQMEVWAAVLLKEERYLV-TGSMDQ-ELRVWKLNWTEDVKD 846
+ ++ +V G++D E+ VW T +KD
Sbjct: 469 YTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKK-TGQIKD 511
Score = 56.8 bits (131), Expect = 2e-08
Identities = 42/187 (22%), Positives = 73/187 (39%), Gaps = 4/187 (2%)
Frame = +1
Query: 268 GRYIAVGACE--HVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFE 441
G ++ G + +++WD + G V + SP +A G D + V+
Sbjct: 358 GNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWN 417
Query: 442 LTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVIS-ETGKVRFSGHKGVI 618
+ + F H +A+T L F H L+S S D V WD + K +
Sbjct: 418 VMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQF 477
Query: 619 TSVSFINGKNCIVTSSKDTFVKF-WDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSM 795
S++ + + + D+F F W +T L GH+ V + + L + S
Sbjct: 478 VSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSW 537
Query: 796 DQELRVW 816
D +R+W
Sbjct: 538 DYTVRLW 544
Score = 55.2 bits (127), Expect = 6e-08
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Frame = +1
Query: 310 WDMKLGE--KAQVLPGENVVVTQLAASPTGNHMAVGLFDG-NINVFELTNNEVVCVFAGH 480
WD K + K P V+ L A P+G+ + G D I V+ ++ + +GH
Sbjct: 458 WDFKRYKNYKTYTTPTPRQFVS-LTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGH 516
Query: 481 KSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVT 660
++ + L F L S S D V LWDV + G V H + +V+F + +
Sbjct: 517 EAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLAS 576
Query: 661 SSKDTFVKFWD 693
S+ D + FWD
Sbjct: 577 STLDGQINFWD 587
Score = 41.9 bits (94), Expect = 6e-04
Identities = 36/186 (19%), Positives = 77/186 (41%), Gaps = 6/186 (3%)
Frame = +1
Query: 277 IAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNN 453
+A GA ++ + +W++ G VT L + + DG + ++
Sbjct: 404 LATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRY 463
Query: 454 EVVCVFAGHKSA-ITCLQFDDQGHRLVSGSKDT-EVILWDVISETGKVR--FSGHKGVIT 621
+ + L D G + +G+ D+ E+ +W +TG+++ SGH+ +
Sbjct: 464 KNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWS--KKTGQIKDILSGHEAPVH 521
Query: 622 SVSFINGKNCIVTSSKDTFVKFWDI-ETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMD 798
+ F + +SS D V+ WD+ +K +T H +V + + L + ++D
Sbjct: 522 GLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETF-RHNHDVLTVAFRPDGKQLASSTLD 580
Query: 799 QELRVW 816
++ W
Sbjct: 581 GQINFW 586
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCI 654
GH++A+ C FD G +++GS D V +W + + GH+G IT ++ + +
Sbjct: 303 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALV 362
Query: 655 VTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEER---YLVTGSMDQELRVWKLN 825
++S D ++ W + L GH V A + L++ S D R+W
Sbjct: 363 ASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDAR 422
Query: 826 WTE 834
+++
Sbjct: 423 YSQ 425
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = +1
Query: 592 RFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEE 771
+ GH+ + F ++T S D VK W +ET C + GH+ ++ +
Sbjct: 300 KLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNN 359
Query: 772 RYLVTGSMDQELRVWKL 822
+ + S D +RVW+L
Sbjct: 360 ALVASASNDFVIRVWRL 376
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Frame = +1
Query: 235 NSTHVTLNGISGRYIAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVG 411
N+ + + SGRY+ G+ + ++ IW M+ G +T LA S +A
Sbjct: 306 NAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASA 365
Query: 412 LFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQG---HRLVSGSKDTEVILWD 567
D I V+ L + + V GH A+T + F + ++L+S S D +WD
Sbjct: 366 SNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWD 420
Score = 35.5 bits (78), Expect = 0.048
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 715 KTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
K L GH+ V+ A+ + RY++TGS D+ +++W +
Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSM 334
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 56.0 bits (129), Expect = 3e-08
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
Frame = +1
Query: 406 VGLFDGNINVFE--LTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISE 579
+G FDGN V+E T++E V V GH+S + + ++ G L + +D V +W++ E
Sbjct: 65 LGSFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPE 124
Query: 580 TGK-----VRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETK----HCFKTL--- 723
+GH + V + + + + S D +K W E + +C +TL
Sbjct: 125 EDDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSEL 184
Query: 724 -GGHQMEVWAAVLLKEERYLVTGSMDQELRVWK 819
GH VW+ +VT S D +++WK
Sbjct: 185 NNGHSSTVWSISFNAAGDKMVTCSDDLAVKIWK 217
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 56.0 bits (129), Expect = 3e-08
Identities = 41/190 (21%), Positives = 83/190 (43%), Gaps = 8/190 (4%)
Frame = +1
Query: 277 IAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNN 453
+ VG+ E + +W++ + G VT +SP + +A+G DG I+V + +
Sbjct: 154 VLVGSQEGPLQLWNINTKKMLYQFKGWGSSVTSCVSSPALDVVAIGCADGKIHVHNIKLD 213
Query: 454 EVVCVFA-GHKSAITCLQFDDQGHRLV-SGSKDTEVILWDVISE-TGKVRFSGHKGVITS 624
E + F + A+T L F G L+ SG + +W++ + V H I S
Sbjct: 214 EEIVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIIS 273
Query: 625 VSFINGKNCIVTSSKDTFVKFWDIETK----HCFKTLGGHQMEVWAAVLLKEERYLVTGS 792
++F+ + ++++S D +K W +T + GH R++++
Sbjct: 274 LNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNGRHILSAG 333
Query: 793 MDQELRVWKL 822
D+ R++ +
Sbjct: 334 QDRAFRLFSV 343
Score = 41.5 bits (93), Expect = 7e-04
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 2/164 (1%)
Frame = +1
Query: 187 RYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVIIWDMKLGE-KAQVLPGENVV 363
RYA G + C+ST+ + I+ G + +WD K E K+Q G ++V
Sbjct: 470 RYAHDGE---VIGVACDSTNTLM-------ISAGYHGDLKVWDFKKRELKSQWDVGCSLV 519
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
++ +A D I ++++ ++V F GH IT L F + G ++S S
Sbjct: 520 --KIVYHRVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSM 577
Query: 544 DTEVILWDVISETGKVRFSGHKGV-ITSVSFINGKNCIVTSSKD 672
D + +WDVI K H V IT++S + + T+ D
Sbjct: 578 DGSLRIWDVI--LAKQIDGVHVDVPITALSLSPNMDVLATAHSD 619
Score = 35.5 bits (78), Expect = 0.048
Identities = 21/114 (18%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = +1
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSF-INGKNCI 654
H + + D ++S ++ +WD K ++ ++ V +NG +
Sbjct: 473 HDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRELKSQWDVGCSLVKIVYHRVNG--LL 530
Query: 655 VTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
T + D ++ +D+ T + GH + ++ +++++ SMD LR+W
Sbjct: 531 ATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIW 584
Score = 35.5 bits (78), Expect = 0.048
Identities = 25/111 (22%), Positives = 48/111 (43%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
V +A T M + G++ V++ E+ + S + + G L + +
Sbjct: 477 VIGVACDSTNTLMISAGYHGDLKVWDFKKRELKSQWDVGCSLVKIVYHRVNG-LLATVAD 535
Query: 544 DTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDI 696
D + L+DV++ F GH IT + F +++SS D ++ WD+
Sbjct: 536 DFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDV 586
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 55.6 bits (128), Expect = 4e-08
Identities = 33/156 (21%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Frame = +1
Query: 361 VVTQLAASPTGNHMAVGLFDGNINVFELTNNEVV--CVFAGHKSAITCLQFDDQGHRLVS 534
+VT LA +P G +G DG ++++ + + + V H+ AI+ +++ S
Sbjct: 449 IVTALAVTPDGTEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYSPDLSMFAS 508
Query: 535 GSKDTEVILWDVISETGKVR-FSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHC 711
+ E ++WD +S K++ H I +++ + T S DT V ++++
Sbjct: 509 ADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVDKPAS 568
Query: 712 FK-TLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
+ T+ G + + ++ ++V+ D +RVW
Sbjct: 569 SRMTIKGAHLGGVYGLGFADDSHVVSSGEDACIRVW 604
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Frame = +1
Query: 391 GNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWD- 567
G V ++G F+L++ E H + + C++F G + ++ S D + I++D
Sbjct: 164 GEDFLVNFYEGPPFKFKLSSRE-------HSNFVNCVRFAPDGSKFITVSSDKKGIIYDG 216
Query: 568 -VISETGKVRFS-GHKGVITSVSFINGKNCIVTSSKDTFVKFWDI 696
G++ GHKG I +VS+ ++T S D K WDI
Sbjct: 217 KTCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVSADKSAKIWDI 261
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/137 (19%), Positives = 56/137 (40%), Gaps = 4/137 (2%)
Frame = +1
Query: 427 INVFELTNNEVVCVFAGH-KSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSG 603
+ F + V F GH + ++C + R+V+ +D V ++ K+
Sbjct: 126 VRAFMWDSGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEGPPFKFKLSSRE 185
Query: 604 HKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLG---GHQMEVWAAVLLKEER 774
H + V F + +T S D +D +T L GH+ ++A + +
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGK 245
Query: 775 YLVTGSMDQELRVWKLN 825
++T S D+ ++W ++
Sbjct: 246 QVLTVSADKSAKIWDIS 262
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 54.8 bits (126), Expect = 7e-08
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 5/165 (3%)
Frame = +1
Query: 241 THVTLNGISGRYIAVGACEHVIIW-DMKLGEKA--QVLPGENVVVTQLAASPTGNHMAVG 411
T V G S + A + V IW + G A L + V + PT +
Sbjct: 268 TSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSA 327
Query: 412 LFDGNINVFELTNNEVVCVFAGHKSAI--TCLQFDDQGHRLVSGSKDTEVILWDVISETG 585
DG ++L++ + + + T F G L +G+ + V +WDV S+
Sbjct: 328 SLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQAN 387
Query: 586 KVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKT 720
+F GH G +T++SF + T+++D V+ WD+ FK+
Sbjct: 388 VAKFDGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRKLRNFKS 431
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +1
Query: 526 LVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFW---DI 696
+ +G D +L+D S +GH +TSV F+ + ++T+S D V+ W
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGD 296
Query: 697 ETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMD 798
C TL H EV A + +Y V+ S+D
Sbjct: 297 GNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLD 330
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +1
Query: 604 HKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLV 783
+K I S+ ++ K+ I T D +D + TL GH +V + + + ++
Sbjct: 221 NKPGICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVL 280
Query: 784 TGSMDQELRVWK 819
T S D+ +R+W+
Sbjct: 281 TASADKTVRIWR 292
Score = 38.3 bits (85), Expect = 0.007
Identities = 39/195 (20%), Positives = 76/195 (38%), Gaps = 6/195 (3%)
Frame = +1
Query: 277 IAVGACEHV-IIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNN 453
IA G + +++D G+ L G + VT + + + D + ++ +
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGD 296
Query: 454 -EVVCVFA--GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGH-KGV-I 618
C + H + + + VS S D +D+ S + + S K V
Sbjct: 297 GNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDY 356
Query: 619 TSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMD 798
T+ +F + T + + VK WD++++ GH EV A+ E Y + + +
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEV-TAISFSENGYFLATAAE 415
Query: 799 QELRVWKLNWTEDVK 843
+R+W L + K
Sbjct: 416 DGVRLWDLRKLRNFK 430
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 54.8 bits (126), Expect = 7e-08
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 5/165 (3%)
Frame = +1
Query: 241 THVTLNGISGRYIAVGACEHVIIW-DMKLGEKA--QVLPGENVVVTQLAASPTGNHMAVG 411
T V G S + A + V IW + G A L + V + PT +
Sbjct: 268 TSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSA 327
Query: 412 LFDGNINVFELTNNEVVCVFAGHKSAI--TCLQFDDQGHRLVSGSKDTEVILWDVISETG 585
DG ++L++ + + + T F G L +G+ + V +WDV S+
Sbjct: 328 SLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQAN 387
Query: 586 KVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKT 720
+F GH G +T++SF + T+++D V+ WD+ FK+
Sbjct: 388 VAKFDGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRKLRNFKS 431
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +1
Query: 526 LVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFW---DI 696
+ +G D +L+D S +GH +TSV F+ + ++T+S D V+ W
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGD 296
Query: 697 ETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMD 798
C TL H EV A + +Y V+ S+D
Sbjct: 297 GNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLD 330
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +1
Query: 604 HKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLV 783
+K I S+ ++ K+ I T D +D + TL GH +V + + + ++
Sbjct: 221 NKPGICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVL 280
Query: 784 TGSMDQELRVWK 819
T S D+ +R+W+
Sbjct: 281 TASADKTVRIWR 292
Score = 38.3 bits (85), Expect = 0.007
Identities = 39/195 (20%), Positives = 76/195 (38%), Gaps = 6/195 (3%)
Frame = +1
Query: 277 IAVGACEHV-IIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNN 453
IA G + +++D G+ L G + VT + + + D + ++ +
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGD 296
Query: 454 -EVVCVFA--GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGH-KGV-I 618
C + H + + + VS S D +D+ S + + S K V
Sbjct: 297 GNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDY 356
Query: 619 TSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMD 798
T+ +F + T + + VK WD++++ GH EV A+ E Y + + +
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEV-TAISFSENGYFLATAAE 415
Query: 799 QELRVWKLNWTEDVK 843
+R+W L + K
Sbjct: 416 DGVRLWDLRKLRNFK 430
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 54.8 bits (126), Expect = 7e-08
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Frame = +1
Query: 451 NEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVS 630
NEV C+ S + C F G L S D +V +W++ + + H +IT V
Sbjct: 499 NEVSCIRKS-ASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR 557
Query: 631 FINGKNCIVTSSKDTFVKFWDIETKHCF-KTLGGHQMEVWAAVL-LKEERYLVTGSMDQE 804
F + TSS D +K WD F +T+ GH V + K+ L + + +
Sbjct: 558 FRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNND 617
Query: 805 LRVWKLN 825
+R W +N
Sbjct: 618 IRFWDIN 624
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 1/152 (0%)
Frame = +1
Query: 367 TQLAASPTGNHMAVGLFDGNINVFEL-TNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
TQ+ P + +++F++ NN+ V +F GH S + + + G + S S+
Sbjct: 636 TQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSE 695
Query: 544 DTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTL 723
D V LW + S S SV F ++ ++ W+ C T+
Sbjct: 696 DA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCM-TV 753
Query: 724 GGHQMEVWAAVLLKEERYLVTGSMDQELRVWK 819
GH+ + A + + S D+ +++WK
Sbjct: 754 AGHECVISALAQSPSTGVVASASHDKSVKIWK 785
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 54.8 bits (126), Expect = 7e-08
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Frame = +1
Query: 451 NEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVS 630
NEV C+ S + C F G L S D +V +W++ + + H +IT V
Sbjct: 501 NEVSCIRKS-ASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR 559
Query: 631 FINGKNCIVTSSKDTFVKFWDIETKHCF-KTLGGHQMEVWAAVL-LKEERYLVTGSMDQE 804
F + TSS D +K WD F +T+ GH V + K+ L + + +
Sbjct: 560 FRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNND 619
Query: 805 LRVWKLN 825
+R W +N
Sbjct: 620 IRFWDIN 626
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 1/152 (0%)
Frame = +1
Query: 367 TQLAASPTGNHMAVGLFDGNINVFEL-TNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
TQ+ P + +++F++ NN+ V +F GH S + + + G + S S+
Sbjct: 638 TQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSE 697
Query: 544 DTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTL 723
D V LW + S S SV F ++ ++ W+ C T+
Sbjct: 698 DA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCM-TV 755
Query: 724 GGHQMEVWAAVLLKEERYLVTGSMDQELRVWK 819
GH+ + A + + S D+ +++WK
Sbjct: 756 AGHECVISALAQSPSTGVVASASHDKSVKIWK 787
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 54.8 bits (126), Expect = 7e-08
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Frame = +1
Query: 451 NEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVS 630
NEV C+ S + C F G L S D +V +W++ + + H +IT V
Sbjct: 501 NEVSCIRKS-ASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR 559
Query: 631 FINGKNCIVTSSKDTFVKFWDIETKHCF-KTLGGHQMEVWAAVL-LKEERYLVTGSMDQE 804
F + TSS D +K WD F +T+ GH V + K+ L + + +
Sbjct: 560 FRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNND 619
Query: 805 LRVWKLN 825
+R W +N
Sbjct: 620 IRFWDIN 626
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 1/152 (0%)
Frame = +1
Query: 367 TQLAASPTGNHMAVGLFDGNINVFEL-TNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
TQ+ P + +++F++ NN+ V +F GH S + + + G + S S+
Sbjct: 638 TQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSE 697
Query: 544 DTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTL 723
D V LW + S S SV F ++ ++ W+ C T+
Sbjct: 698 DA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCM-TV 755
Query: 724 GGHQMEVWAAVLLKEERYLVTGSMDQELRVWK 819
GH+ + A + + S D+ +++WK
Sbjct: 756 AGHECVISALAQSPSTGVVASASHDKSVKIWK 787
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 54.8 bits (126), Expect = 7e-08
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Frame = +1
Query: 451 NEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVS 630
NEV C+ S + C F G L S D +V +W++ + + H +IT V
Sbjct: 501 NEVSCIRKS-ASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR 559
Query: 631 FINGKNCIVTSSKDTFVKFWDIETKHCF-KTLGGHQMEVWAAVL-LKEERYLVTGSMDQE 804
F + TSS D +K WD F +T+ GH V + K+ L + + +
Sbjct: 560 FRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNND 619
Query: 805 LRVWKLN 825
+R W +N
Sbjct: 620 IRFWDIN 626
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 1/152 (0%)
Frame = +1
Query: 367 TQLAASPTGNHMAVGLFDGNINVFEL-TNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
TQ+ P + +++F++ NN+ V +F GH S + + + G + S S+
Sbjct: 638 TQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSE 697
Query: 544 DTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTL 723
D V LW + S S SV F ++ ++ W+ C T+
Sbjct: 698 DA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCM-TV 755
Query: 724 GGHQMEVWAAVLLKEERYLVTGSMDQELRVWK 819
GH+ + A + + S D+ +++WK
Sbjct: 756 AGHECVISALAQSPSTGVVASASHDKSVKIWK 787
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 54.8 bits (126), Expect = 7e-08
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Frame = +1
Query: 451 NEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVS 630
NEV C+ S + C F G L S D +V +W++ + + H +IT V
Sbjct: 501 NEVSCIRKS-ASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR 559
Query: 631 FINGKNCIVTSSKDTFVKFWDIETKHCF-KTLGGHQMEVWAAVL-LKEERYLVTGSMDQE 804
F + TSS D +K WD F +T+ GH V + K+ L + + +
Sbjct: 560 FRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNND 619
Query: 805 LRVWKLN 825
+R W +N
Sbjct: 620 IRFWDIN 626
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 1/152 (0%)
Frame = +1
Query: 367 TQLAASPTGNHMAVGLFDGNINVFEL-TNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
TQ+ P + +++F++ NN+ V +F GH S + + + G + S S+
Sbjct: 638 TQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSE 697
Query: 544 DTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTL 723
D V LW + S S SV F ++ ++ W+ C T+
Sbjct: 698 DA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCM-TV 755
Query: 724 GGHQMEVWAAVLLKEERYLVTGSMDQELRVWK 819
GH+ + A + + S D+ +++WK
Sbjct: 756 AGHECVISALAQSPSTGVVASASHDKSVKIWK 787
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 54.0 bits (124), Expect = 1e-07
Identities = 44/182 (24%), Positives = 71/182 (39%), Gaps = 8/182 (4%)
Frame = +1
Query: 301 VIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGH 480
V IWD+++ E + + V T + P + G +GNI V++L + C
Sbjct: 108 VKIWDLRVRECQREFRSVSPVNT-VVLHPNQTELISGDQNGNIRVWDLRADLCSCELVPE 166
Query: 481 KSA-ITCLQFDDQGHRLVSGSKDTEVILWDVISETGKV-------RFSGHKGVITSVSFI 636
I L G +V+ + +W + E + + H I
Sbjct: 167 VGTPIRSLTVMWDGTMVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLS 226
Query: 637 NGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
G + T+S D VK W+++ K L GH+ VW + YLVT S D R+W
Sbjct: 227 PGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLW 286
Query: 817 KL 822
+
Sbjct: 287 SM 288
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 4/150 (2%)
Frame = +1
Query: 274 YIAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTN 450
Y+A + + I +W + G ++ V +L +P + V + +I +F+L +
Sbjct: 12 YLATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKL-VAACNPHIRLFDLRS 70
Query: 451 -NEVVCV--FAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT 621
N + V F H + + F GH + SGS+D V +WD+ + F V T
Sbjct: 71 YNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSPVNT 130
Query: 622 SVSFINGKNCIVTSSKDTFVKFWDIETKHC 711
V N + +++ ++ ++ WD+ C
Sbjct: 131 VVLHPN-QTELISGDQNGNIRVWDLRADLC 159
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/94 (22%), Positives = 39/94 (41%)
Frame = +1
Query: 328 EKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQF 507
E L N + + SP ++A D + ++ L ++ V GH+ + F
Sbjct: 208 EPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDF 267
Query: 508 DDQGHRLVSGSKDTEVILWDVISETGKVRFSGHK 609
G LV+ S DT LW + + ++ + H+
Sbjct: 268 SMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHR 301
Score = 37.9 bits (84), Expect = 0.009
Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 8/154 (5%)
Frame = +1
Query: 388 TGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWD 567
TG+ M G DG++ +++L E F T + +Q L+SG ++ + +WD
Sbjct: 95 TGHMMYSGSEDGSVKIWDLRVRECQREFRSVSPVNTVVLHPNQTE-LISGDQNGNIRVWD 153
Query: 568 VISETGKVRFSGHKGV-ITSVSFINGKNCIVTSSKDTFVKFW----DIETKHCFKTLG-- 726
+ ++ G I S++ + +V ++ W + +T F+ L
Sbjct: 154 LRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDRGTCYVWRSLCERQTMTEFEPLHKL 213
Query: 727 -GHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
H + +L +YL T S D+ +++W L+
Sbjct: 214 QAHNSHILKCLLSPGNKYLATASSDKTVKIWNLD 247
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/109 (20%), Positives = 39/109 (35%)
Frame = +1
Query: 442 LTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT 621
+T E + H S I L + S D V +W++ + +GH+ +
Sbjct: 204 MTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVW 263
Query: 622 SVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKE 768
F +VT+S DT + W + H+ LL++
Sbjct: 264 DCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVCCTLLRD 312
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 53.6 bits (123), Expect = 2e-07
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 4/184 (2%)
Frame = +1
Query: 301 VIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAV-GLFDGNINVFELTNNEVVCVFAG 477
V +WD+ + + S T M V G D + V+ T E +
Sbjct: 445 VTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVW-CTRQEASVINID 503
Query: 478 HKSAITCLQFDDQGHRLVS-GSKDTEVILWDV--ISETGKVRFSGHKGVITSVSFINGKN 648
K+ I C++++ ++ GS D + +D+ IS+ V FSGHK ++ V F++ N
Sbjct: 504 MKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHV-FSGHKKAVSYVKFLSN-N 561
Query: 649 CIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNW 828
+ ++S D+ ++ WD++ +T GH E L YL GS E+ V+
Sbjct: 562 ELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVYHKEI 621
Query: 829 TEDV 840
T V
Sbjct: 622 TRPV 625
Score = 37.1 bits (82), Expect = 0.016
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 643 KNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLK-EERYLVTGSMDQELRVW 816
KN I +S + V WD+ T+ H+ W+ + E LV+GS D +++VW
Sbjct: 433 KNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVW 491
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 52.8 bits (121), Expect = 3e-07
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Frame = +1
Query: 490 ITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSK 669
I + D Q + + + D+ WDV S K+ F GH + +V + + I+T S+
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 670 DTFVKFWDIETKHCFKTLGGH----QMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTED 837
D + WD +T C K +G ++ V + L E +LV G + L +W L +E
Sbjct: 222 DGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGSESWLVCG-QGKNLALWNLPASEC 280
Query: 838 VK 843
V+
Sbjct: 281 VQ 282
Score = 31.5 bits (68), Expect = 0.78
Identities = 26/159 (16%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
+ ++ P + D +++ + ++ F GH + + ++++GS+
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 544 DTEVILWDVISETGK-VRFSGHKG----VITSVSFINGKNCIVTSSKDTFVKFWDIETKH 708
D +WD +TGK V+ G + + S ++G + + + W++
Sbjct: 222 DGTARIWD--CKTGKCVKVIGSQDKKSRLRVSSMALDGSESWLVCGQGKNLALWNLPASE 279
Query: 709 CFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
C +T+ + ++ +E+ ++T + LR + LN
Sbjct: 280 CVQTI---PIPAHVQDVMFDEKQILTVGAEPLLRRFDLN 315
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 52.4 bits (120), Expect = 4e-07
Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 8/194 (4%)
Frame = +1
Query: 262 ISGRYIAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVF 438
+ G ++A+G + IWD+ + + + G + V LA S + ++ G D +I
Sbjct: 219 LRGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDKSILQR 276
Query: 439 EL-TNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGV 615
++ T + V GHKS I L++ L SG D ++ +W+ S +RF H
Sbjct: 277 DIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAA 336
Query: 616 ITSVSFINGKNCIVTS---SKDTFVKFWDIETK---HCFKTLGGHQMEVWAAVLLKEERY 777
+ ++++ ++ S + D ++FW+ T +C T VW+ + E
Sbjct: 337 VKAIAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSKNV--NELV 394
Query: 778 LVTGSMDQELRVWK 819
G ++ VWK
Sbjct: 395 STHGYSQNQIIVWK 408
Score = 44.8 bits (101), Expect = 8e-05
Identities = 28/141 (19%), Positives = 63/141 (44%), Gaps = 2/141 (1%)
Frame = +1
Query: 277 IAVGACEHVIIWDMKLGEKAQVLP-GENVVVTQLAASPTGNHMAVGLFDGNINVFELTNN 453
+AVG V +W+ + ++ G + V + + G H+A+G G + ++++
Sbjct: 182 LAVGLGNCVYLWNACSSKVTKLCDLGVDETVCSVGWALRGTHLAIGTSSGTVQIWDVLRC 241
Query: 454 EVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKV-RFSGHKGVITSVS 630
+ + GH+ + L + L SGS+D ++ D+ ++ V + GHK I +
Sbjct: 242 KNIRTMEGHRLRVGALAWSSS--VLSSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLK 299
Query: 631 FINGKNCIVTSSKDTFVKFWD 693
+ + + + D + W+
Sbjct: 300 WSSDNRELASGGNDNKLFVWN 320
Score = 40.3 bits (90), Expect = 0.002
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = +1
Query: 514 QGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWD 693
+G L G+ V +WDV+ GH+ + ++++ + + + S+D + D
Sbjct: 220 RGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAW--SSSVLSSGSRDKSILQRD 277
Query: 694 IETK--HCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTEDV 840
I T+ H K L GH+ E+ + R L +G D +L VW + T+ V
Sbjct: 278 IRTQEDHVSK-LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPV 327
Score = 38.7 bits (86), Expect = 0.005
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 4/164 (2%)
Frame = +1
Query: 343 LPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGH 522
L G + L S +A G D + V+ + + V F H +A+ + +
Sbjct: 288 LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHF 347
Query: 523 RLVS---GSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSS-KDTFVKFW 690
L++ G+ D + W+ + T + V V N + T + W
Sbjct: 348 GLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSKNVNELVSTHGYSQNQIIVW 407
Query: 691 DIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
T TL GH V + + + +VTG+ D+ LR W +
Sbjct: 408 KYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 52.4 bits (120), Expect = 4e-07
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Frame = +1
Query: 385 PTGNHMAVGLFDGNINVFELTNNEVVC---VFAGHKSAITCLQFDDQGHRLVSGSKDTEV 555
P+ N +A GL DG+++++ ++ + HK + ++F D G R+V+ S D +
Sbjct: 16 PSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFIDDGQRIVTASADCSI 75
Query: 556 ILWDVISETG-KVRF--SGHKGVITSVSFINGKNCIVTSSKDT-FVKFWDIETKHCFKTL 723
+ DV ETG +V + H+ + ++ IN + S D VK WD + C
Sbjct: 76 LATDV--ETGAQVAHLENAHEDAVNTL--INVTETTIASGDDKGCVKIWDTRQRSCSHEF 131
Query: 724 GGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
H+ + + LV S D L V L
Sbjct: 132 NAHEDYISGMTFASDSMKLVVTSGDGTLSVCNL 164
Score = 29.1 bits (62), Expect = 4.2
Identities = 30/194 (15%), Positives = 74/194 (38%), Gaps = 3/194 (1%)
Frame = +1
Query: 250 TLNGISGRYIAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGN 426
TL ++ IA G + + IWD + + ++ + + + V DG
Sbjct: 99 TLINVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGT 158
Query: 427 INVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVIL--WDVISETGKVRFS 600
++V L ++V + + + G +++ G+++ ++L W + RF
Sbjct: 159 LSVCNLRTSKVQSQSEFSEDELLSVVIMKNGRKVICGTQNGTLLLYSWGFFKDCSD-RFV 217
Query: 601 GHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYL 780
++ ++T + + I + +G H + L ++++L
Sbjct: 218 DLAPNSVDALLKLDEDRLITGCDNGIISLVGILPNRIIQPIGSHDYPIEDLALSHDKKFL 277
Query: 781 VTGSMDQELRVWKL 822
+ + D L++W L
Sbjct: 278 GSTAHDSMLKLWNL 291
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/95 (28%), Positives = 51/95 (53%)
Frame = +1
Query: 595 FSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEER 774
F+GH + +S+ + +++SS D V+ WDIET+ C K + +E
Sbjct: 515 FTGHLDDVLDLSWSRSQ-LLLSSSMDKTVRLWDIETQSCLKLFAHNDYVTCVQFNPLDED 573
Query: 775 YLVTGSMDQELRVWKLNWTEDVKDDDXLKHQLEIV 879
Y ++GS+D ++R+W ++ + V+ +D LK + V
Sbjct: 574 YFISGSLDAKIRIWNISNRQVVEWND-LKEMVTAV 607
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 51.6 bits (118), Expect = 7e-07
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +1
Query: 421 GNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVS-GSKDTEVILWDVISETGKVRF 597
G +++F + +V+ F A T L F Q + +++ G +D+ + +++V + K +
Sbjct: 841 GKVSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNVIAIGMEDSTIHIYNVRVDEVKSKL 900
Query: 598 SGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIET 702
GH+ IT ++F N +V+S D + FW I+T
Sbjct: 901 KGHQKRITGLAFSTALNILVSSGADAQICFWSIDT 935
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 367 TQLAASPTGNHM-AVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
T LA P N++ A+G+ D I+++ + +EV GH+ IT L F + LVS
Sbjct: 865 TFLAFHPQDNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGA 924
Query: 544 DTEVILWDV 570
D ++ W +
Sbjct: 925 DAQICFWSI 933
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +1
Query: 604 HKGVITSVSFINGKN--CIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEE-- 771
H G + ++F N C++T D +K WD+ + F T GH V++ +E
Sbjct: 451 HVGAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGRKHF-TFEGHDAPVYSICPHYKENI 509
Query: 772 RYLVTGSMDQELRVW 816
+++ + ++D +++ W
Sbjct: 510 QFIFSTAIDGKIKAW 524
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 51.2 bits (117), Expect = 9e-07
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = +1
Query: 517 GHRLVSGSKDTEVILWDVISETGKV--RFSGHKGVITSVSFINGKNCIVTSSKDTFVKFW 690
G L+S SKD++ +L + ETG F GHKG + S N ++S D K W
Sbjct: 31 GFFLISASKDSQPMLRN--GETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLW 88
Query: 691 DIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
D T + H+ V A ++ +YL+TG ++ LRV+ LN
Sbjct: 89 DALTGDVLHSFE-HKHIVRACAFSQDTKYLITGGFEKILRVFDLN 132
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +1
Query: 469 FAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFS-GHKGVITSVSFINGK 645
F GHK A+ D+ R S S D LWD + TG V S HK ++ + +F
Sbjct: 57 FEGHKGAVWSSCLDNNALRAASASADFSAKLWDAL--TGDVLHSFEHKHIVRACAFSQDT 114
Query: 646 NCIVTSSKDTFVKFWDI 696
++T + ++ +D+
Sbjct: 115 KYLITGGFEKILRVFDL 131
Score = 37.5 bits (83), Expect = 0.012
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +1
Query: 268 GRYIAVGACEHVIIWDMK-LG-EKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFE 441
GRYI V WD G K+ +P N+ L +GN G D + +F+
Sbjct: 199 GRYITTADGSTVKFWDANHFGLVKSYDMPC-NIESASLEPK-SGNKFVAGGEDMWVRLFD 256
Query: 442 L-TNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILW 564
T E+ C GH + C++F G SGS+D + +W
Sbjct: 257 FHTGKEIGCN-KGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
Score = 33.1 bits (72), Expect = 0.26
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 184 LRYAPTGSFNIIASAD--CNSTHVTLNGISG-RYIAVGACEHVIIWDMKLGEKAQVLPGE 354
+++ F ++ S D CN +L SG +++A G V ++D G++ G
Sbjct: 210 VKFWDANHFGLVKSYDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGH 269
Query: 355 NVVVTQLAASPTGNHMAVGLFDGNINVFE 441
+ V + +PTG A G DG I +++
Sbjct: 270 HGPVHCVRFAPTGESYASGSEDGTIRIWQ 298
Score = 31.9 bits (69), Expect = 0.59
Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 1/134 (0%)
Frame = +1
Query: 421 GNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFS 600
G + ++++ + ++V KS +T + G R ++ + + V WD + G V+
Sbjct: 168 GGVRLWDVRSGKIVQTLET-KSPVTSAEVSQDG-RYITTADGSTVKFWDA-NHFGLVKSY 224
Query: 601 GHKGVITSVSFI-NGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERY 777
I S S N V +D +V+ +D T GH V
Sbjct: 225 DMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGES 284
Query: 778 LVTGSMDQELRVWK 819
+GS D +R+W+
Sbjct: 285 YASGSEDGTIRIWQ 298
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 50.8 bits (116), Expect = 1e-06
Identities = 40/184 (21%), Positives = 77/184 (41%), Gaps = 4/184 (2%)
Frame = +1
Query: 277 IAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNE 456
+ GA E + WD+ G+ + + P G + G+ D +I +++L E
Sbjct: 335 LTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWDLDGRE 394
Query: 457 VVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFI 636
C ++ + D G LVS KD+ + L+D E R + +ITS S
Sbjct: 395 KECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFD--REATVERLIEEEDMITSFSLS 452
Query: 637 NGKNCIVTSSKDTFVKFWDIE-TKHCFKTLGGHQME---VWAAVLLKEERYLVTGSMDQE 804
N I+ + + ++ W+IE GH+ + + ++ ++ +GS D +
Sbjct: 453 NDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQ 512
Query: 805 LRVW 816
+ +W
Sbjct: 513 VYIW 516
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/151 (22%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Frame = +1
Query: 268 GRYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELT 447
G+++ V C+ +I + L E ++T + S ++ V L + I ++ +
Sbjct: 415 GKWL-VSVCKDSVISLFDREATVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIE 473
Query: 448 NN-EVVCVFAGHKSAITCLQFDDQGHR---LVSGSKDTEVILWDVISETGK--VRFSGHK 609
+ ++V + GHK + ++ G++ + SGS+D++V +W TGK V GH
Sbjct: 474 GDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWH--RSTGKLIVELPGHA 531
Query: 610 GVITSVSFI-NGKNCIVTSSKDTFVKFWDIE 699
G + VS+ + + ++S D ++ W ++
Sbjct: 532 GAVNCVSWSPTNLHMLASASDDGTIRIWGLD 562
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/126 (19%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Frame = +1
Query: 466 VFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISE---TGKVRFSGHKGVITSVSFI 636
+ H + LQF G L S SKD I+W++ ++ + K GH + ++ +
Sbjct: 269 ILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWS 328
Query: 637 NGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
++T + ++ WD+++ C + + + + ++ G D+ + +W
Sbjct: 329 PDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMW 388
Query: 817 KLNWTE 834
L+ E
Sbjct: 389 DLDGRE 394
Score = 44.0 bits (99), Expect = 1e-04
Identities = 35/191 (18%), Positives = 86/191 (45%), Gaps = 5/191 (2%)
Frame = +1
Query: 265 SGRYIAVGACEHV-IIWDMKLGEKAQV---LPGENVVVTQLAASPTGNHMAVGLFDGNIN 432
+G+Y+A + + IIW++ + L G + V + SP + + I
Sbjct: 285 NGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIR 344
Query: 433 VFELTNNEVVCVFA-GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHK 609
+++ + + V ++ G S I+C + D G +++G D + +WD+ +
Sbjct: 345 RWDVDSGDCVHMYEKGGISPISCGWYPD-GQGIIAGMTDRSICMWDLDGREKECWKGQRT 403
Query: 610 GVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTG 789
++ ++ + +V+ KD+ + +D E + L + + + L + +Y++
Sbjct: 404 QKVSDIAMTDDGKWLVSVCKDSVISLFDREAT--VERLIEEEDMITSFSLSNDNKYILVN 461
Query: 790 SMDQELRVWKL 822
++QE+R+W +
Sbjct: 462 LLNQEIRLWNI 472
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 50.8 bits (116), Expect = 1e-06
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
+ LAA+ G ++ G G+I ++E+ +++ + GH ++TCL F LVSGS+
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 544 DTEVILWDVI-------SETGKV----RFSGHKGVITSVSF-INGKNC-IVTSSKDTFVK 684
D + +W +I + G F+ H +T + G N I++SS+D K
Sbjct: 141 DGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCK 200
Query: 685 FWDIETKHCFKTL 723
W + K +
Sbjct: 201 VWSLSRGKLLKNI 213
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Frame = +1
Query: 307 IWDMKLGE--KAQVLPGENVVVTQLAASPTGNHMAVGLFD-----GNINVFELTNNEVVC 465
+W + G+ K + P V+ LA P G G D G IN +V+
Sbjct: 201 VWSLSRGKLLKNIIFPS---VINALALDPGGCVFYAGARDSKIYIGAINATSEYGTQVLG 257
Query: 466 VFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWD 567
+ AITCL + G+ L+SGS+D V +WD
Sbjct: 258 SVSEKGKAITCLAYCADGNLLISGSEDGVVCVWD 291
Score = 36.7 bits (81), Expect = 0.021
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 679 VKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
+ W++ T K GH V V ++ LV+GS D +RVW L
Sbjct: 102 IYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 50.4 bits (115), Expect = 2e-06
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 16/229 (6%)
Frame = +1
Query: 181 YLRYAPTGSFNIIASADCNSTHVT-LNGIS-GRYIAVGACE-HVIIWDMKLGEKAQVLPG 351
YL A +GS + + + D + VT +N G +AVG V +WD + + L G
Sbjct: 149 YLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLRG 208
Query: 352 ENVVVTQLAASPTGNH-MAVGLFDGNI-NVFELTNNEVVCVFAGHKSAITCLQFDDQGHR 525
+ +++ + NH + G DG I N + +V + GH + L++ + G++
Sbjct: 209 GHE--SRVGSLAWDNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGNK 266
Query: 526 LVSGSKDTEVILWDVISETGKV------RFSGHKGVITSVSFINGKNCIVTSS---KDTF 678
SG D V +WD + K RF H + ++++ + ++ + D
Sbjct: 267 QASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGK 326
Query: 679 VKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVT--GSMDQELRVWK 819
+KFW+ T C ++ +V + + + ER L++ G +L +WK
Sbjct: 327 IKFWNTHTGACLNSVETGS-QVCSLLWSQSERELLSSHGFTQNQLTLWK 374
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +1
Query: 601 GHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYL 780
GH I +S+ + +++SS D V+ WDIETK C K + +E Y
Sbjct: 504 GHLDAILDLSWSKSQ-LLLSSSMDKTVRLWDIETKTCLKLFAHNDYVTCIQFSPVDENYF 562
Query: 781 VTGSMDQELRVWKL 822
++GS+D ++R+W +
Sbjct: 563 LSGSLDAKIRIWSI 576
Score = 48.4 bits (110), Expect = 6e-06
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Frame = +1
Query: 448 NNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSV 627
+++ VC GH AI L + + L+S S D V LWD+ ++T F+ H +T +
Sbjct: 495 SDKPVCSLKGHLDAILDLSWS-KSQLLLSSSMDKTVRLWDIETKTCLKLFA-HNDYVTCI 552
Query: 628 SFIN-GKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQE 804
F +N ++ S D ++ W I+ +H + H+M V AA + + + GS
Sbjct: 553 QFSPVDENYFLSGSLDAKIRIWSIQDRHVVEWSDLHEM-VTAACYTPDGQGALIGSHKGI 611
Query: 805 LRVWKLNWTEDVK 843
R + TED K
Sbjct: 612 CRAYD---TEDCK 621
Score = 31.5 bits (68), Expect = 0.78
Identities = 12/56 (21%), Positives = 26/56 (46%)
Frame = +1
Query: 667 KDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTE 834
+ T + ++ H + + H+ VW ++ YL +G D+ + VW++ E
Sbjct: 382 RPTGKSYKELSALHMCQEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECE 437
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +1
Query: 415 FDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVR 594
FD V++L + +F GH + + F G+ L SG +D + +WD+
Sbjct: 150 FDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYI 209
Query: 595 FSGHKGVITSVSF-INGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEV 744
H +++ V + + + T+S D V W K+L GH+ +V
Sbjct: 210 IPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKV 260
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/108 (20%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Frame = +1
Query: 307 IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKS 486
+WD++ + G V + SP G H+A G D +++L +++ + H +
Sbjct: 156 VWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVN 215
Query: 487 AITCLQFDDQ-GHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSV 627
++ ++++ Q + L + S D V +W + GH+ + S+
Sbjct: 216 LVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASL 263
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Frame = +1
Query: 532 SGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHC 711
S D+ +WD+ + + F GH + SV F + + +D + WD+ +
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKL 206
Query: 712 FKTLGGHQMEVWAAVLLKEERY-LVTGSMDQELRVW 816
+ H V +ERY L T S D + +W
Sbjct: 207 LYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIW 242
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = +1
Query: 658 TSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
+S D+ + WD+ T GH +V + +L +G D + R+W L
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDL 201
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 50.0 bits (114), Expect = 2e-06
Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 17/230 (7%)
Frame = +1
Query: 181 YLRYAPTGSFNIIASADCNSTHVT-LNGIS-GRYIAVGACE-HVIIWDMKLGEKAQVLPG 351
YL A +GS + + D VT +N G +A+G V +WD + + L G
Sbjct: 115 YLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLRG 174
Query: 352 ENVVVTQLAASPTGNH-MAVGLFDGNI-NVFELTNNEVVCVFAGHKSAITCLQFDDQGHR 525
+ +++ + NH + G DG I N + +V + GH + L++ + G +
Sbjct: 175 GHE--SRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGKK 232
Query: 526 LVSGSKDTEVILWDVISETGK-------VRFSGHKGVITSVSFINGKNCIVTSS---KDT 675
L SG D V +WD S RF H + ++++ + ++ + D
Sbjct: 233 LASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDG 292
Query: 676 FVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVT--GSMDQELRVWK 819
+KFW+ T C ++ +V + + K ER L++ G +L +WK
Sbjct: 293 KIKFWNTHTGACLNSVETGS-QVCSLLWSKSERELLSSHGFTQNQLTLWK 341
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/105 (30%), Positives = 50/105 (47%)
Frame = +1
Query: 262 ISGRYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFE 441
+ G Y+ + + ++D+K EK + T P G+ +AVGL DG+I +
Sbjct: 439 VKGSYLFSTSGGKIAVFDLKNFEKVASFGSPTPMATYFIFIP-GDLLAVGLDDGSIFIHC 497
Query: 442 LTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVIS 576
L++ +V GH ITCL F + LVS D ++ LW S
Sbjct: 498 LSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKS 542
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Frame = +1
Query: 409 GLFDGNINVFELTNNEVVCVFA-GHKSAITCLQFDDQGHRLVS-GSKDTEVILWDVISET 582
G FD + V++ ++VV F K T + H L++ G+ D +V L D+ S
Sbjct: 122 GSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSHTLIAAGTDDVQVRLCDIASGA 181
Query: 583 GKVRFSGHKGVITSVSFINGKNCIV-TSSKDTFVKFWDIETKHCFKTLGGHQMEV 744
SGH+ + SV + ++ T D ++FWDI CF+ L Q ++
Sbjct: 182 FSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVLDNSQTQL 236
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 49.6 bits (113), Expect = 3e-06
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCI 654
GH++A+ C D G +++GS D V +W + + GH+G IT ++ + I
Sbjct: 243 GHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFI 302
Query: 655 VTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLK---EERYLVTGSMDQELRVW 816
++S D ++ W + L GH V A L++ S D R+W
Sbjct: 303 ASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
Score = 48.4 bits (110), Expect = 6e-06
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +1
Query: 592 RFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEE 771
R GH+ + ++T S D VK W ++T +C + GH+ ++ +
Sbjct: 240 RLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNN 299
Query: 772 RYLVTGSMDQELRVWKL 822
++ + S D +RVW+L
Sbjct: 300 IFIASASNDCVIRVWRL 316
Score = 46.8 bits (106), Expect = 2e-05
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Frame = +1
Query: 235 NSTHVTLNGISGRYIAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVG 411
N+ + + SGRY+ G+ + ++ +W M G +T LA S +A
Sbjct: 246 NAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASA 305
Query: 412 LFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQ---GHRLVSGSKDTEVILWD 567
D I V+ L + V V GH A+T + F + ++L+S S D +WD
Sbjct: 306 SNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWD 360
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +1
Query: 715 KTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
K L GH+ V+ A+L + RY++TGS D+ ++VW ++
Sbjct: 239 KRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMD 275
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 49.6 bits (113), Expect = 3e-06
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Frame = +1
Query: 430 NVFELTNNEVVCVFAG--HKSAITCLQFDDQGHRLVSG-----SKDTEVILWDV---ISE 579
N FE+ ++ CV+ G KS I L+ +++ G S+ T +L ISE
Sbjct: 294 NEFEVAESDSSCVYFGMNDKSQIEPLKTENEKIEKSRGLLRKKSESTCAVLPSKVFSISE 353
Query: 580 TGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDI-ETKHCFKTLGGHQMEVWAAV 756
T + F GH G I +S+ + K +++SS D V+ W + + C + A
Sbjct: 354 TPQHEFRGHTGEILDLSW-SEKGFLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAF 412
Query: 757 LLKEERYLVTGSMDQELRVWKLN 825
++ Y ++GS+D ++R+W ++
Sbjct: 413 NPVDDNYFISGSIDGKVRIWDVS 435
Score = 46.0 bits (104), Expect = 3e-05
Identities = 39/133 (29%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Frame = +1
Query: 469 FAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFIN-GK 645
F GH I L + ++G L+S S D V LW V S +R HK +T V+F
Sbjct: 359 FRGHTGEILDLSWSEKGF-LLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDD 417
Query: 646 NCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
N ++ S D V+ WD+ Q+ V A + + V GSM E R +
Sbjct: 418 NYFISGSIDGKVRIWDVSQFRVVDYTDIRQI-VTALCYRPDGKGAVVGSMTGECRFYHTT 476
Query: 826 WTEDVKDDDXLKH 864
+ D D H
Sbjct: 477 DNQLQLDRDISLH 489
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Frame = +1
Query: 445 TNNEVVCVFAGHKSAITCLQFDD-QGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT 621
+++E + VF+ HKS +TC+ F+ + +SGS D +V +WDV S+ V ++ + ++T
Sbjct: 393 SSDECIRVFS-HKSFVTCVAFNPVDDNYFISGSIDGKVRIWDV-SQFRVVDYTDIRQIVT 450
Query: 622 SVSF-INGKNCIVTS 663
++ + +GK +V S
Sbjct: 451 ALCYRPDGKGAVVGS 465
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 241 THVTLNGISGRYIAVGACE-HVIIWDMKLGEKAQVLPGENV--VVTQLAASPTGNHMAVG 411
T V N + Y G+ + V IWD+ + +V+ ++ +VT L P G VG
Sbjct: 408 TCVAFNPVDDNYFISGSIDGKVRIWDVS---QFRVVDYTDIRQIVTALCYRPDGKGAVVG 464
Query: 412 LFDGNINVFELTNNEV 459
G + T+N++
Sbjct: 465 SMTGECRFYHTTDNQL 480
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/76 (34%), Positives = 39/76 (51%)
Frame = +1
Query: 493 TCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKD 672
T F G L +G+ + V +WDV S+ +F GH G ITS+SF + T++ D
Sbjct: 358 TAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD 417
Query: 673 TFVKFWDIETKHCFKT 720
V+ WD+ F+T
Sbjct: 418 G-VRLWDLRKLKNFRT 432
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +1
Query: 526 LVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETK 705
+ +G DT +L+D S +GH +TS+ F+ + ++T+S D V+ W
Sbjct: 237 IATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSED 296
Query: 706 HCF---KTLGGHQMEVWAAVLLKEERYLVTGSMD 798
+ TL H EV A + +Y V+ S+D
Sbjct: 297 GNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLD 330
Score = 39.5 bits (88), Expect = 0.003
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 8/208 (3%)
Frame = +1
Query: 247 VTLNGISGRYIAVGACEHVIIWDMKLGE-KAQVLPG-ENVV-VTQLAASPTGNHMAVGLF 417
VT++ + +++ +D+ G AQV EN V T A P G + G
Sbjct: 315 VTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTA 374
Query: 418 DGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRF 597
+ ++++ + V F GH IT + F + G+ L + + D V LWD+ F
Sbjct: 375 QSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD-GVRLWDLRKLKNFRTF 433
Query: 598 SGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETK---HCFKTLG--GHQMEVWAAVLL 762
SV F + + + ++ D V F K + KTL + +
Sbjct: 434 DFPDA--NSVEFDHSGSYLGIAASDIRV-FQAASVKAEWNPIKTLPDLSGTGKATSVKFG 490
Query: 763 KEERYLVTGSMDQELRVWKLNWTEDVKD 846
+ +Y+ GSMD+ LR++ L ++ +D
Sbjct: 491 LDSKYIAVGSMDRNLRIFGLPDDDNTED 518
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +1
Query: 604 HKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLV 783
+K I S+ ++ K+ I T DT +D + TL GH +V + + + ++
Sbjct: 221 NKPGIFSMDILHSKDVIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVL 280
Query: 784 TGSMDQELRVW 816
T S D+ +R+W
Sbjct: 281 TASSDKTVRIW 291
Score = 36.7 bits (81), Expect = 0.021
Identities = 39/199 (19%), Positives = 79/199 (39%), Gaps = 7/199 (3%)
Frame = +1
Query: 277 IAVGACEHV-IIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVF---EL 444
IA G + +++D G+ L G + VT + + + D + ++ E
Sbjct: 237 IATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSED 296
Query: 445 TNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISET--GKVRFSGHKGV- 615
N H + + + VS S D+ +D+ S +V + V
Sbjct: 297 GNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVN 356
Query: 616 ITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSM 795
T+ +F + T + + VK WD++++ GGH E+ + + +L T ++
Sbjct: 357 YTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAAL 416
Query: 796 DQELRVWKLNWTEDVKDDD 852
D +R+W L ++ + D
Sbjct: 417 D-GVRLWDLRKLKNFRTFD 434
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 49.2 bits (112), Expect = 4e-06
Identities = 31/147 (21%), Positives = 70/147 (47%), Gaps = 5/147 (3%)
Frame = +1
Query: 268 GRYIAVGACE-HVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFEL 444
G YI++G V +WD ++ + + G LA + ++ G D NI ++
Sbjct: 227 GSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAWN--SRILSSGSRDRNILQHDI 284
Query: 445 -TNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT 621
++ V GHKS + L++ L SG D ++++W+ S+ ++ + H +
Sbjct: 285 RVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVK 344
Query: 622 SVSFINGKNCIVTS---SKDTFVKFWD 693
++++ ++ ++ S + D ++FW+
Sbjct: 345 AITWSPHQSSLLASGGGTADRCIRFWN 371
Score = 34.7 bits (76), Expect = 0.084
Identities = 39/203 (19%), Positives = 83/203 (40%), Gaps = 10/203 (4%)
Frame = +1
Query: 244 HVTLNGI---SGRYIAVGACEHVIIW-DMKL-GEKAQVLPGENVVVTQLAASPTGNHMAV 408
H T G+ + R ++ G+ + I+ D+++ + L G V L S +A
Sbjct: 256 HQTRTGVLAWNSRILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELAS 315
Query: 409 GLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVS---GSKDTEVILWDVISE 579
G D + V+ + + + H +A+ + + L++ G+ D + W+ +
Sbjct: 316 GGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNT-TN 374
Query: 580 TGKVRFSGHKGVITSVSFINGKNCIVTSS--KDTFVKFWDIETKHCFKTLGGHQMEVWAA 753
++ + ++++ N IV++ + W + TL GH M V
Sbjct: 375 GNQLNSIDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYL 434
Query: 754 VLLKEERYLVTGSMDQELRVWKL 822
+ + +VTG+ D+ LR W +
Sbjct: 435 ATSPDGQTIVTGAGDETLRFWNV 457
Score = 29.9 bits (64), Expect = 2.4
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +1
Query: 547 TEVILWDVI-SETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTL 723
T V LW S+ K+ G + SV + + I + V+ WD +T+
Sbjct: 194 TCVYLWTASNSKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTM 253
Query: 724 GGHQMEVWAAVLLKEERYLVTGSMDQEL 807
GGHQ VL R L +GS D+ +
Sbjct: 254 GGHQTR--TGVLAWNSRILSSGSRDRNI 279
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 49.2 bits (112), Expect = 4e-06
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGK-NC 651
G+ I ++F G +V+GS D + ++D+ + +R H + +V F + N
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 652 IVTSSKDTFVKFWDIETKHCF----KTLG---GHQMEVWAAVLLKEERYLVTGSMDQELR 810
I++ S D K WD + CF K G GH V + RY ++ DQ ++
Sbjct: 287 ILSGSDDNLCKVWD---RRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIK 343
Query: 811 VWKL 822
+W +
Sbjct: 344 LWDI 347
Score = 48.8 bits (111), Expect = 5e-06
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Frame = +1
Query: 382 SPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQF-DDQGHRLVSGSKDTEVI 558
S G + G D +I V++L N V H S + + F D+ G+ ++SGS D
Sbjct: 238 STDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCK 297
Query: 559 LWDVISETGKVRFSGHK-GVITSVSFINGKN---CIVTSSKDTFVKFWDI 696
+WD G+ + +G G + V+FI+ + +++ KD +K WDI
Sbjct: 298 VWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDI 347
Score = 33.1 bits (72), Expect = 0.26
Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +1
Query: 268 GRYIAVGACEHVI-IWDMKLGEKA-QVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFE 441
GR + G+ + I ++D++ + + + + V T A +GN + G D V++
Sbjct: 241 GREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWD 300
Query: 442 ----LTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDV 570
+ ++ V GH +T + G +S KD + LWD+
Sbjct: 301 RRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDI 347
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 379 ASPTGN-HMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEV 555
A TG ++ G D ++ +++L + + V V H S + + L+S S D ++
Sbjct: 408 AHSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWDGDL 467
Query: 556 ILWD 567
+ W+
Sbjct: 468 VKWE 471
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 49.2 bits (112), Expect = 4e-06
Identities = 43/184 (23%), Positives = 80/184 (43%)
Frame = +1
Query: 268 GRYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELT 447
GR ++ V +W++ GE Q L G + VT +A + D + +
Sbjct: 84 GRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAID--NEDIVSSSVDQTLKRWR-- 139
Query: 448 NNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSV 627
N ++V + H+S I + G LVSGS D + LW +T SGH + +
Sbjct: 140 NGQLVESWDAHQSPIQAVIRLPSGE-LVSGSSDASLKLWK--GKTSLQTLSGHTDTVRGL 196
Query: 628 SFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQEL 807
+ + +++S D ++ W + + + + GH V+ +V +V+ S D+
Sbjct: 197 AVMPDLG-FLSASHDGSIRLWALSGEVLLEMV-GHTSLVY-SVDAHSSGLIVSASEDRHA 253
Query: 808 RVWK 819
++WK
Sbjct: 254 KIWK 257
Score = 46.0 bits (104), Expect = 3e-05
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Frame = +1
Query: 463 CVFAGHKSAIT--CLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFI 636
C GH + C+ D+ + + S+D + +W + + K +++ K ++ SF+
Sbjct: 14 CELHGHDDDVRGICVCNDEN---IATSSRDRTIRVWS-LDPSDKRKYTSEKILLGHTSFV 69
Query: 637 NG-----------KNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLV 783
+ +V+ S DTFV W++ +TL GHQM+V + E+ +V
Sbjct: 70 GPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNED--IV 127
Query: 784 TGSMDQELRVWK 819
+ S+DQ L+ W+
Sbjct: 128 SSSVDQTLKRWR 139
Score = 31.9 bits (69), Expect = 0.59
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Frame = +1
Query: 601 GHKGVITSVSFINGKNCIVTSSKDTFVKFWDIET--KHCF---KTLGGHQMEVWAAVLLK 765
GH + + N +N I TSS+D ++ W ++ K + K L GH V +
Sbjct: 18 GHDDDVRGICVCNDEN-IATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIP 76
Query: 766 E-----ERYLVTGSMDQELRVWKLNWTEDVKDDDXLK-HQLEI 876
E LV+GSMD + VW L E+++ LK HQ+++
Sbjct: 77 PTDEYPEGRLVSGSMDTFVFVWNLMNGENIQ---TLKGHQMQV 116
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 49.2 bits (112), Expect = 4e-06
Identities = 43/184 (23%), Positives = 80/184 (43%)
Frame = +1
Query: 268 GRYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELT 447
GR ++ V +W++ GE Q L G + VT +A + D + +
Sbjct: 84 GRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAID--NEDIVSSSVDQTLKRWR-- 139
Query: 448 NNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSV 627
N ++V + H+S I + G LVSGS D + LW +T SGH + +
Sbjct: 140 NGQLVESWDAHQSPIQAVIRLPSGE-LVSGSSDASLKLWK--GKTSLQTLSGHTDTVRGL 196
Query: 628 SFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQEL 807
+ + +++S D ++ W + + + + GH V+ +V +V+ S D+
Sbjct: 197 AVMPDLG-FLSASHDGSIRLWALSGEVLLEMV-GHTSLVY-SVDAHSSGLIVSASEDRHA 253
Query: 808 RVWK 819
++WK
Sbjct: 254 KIWK 257
Score = 46.0 bits (104), Expect = 3e-05
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Frame = +1
Query: 463 CVFAGHKSAIT--CLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFI 636
C GH + C+ D+ + + S+D + +W + + K +++ K ++ SF+
Sbjct: 14 CELHGHDDDVRGICVCNDEN---IATSSRDRTIRVWS-LDPSDKRKYTSEKILLGHTSFV 69
Query: 637 NG-----------KNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLV 783
+ +V+ S DTFV W++ +TL GHQM+V + E+ +V
Sbjct: 70 GPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNED--IV 127
Query: 784 TGSMDQELRVWK 819
+ S+DQ L+ W+
Sbjct: 128 SSSVDQTLKRWR 139
Score = 31.9 bits (69), Expect = 0.59
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Frame = +1
Query: 601 GHKGVITSVSFINGKNCIVTSSKDTFVKFWDIET--KHCF---KTLGGHQMEVWAAVLLK 765
GH + + N +N I TSS+D ++ W ++ K + K L GH V +
Sbjct: 18 GHDDDVRGICVCNDEN-IATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIP 76
Query: 766 E-----ERYLVTGSMDQELRVWKLNWTEDVKDDDXLK-HQLEI 876
E LV+GSMD + VW L E+++ LK HQ+++
Sbjct: 77 PTDEYPEGRLVSGSMDTFVFVWNLMNGENIQ---TLKGHQMQV 116
>At4g31160.1 68417.m04423 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
KIAA0800 protein, Homo sapiens GI:3882321 EMBL:AB018343
Length = 1846
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +1
Query: 352 ENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQ-FDDQGHRL 528
E + T +A NH+AVG G I +FE ++ ++ +GH++ +T +Q + + +L
Sbjct: 1428 ETALFTCIALLGGTNHIAVGSHAGEIKIFEASSGSMLESVSGHQAPVTLVQPYVSRDTQL 1487
Query: 529 VSGSKDTEVILWDVISETGKVRFS 600
+ S ++V LWD S TG R S
Sbjct: 1488 LLSSSSSDVQLWDASSITGGPRHS 1511
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 469 FAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVS-FINGK 645
F + TC+ + + GS E+ +++ S + SGH+ +T V +++
Sbjct: 1425 FRDETALFTCIALLGGTNHIAVGSHAGEIKIFEASSGSMLESVSGHQAPVTLVQPYVSRD 1484
Query: 646 NCIVTSSKDTFVKFWD 693
++ SS + V+ WD
Sbjct: 1485 TQLLLSSSSSDVQLWD 1500
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 48.8 bits (111), Expect = 5e-06
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Frame = +1
Query: 262 ISGRYIAVGACE-HVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVF 438
+ G ++AVG V IWD ++ + + G + V LA + ++ G D +I
Sbjct: 262 LRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWG--SSVLSSGSRDKSILQR 319
Query: 439 ELTNNEV-VCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGV 615
++ E V AGHKS + L++ L SG D + +W+ S +++S H
Sbjct: 320 DIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAA 379
Query: 616 ITSVSF---INGKNCIVTSSKDTFVKFWDIET 702
+ ++++ ++G + D ++FW+ T
Sbjct: 380 VKAIAWSPHVHGLLASGGGTADRCIRFWNTTT 411
Score = 39.5 bits (88), Expect = 0.003
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Frame = +1
Query: 394 NHMAVGLFDGN-INVFELTNNEVVCVF-AGHKSAITCLQFDDQGHRLVSGSKDTEVILWD 567
N +AVGL GN + ++ +++V + G + ++ + + +G L G+ +V +WD
Sbjct: 223 NVLAVGL--GNCVYLWNACSSKVTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGKVQIWD 280
Query: 568 VISETGKVR-FSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETK--HCFKTLGGHQM 738
S + R GH+ + ++++ G + + + S+D + DI + H K L GH+
Sbjct: 281 A-SRCKRTRTMEGHRLRVGALAW--GSSVLSSGSRDKSILQRDIRCQEDHVSK-LAGHKS 336
Query: 739 EVWAAVLLKEERYLVTGSMDQELRVWKLNWTEDV 840
EV + R L +G D L VW + T+ V
Sbjct: 337 EVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPV 370
Score = 39.1 bits (87), Expect = 0.004
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 4/164 (2%)
Frame = +1
Query: 343 LPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGH 522
L G V L S +A G D + V+ + + V ++ H +A+ + + H
Sbjct: 331 LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVH 390
Query: 523 RLVS---GSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSS-KDTFVKFW 690
L++ G+ D + W+ + T V N + T + W
Sbjct: 391 GLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQVCNLAWSKNVNELVSTHGYSQNQIIVW 450
Query: 691 DIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
T TL GH V + + + +VTG+ D+ LR W +
Sbjct: 451 KYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 48.4 bits (110), Expect = 6e-06
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRF-SGHKGVITSVSFI--NGK 645
GH+ + ++F+ G LVSGS D +++LW+ +S + K+ + SGH + FI
Sbjct: 53 GHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFTDD 112
Query: 646 NCIVTSSKDTFVKFWDI--ETKHCFKTLGGHQMEVWAAVLL 762
I+TS D V+ I K K LG H V+ +L
Sbjct: 113 RTIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKLAVL 153
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 247 VTLNGISGRYIAVGA-CEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDG 423
V G + Y+ G+ C H+ IW K G+ + + G+ VV QL + P +A +
Sbjct: 326 VNFFGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLESHPHIPLLASCGIEK 385
Query: 424 NINVFELTNNEVV 462
++ ++ +N+V+
Sbjct: 386 SVKLWTPMSNDVL 398
Score = 32.7 bits (71), Expect = 0.34
Identities = 20/101 (19%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Frame = +1
Query: 592 RFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWD-IETKHCFKTLGGHQMEVWAA--VLL 762
+ +GH+G + +V F + + +V+ S D + W+ + GH V+ +
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPF 109
Query: 763 KEERYLVTGSMDQELRVWKLNWTEDVKDDDXLKHQLEIVKL 885
++R ++T D ++R+ ++ V+ +H + KL
Sbjct: 110 TDDRTIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKL 150
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 48.4 bits (110), Expect = 6e-06
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
Frame = +1
Query: 508 DDQGHRLVSGSKDTEVILWDVISE-TGKVRFS---GHKGVITSVSFINGKNCIVTSSKDT 675
D+ GH + S + E T K RF H I +S+I G +C++T+S D
Sbjct: 91 DEDGHVSLFNSSSKKFASSATHQENTEKARFRDWIAHYNAIFDISWIKGDSCLLTASGDQ 150
Query: 676 FVKFWDIETKHCFKTLGGHQMEVWAAVL-LKEERYLVTGSMDQELRVWKL 822
+K WD+E C L GH V + LV+GS D +W L
Sbjct: 151 TIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 382 SPTGNHMAVGLFDGNINVFELTNNEV-VCVFAGHKSAITCLQFD-DQGHRLVSGSKDTEV 555
SP G ++ G DGN ++++ +V + GH +T + + + ++ + S D V
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTV 406
Query: 556 ILWDV 570
LW++
Sbjct: 407 RLWNI 411
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 48.4 bits (110), Expect = 6e-06
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +1
Query: 421 GNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVS-GSKDTEVILWDVISETGKVRF 597
G +++F + +V+ F A T L F Q + +++ G +D+ + +++V + K +
Sbjct: 852 GKVSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKL 911
Query: 598 SGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIET 702
GH+ IT ++F N +V+S D + FW ++
Sbjct: 912 KGHQKHITGLAFSTALNILVSSGADAQLFFWTADS 946
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Frame = +1
Query: 589 VRFSGHKGVITSVSFI--NGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLL 762
+ H G + ++F N + C+VT D +K WD+ K F T GH+ V++
Sbjct: 447 LEIDAHVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDLSGKKLF-TFEGHEAPVYSICPH 505
Query: 763 KEE--RYLVTGSMDQELRVW 816
++E +++ + ++D +++ W
Sbjct: 506 QKENIQFIFSTALDGKIKAW 525
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 367 TQLAASPTGNHM-AVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
T LA P N++ A+G+ D +I+++ + +EV GH+ IT L F + LVS
Sbjct: 876 TFLAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGA 935
Query: 544 DTEVILW 564
D ++ W
Sbjct: 936 DAQLFFW 942
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 47.6 bits (108), Expect = 1e-05
Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 17/230 (7%)
Frame = +1
Query: 181 YLRYAPTGSFNIIASADCNSTHVT-LNGIS-GRYIAVGACE-HVIIWDMKLGEKAQVLPG 351
YL A +GS + + + D + VT +N G +AVG V +WD + + L G
Sbjct: 146 YLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLIG 205
Query: 352 ENVVVTQLAASPTGNH-MAVGLFDGNI-NVFELTNNEVVCVFAGHKSAITCLQFDDQGHR 525
+ +++ + NH + G DG I N + +V + GH + L++ + G +
Sbjct: 206 GHE--SRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIVGTYLGHTEEVCGLKWSESGKK 263
Query: 526 LVSGSKDTEVILWDVISETGKV-------RFSGHKGVITSVSFINGKNCIVTSS---KDT 675
L SG V +WD S RF H + ++++ + ++ + D
Sbjct: 264 LASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAWCPFQATLLATGGGVGDG 323
Query: 676 FVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVT--GSMDQELRVWK 819
+KFW+ T C ++ +V + + + ER L++ G +L +WK
Sbjct: 324 KIKFWNTHTGACLNSVETGS-QVCSLLWSQRERELLSSHGFTQNQLTLWK 372
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 15/133 (11%)
Frame = +1
Query: 469 FAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDV---------------ISETGKVRFSG 603
+ H L G L +G D V LWD+ + ++ F+G
Sbjct: 202 YTRHNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHVQVNKLKNNQVKDSVHCAFTG 261
Query: 604 HKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLV 783
H G+++S+ F G + + S D + W+ E + ++ GHQ E+ + L ER L
Sbjct: 262 HCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDALGRERVLS 321
Query: 784 TGSMDQELRVWKL 822
G D+ ++++K+
Sbjct: 322 VG-RDRTMQLYKV 333
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +1
Query: 424 NINVFELTNNEVV----CVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKV 591
++ V +L NN+V C F GH ++ L F + L SGS D + +W+ T
Sbjct: 240 HVQVNKLKNNQVKDSVHCAFTGHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIE 299
Query: 592 RFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDI 696
GH+ + S+ + G+ +++ +D ++ + +
Sbjct: 300 SCFGHQSELLSIDAL-GRERVLSVGRDRTMQLYKV 333
Score = 31.5 bits (68), Expect = 0.78
Identities = 32/149 (21%), Positives = 61/149 (40%)
Frame = +1
Query: 427 INVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGH 606
+ V +L +++ V H+ ++T + D R S SKD ++ WDV S
Sbjct: 127 LRVQDLQSSDKFRVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWDVSS---------- 176
Query: 607 KGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVT 786
GK+ D +K ++ + + T H + A + + RYL T
Sbjct: 177 -----------GKSDEYKWPSDEVLKSHGLKFQESWYT--RHNKQSLALAVSSDGRYLAT 223
Query: 787 GSMDQELRVWKLNWTEDVKDDDXLKHQLE 873
G +D + +W + E V+ + +Q++
Sbjct: 224 GGVDCHVHLWDIRTREHVQVNKLKNNQVK 252
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/129 (20%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Frame = +1
Query: 463 CVFAGHKSAITCLQFDDQGHRLVS-GSKDTEVILWDVISETGKVR-FSGHKGVITSVSFI 636
C+F KS++T L+F +++ G+ D + + ++ E ++ +GH +T F
Sbjct: 166 CIFDQCKSSVTVLKFGHMSSDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFS 225
Query: 637 NGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
+ I +SS D ++ W++ C + + G + +L G+ ++EL V+
Sbjct: 226 SNNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQYCIRFHPVNNNFLSAGNANKELTVF 285
Query: 817 KLNWTEDVK 843
+ +K
Sbjct: 286 NFSTGRIIK 294
Score = 31.9 bits (69), Expect = 0.59
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 391 GNHMAVGLFDGNINVFELTNNEVVCV--FAGHKSAITCLQFDDQGHRLVSGSKDTEVILW 564
G ++ G D N+ ++LT + CV GH+ + C+ ++ + L S VI+W
Sbjct: 416 GEYIVAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMCVAWNHGENLLASSDFYGVVIVW 475
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 400 MAVGLFDGNINVFELTNN-EVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDV 570
+A G DG++ V L V+ GH +T F + S S D + +W++
Sbjct: 188 LAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWEL 245
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 47.2 bits (107), Expect = 1e-05
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Frame = +1
Query: 361 VVTQLAASPTGNHMA-VGLFDGNINVFELTNNE-----VVCVFAGHKSA-ITCLQFDDQG 519
VV Q+ A N M G G+I V++ T++E + GH S +TC F G
Sbjct: 265 VVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTC--FVVGG 322
Query: 520 HRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIE 699
L SGS D + +WD+ + ++ H G +TS+ + C+++SS D +K W
Sbjct: 323 EVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSL--LCWDKCLISSSLDGTIKLWACS 380
Query: 700 TKHCFKTLGGHQMEV 744
K + + E+
Sbjct: 381 ENESLKVVQTRKQEL 395
Score = 46.4 bits (105), Expect = 3e-05
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Frame = +1
Query: 526 LVSGSKDTEVILWDVI-SETGKVRF-----SGHKGVITSVSFINGKNCIVTSSKDTFVKF 687
L +G+ +++W SE+ ++ H G +T F+ G + + S D +K
Sbjct: 279 LFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTC--FVVGGEVLYSGSVDKTIKV 336
Query: 688 WDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTEDVKDDDXLKHQ 867
WD+ T C TL H V + LL ++ L++ S+D +++W + E +K K +
Sbjct: 337 WDLNTLQCRMTLKQHIGTVTS--LLCWDKCLISSSLDGTIKLWACSENESLKVVQTRKQE 394
Query: 868 LEI 876
L +
Sbjct: 395 LSV 397
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/80 (20%), Positives = 38/80 (47%)
Frame = +1
Query: 601 GHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYL 780
GHK I ++ G + + + S D + WD + C +++ ++ A L+ E ++
Sbjct: 185 GHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSI---NLQAEAGSLISEGPWV 241
Query: 781 VTGSMDQELRVWKLNWTEDV 840
G + ++ + + ++DV
Sbjct: 242 FLG-LPNAVKAFNVQNSKDV 260
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 47.2 bits (107), Expect = 1e-05
Identities = 44/198 (22%), Positives = 86/198 (43%), Gaps = 14/198 (7%)
Frame = +1
Query: 268 GRYIAVGACE-HVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNH-MAVGLFDGNI-NVF 438
G +AVG V +WD + L G + +++ + NH + G DG I N
Sbjct: 164 GLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHE--SRVGSLAWNNHILTTGGMDGKIVNND 221
Query: 439 ELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWD-VISETGKV-----RFS 600
+ ++ + GH + L++ + G +L SG D V +WD ++ + RF
Sbjct: 222 VRIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFE 281
Query: 601 GHKGVITSVSFINGKNCIVTSS---KDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEE 771
H + ++++ + ++ + D + FW+ T C ++ +V + + K E
Sbjct: 282 EHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGS-QVCSLLWSKSE 340
Query: 772 RYLVT--GSMDQELRVWK 819
R L++ G +L +WK
Sbjct: 341 RELLSAHGFTQNQLTLWK 358
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +1
Query: 553 VILWDVIS-ETGK-VRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWD-IETKHCFKTL 723
V LWD S T K V G +TS+++ + ++ V+ WD + +H
Sbjct: 132 VYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLR 191
Query: 724 GGHQMEVWAAVLLKEERYLVTGSMDQEL 807
GGH+ V + L L TG MD ++
Sbjct: 192 GGHESRVGS--LAWNNHILTTGGMDGKI 217
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Frame = +1
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRF-SGHKGVITSVSFI--NGKN 648
HK + + F+ G L+SGS D +VILWD + + K+ F SGH I F+ +
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDR 113
Query: 649 CIVTSSKDTFVKFWDIETKHCFKT--LGGHQ 735
IVTS+ D V++ I +T LG HQ
Sbjct: 114 TIVTSAADKQVRYSKILESGQVETSLLGKHQ 144
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 47.2 bits (107), Expect = 1e-05
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 3/149 (2%)
Frame = +1
Query: 394 NHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQ-GHRLVSGSKDTEVILWDV 570
N++A +DG + ++++T + + F H+ + F + +L SGS D V LW+
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWN- 825
Query: 571 ISETGKVRFSGHKGVITSVSFI-NGKNCIVTSSKDTFVKFWDIET-KHCFKTLGGHQMEV 744
I+E + + + V F + + S D +D+ + + L GH V
Sbjct: 826 INERNCLGTIRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAV 885
Query: 745 WAAVLLKEERYLVTGSMDQELRVWKLNWT 831
A L E LVT S D L++W L T
Sbjct: 886 SYAKFLDNET-LVTASTDNTLKLWDLKKT 913
Score = 35.1 bits (77), Expect = 0.063
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 643 KNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKE-ERYLVTGSMDQELRVWK 819
+N + +S D VK WD+ T H+ W+ + L +GS D +++W
Sbjct: 766 RNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWN 825
Query: 820 LN 825
+N
Sbjct: 826 IN 827
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/84 (25%), Positives = 42/84 (50%)
Frame = +1
Query: 571 ISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWA 750
+SE F GH + +S+ ++ +++SS D V+ WD+ +K C K
Sbjct: 456 LSEKPVCSFVGHLDDVLDLSWSKSQH-LLSSSMDKTVRLWDLSSKTCLKVFSHSDYVTCI 514
Query: 751 AVLLKEERYLVTGSMDQELRVWKL 822
++ Y ++GS+D ++R+W +
Sbjct: 515 QFNPVDDNYFISGSLDAKVRIWSI 538
Score = 45.2 bits (102), Expect = 6e-05
Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +1
Query: 433 VFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKG 612
VF L+ V C F GH + L + H L+S S D V LWD+ S+T FS H
Sbjct: 453 VFGLSEKPV-CSFVGHLDDVLDLSWSKSQH-LLSSSMDKTVRLWDLSSKTCLKVFS-HSD 509
Query: 613 VITSVSFIN-GKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTG 789
+T + F N ++ S D V+ W I H+M V AA + + + G
Sbjct: 510 YVTCIQFNPVDDNYFISGSLDAKVRIWSIPDHQVVDWNDLHEM-VTAACYTPDGQGALVG 568
Query: 790 S 792
S
Sbjct: 569 S 569
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Frame = +1
Query: 259 GISGRYIAVGACEH---VIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNI 429
G + + + +C +++W K G + + A SP G +A F ++
Sbjct: 204 GTADGSVVIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMAAVSPNGRFLAAAAFTADV 263
Query: 430 NVFELTNN------EV--VCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDV 570
V+E+ EV V GHKSA+T L F ++++ SKD + +W++
Sbjct: 264 KVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNI 318
Score = 35.1 bits (77), Expect = 0.063
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Frame = +1
Query: 517 GHRLVSGSKDTEVILWDVI-------SETGKV-RFSGHKGVITSVSFINGKNCIVTSSKD 672
G L + + +V +W+++ E +V + GHK +T + F I+T+SKD
Sbjct: 251 GRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKD 310
Query: 673 TFVKFWDIETKH 708
++ W+I ++
Sbjct: 311 GSIRVWNINVRY 322
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/126 (17%), Positives = 47/126 (37%)
Frame = +1
Query: 460 VCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFIN 639
+ V H S + + + + G I WD K G + +
Sbjct: 148 IVVACHHMSGSSLYMYGEDKQKDQQGKLPLPSIKWDHHHIHEKRSVLTISGATATYGTAD 207
Query: 640 GKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWK 819
G I + S+ T + W +T + +Q++ A + R+L + +++VW+
Sbjct: 208 GSVVIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMAAVSPNGRFLAAAAFTADVKVWE 267
Query: 820 LNWTED 837
+ + +D
Sbjct: 268 IVYQKD 273
Score = 29.5 bits (63), Expect = 3.1
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Frame = +1
Query: 526 LVSGSKDTEVILWDVIS--ETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDI- 696
+ S S+ T+++LW + G V + K + +VS NG+ + ++ VK W+I
Sbjct: 212 IASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMAAVS-PNGR-FLAAAAFTADVKVWEIV 269
Query: 697 -----ETKHCFKT--LGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTEDVKDD 849
K + L GH+ V ++T S D +RVW +N + +D
Sbjct: 270 YQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNINVRYHLDED 327
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 46.8 bits (106), Expect = 2e-05
Identities = 34/154 (22%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Frame = +1
Query: 382 SPTGNHMAVGLFDGNINVFELT---NNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTE 552
SP G VG DG ++++ ++ N + V H+ A+T +++ SG + E
Sbjct: 320 SPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSPDLTMFASGDANRE 379
Query: 553 VILWDVISETGKVRFSG---HKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFK-T 720
++WD ET +V+ + H I S+++ + T S DT V ++++ + T
Sbjct: 380 AVVWD--RETKQVKLNNMLFHTARINSLAWSPNNKMVATGSIDTCVIVYEVDKPASSRIT 437
Query: 721 LGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
+ AV ++ + + D +R+W +
Sbjct: 438 ARNAHLGGVNAVAFIDDCTVASSGEDASVRLWHI 471
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Frame = +1
Query: 391 GNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWD- 567
G V +DG F ++ E H + + C+++ G + ++ S D + +++D
Sbjct: 28 GEDFLVNFYDGPPFKFHSSHRE-------HSNFVNCIRYSPDGTKFITVSSDKKGMIYDG 80
Query: 568 -VISETGKVRFS-GHKGVITSVSFINGKNCIVTSSKDTFVKFWDI 696
+ G++ GHKG I +VS+ ++T S D K W++
Sbjct: 81 KTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAKVWEV 125
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 46.8 bits (106), Expect = 2e-05
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = +1
Query: 409 GLFDGNINVFELTNNEVVCVFA-GHKSAITCLQFDDQGHRLVS-GSKDTEVILWDVISET 582
G FD + V++ + V F K T + H L++ G++D +V L D+ S
Sbjct: 122 GSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDIASGA 181
Query: 583 GKVRFSGHKGVITSVSFINGKNCIV-TSSKDTFVKFWDIETKHCFKTLGGHQMEV 744
SGH+ + SV + ++ T D ++FWDI CF+ L Q ++
Sbjct: 182 FSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVLDQSQTQL 236
Score = 33.1 bits (72), Expect = 0.26
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 8/121 (6%)
Frame = +1
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVIS--------ETGKVRFSGHKGVITSVSF 633
H A+T L+ + G L+S D+ + LWD+ S ETG+++ +KG+ S
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQ--TNKGIQLDTS- 367
Query: 634 INGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRV 813
+ + T VK + + + L GH V ++ L T D+++ V
Sbjct: 368 -DDPALVFVPCMKT-VKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILV 425
Query: 814 W 816
W
Sbjct: 426 W 426
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +1
Query: 592 RFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIET 702
R + H G +T + N ++++ D+ ++ WDIE+
Sbjct: 307 RATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIES 343
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +1
Query: 349 GENVVVTQLAASPTGNHM-AVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHR 525
G+ +++ LA SPT + M AVG + ++ N E++ V G + +T +QF G+
Sbjct: 210 GQAGILSTLAFSPTNSGMLAVGSYGQTTGIYREDNMELLYVLHGQEGGVTHVQFSKDGNY 269
Query: 526 LVSGS-KDTEVILWDV 570
L +G KD ++ WD+
Sbjct: 270 LYTGGRKDPYILCWDI 285
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/94 (24%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +1
Query: 421 GNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVS-GSKDTEVILWDVISETGKVRF 597
G I++F + + + F A T L F Q + +++ G D+ + +++V + K +
Sbjct: 866 GKISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKL 925
Query: 598 SGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIE 699
GH+ +T ++F N N +V+S D+ + W ++
Sbjct: 926 KGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMD 959
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +1
Query: 367 TQLAASPTGNHM-AVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
T LA P N++ A+G+ D +I ++ + +EV GH+ +T L F + + LVS
Sbjct: 890 TSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGA 949
Query: 544 DTEVILWDV 570
D+++ +W +
Sbjct: 950 DSQLCVWSM 958
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Frame = +1
Query: 589 VRFSGHKGVITSVSFI--NGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLL 762
+ H G + ++F N + C+VT +D +K WD T + T GH+ V++
Sbjct: 458 LEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPH 517
Query: 763 KEE--RYLVTGSMDQELRVW 816
++E +++ + ++D +++ W
Sbjct: 518 QKENIQFIFSTAVDGKIKAW 537
Score = 32.3 bits (70), Expect = 0.45
Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 1/119 (0%)
Frame = +1
Query: 481 KSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFI-NGKNCIV 657
+ + C ++S S ++ L+++++ F TS++F N I
Sbjct: 845 EDVVPCFALSKNDSYVMSASGG-KISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIA 903
Query: 658 TSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTE 834
D+ ++ +++ L GHQ V LV+ D +L VW ++ E
Sbjct: 904 IGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWE 962
Score = 31.9 bits (69), Expect = 0.59
Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 7/149 (4%)
Frame = +1
Query: 277 IAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAV--GLFDGNINVFELTN 450
+ G + + +WD G K G V + N + DG I + N
Sbjct: 482 VTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAWLYDN 541
Query: 451 NEVVCVFAGHKSAITCLQFDDQGHRLVS--GSKDTE--VILWDVISETGKVRFSG-HKGV 615
+ + T + + G RL S SK+ E ++ W+ K + G K
Sbjct: 542 MGSRVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGESFIVEWNESEGAVKRTYLGLGKRS 601
Query: 616 ITSVSFINGKNCIVTSSKDTFVKFWDIET 702
+ V F KN + + + VKFWD+++
Sbjct: 602 VGVVQFDTMKNKFLVAGDEFQVKFWDMDS 630
Score = 29.9 bits (64), Expect = 2.4
Identities = 27/138 (19%), Positives = 55/138 (39%), Gaps = 10/138 (7%)
Frame = +1
Query: 307 IWDMK---LGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVV---CV 468
+WD+ + +A + V ++ SP G + V ++++ E +
Sbjct: 400 VWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLE 459
Query: 469 FAGHKSAITCLQFDDQGHRL--VSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFING 642
H + L F +L V+ +D + +WD ++ F GH+ + SV
Sbjct: 460 IDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQK 519
Query: 643 KNC--IVTSSKDTFVKFW 690
+N I +++ D +K W
Sbjct: 520 ENIQFIFSTAVDGKIKAW 537
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/94 (24%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +1
Query: 421 GNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVS-GSKDTEVILWDVISETGKVRF 597
G I++F + + + F A T L F Q + +++ G D+ + +++V + K +
Sbjct: 866 GKISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKL 925
Query: 598 SGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIE 699
GH+ +T ++F N N +V+S D+ + W ++
Sbjct: 926 KGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMD 959
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +1
Query: 367 TQLAASPTGNHM-AVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
T LA P N++ A+G+ D +I ++ + +EV GH+ +T L F + + LVS
Sbjct: 890 TSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGA 949
Query: 544 DTEVILWDV 570
D+++ +W +
Sbjct: 950 DSQLCVWSM 958
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Frame = +1
Query: 589 VRFSGHKGVITSVSFI--NGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLL 762
+ H G + ++F N + C+VT +D +K WD T + T GH+ V++
Sbjct: 458 LEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPH 517
Query: 763 KEE--RYLVTGSMDQELRVW 816
++E +++ + ++D +++ W
Sbjct: 518 QKENIQFIFSTAVDGKIKAW 537
Score = 32.3 bits (70), Expect = 0.45
Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 1/119 (0%)
Frame = +1
Query: 481 KSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFI-NGKNCIV 657
+ + C ++S S ++ L+++++ F TS++F N I
Sbjct: 845 EDVVPCFALSKNDSYVMSASGG-KISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIA 903
Query: 658 TSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTE 834
D+ ++ +++ L GHQ V LV+ D +L VW ++ E
Sbjct: 904 IGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWE 962
Score = 31.9 bits (69), Expect = 0.59
Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 7/149 (4%)
Frame = +1
Query: 277 IAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAV--GLFDGNINVFELTN 450
+ G + + +WD G K G V + N + DG I + N
Sbjct: 482 VTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAWLYDN 541
Query: 451 NEVVCVFAGHKSAITCLQFDDQGHRLVS--GSKDTE--VILWDVISETGKVRFSG-HKGV 615
+ + T + + G RL S SK+ E ++ W+ K + G K
Sbjct: 542 MGSRVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGESFIVEWNESEGAVKRTYLGLGKRS 601
Query: 616 ITSVSFINGKNCIVTSSKDTFVKFWDIET 702
+ V F KN + + + VKFWD+++
Sbjct: 602 VGVVQFDTMKNKFLVAGDEFQVKFWDMDS 630
Score = 29.9 bits (64), Expect = 2.4
Identities = 27/138 (19%), Positives = 55/138 (39%), Gaps = 10/138 (7%)
Frame = +1
Query: 307 IWDMK---LGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVV---CV 468
+WD+ + +A + V ++ SP G + V ++++ E +
Sbjct: 400 VWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLE 459
Query: 469 FAGHKSAITCLQFDDQGHRL--VSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFING 642
H + L F +L V+ +D + +WD ++ F GH+ + SV
Sbjct: 460 IDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQK 519
Query: 643 KNC--IVTSSKDTFVKFW 690
+N I +++ D +K W
Sbjct: 520 ENIQFIFSTAVDGKIKAW 537
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 46.4 bits (105), Expect = 3e-05
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 3/149 (2%)
Frame = +1
Query: 394 NHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGH-RLVSGSKDTEVILWDV 570
N++A +DG + +++ + + H+ + F + VSGS D V LW
Sbjct: 779 NYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWS- 837
Query: 571 ISETGKVRFSGHKGVITSVSFINGKNCIVT-SSKDTFVKFWDIE-TKHCFKTLGGHQMEV 744
I+E + + V F + N ++ S D V +D+ K + TL GH+ V
Sbjct: 838 INEKRSLGTIWSPANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAV 897
Query: 745 WAAVLLKEERYLVTGSMDQELRVWKLNWT 831
+ V + +V+ S D L++W LN T
Sbjct: 898 -SYVKFMDSETIVSASTDNSLKLWNLNKT 925
Score = 35.1 bits (77), Expect = 0.063
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 643 KNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLL-KEERYLVTGSMDQELRVWK 819
KN + ++ D V+ WD T F HQ W+ + V+GS D +++W
Sbjct: 778 KNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWS 837
Query: 820 LN 825
+N
Sbjct: 838 IN 839
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHR-LVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNC 651
GH+ ++C+ + + + S S D ++ LWD+ S +F GH+G + ++ N
Sbjct: 54 GHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNV 113
Query: 652 IVTSSKDTFVKFWDI 696
+V+ D V+ W++
Sbjct: 114 LVSCGTDCTVRLWNV 128
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +1
Query: 418 DGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDV 570
DG+I ++++++ VC F GH+ A+ L G+ LVS D V LW+V
Sbjct: 78 DGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNV 128
Score = 35.5 bits (78), Expect = 0.048
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +1
Query: 319 KLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHK-SAIT 495
KL E V V + SPTG G +D ++ +F ++ + +
Sbjct: 267 KLDEAKCVHKDHVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVF 326
Query: 496 CLQFDDQGHRLVSGSKDTEVILW 564
C+++ ++SGS DT + LW
Sbjct: 327 CVKYSCDATYVISGSDDTNLRLW 349
Score = 31.9 bits (69), Expect = 0.59
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +1
Query: 601 GHK-GVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERY 777
GH+ GV N I ++S D ++ WDI ++ GHQ V +
Sbjct: 54 GHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNV 113
Query: 778 LVTGSMDQELRVWKL 822
LV+ D +R+W +
Sbjct: 114 LVSCGTDCTVRLWNV 128
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 45.6 bits (103), Expect = 4e-05
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
Frame = +1
Query: 361 VVTQLAASPTGNHMA-VGLFDGNINVFELTNN------EVVCVFAGHKSAITCLQFDDQG 519
VV Q+ A N M G G+I V++ T + + + GH +TC F G
Sbjct: 211 VVGQVNAMTIANGMLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTC--FAVGG 268
Query: 520 HRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIE 699
L SGS D + +WD+ + + H G +TS+ + C+++SS D +K W
Sbjct: 269 QMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSL--LCWDKCLISSSLDGTIKVWAYS 326
Query: 700 TKHCFKTLGGHQME 741
K + + E
Sbjct: 327 ENGILKVVQTRRQE 340
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 45.2 bits (102), Expect = 6e-05
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Frame = +1
Query: 517 GHRLVSGSKDTEVILWDVISETGKV--RFSGHKGVITSVSFINGKNCIVTSSKDTFVKFW 690
G L+S SKD+ +L + ETG F GHKG + S N ++S D K W
Sbjct: 31 GFFLISASKDSHPMLRN--GETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLW 88
Query: 691 DIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
D T + H+ V A ++ + L+TG ++ LRV+ +N
Sbjct: 89 DALTGDVLHSF-EHKHIVRACAFSEDTKSLLTGGFEKILRVFDMN 132
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +1
Query: 469 FAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFS-GHKGVITSVSFINGK 645
F GHK A+ D+ R S S D LWD + TG V S HK ++ + +F
Sbjct: 57 FEGHKGAVWSSCLDNNALRAASASADFSAKLWDAL--TGDVLHSFEHKHIVRACAFSEDT 114
Query: 646 NCIVTSSKDTFVKFWDI 696
++T + ++ +D+
Sbjct: 115 KSLLTGGFEKILRVFDM 131
Score = 37.5 bits (83), Expect = 0.012
Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 2/128 (1%)
Frame = +1
Query: 268 GRYIAVGACEHVIIWDMK-LG-EKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFE 441
GRYI V WD G K+ +P N+ L +G G D + VF+
Sbjct: 199 GRYITTADGSTVKFWDANHFGLVKSYDMPC-NIESASLEPK-SGEKFVAGGEDMWVRVFD 256
Query: 442 LTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT 621
E + GH + C++F G SGS+D + +W + + + V
Sbjct: 257 FYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTTPANPEENETSSRRVKH 316
Query: 622 SVSFINGK 645
SV ++ K
Sbjct: 317 SVDEVSKK 324
Score = 29.1 bits (62), Expect = 4.2
Identities = 34/158 (21%), Positives = 64/158 (40%), Gaps = 5/158 (3%)
Frame = +1
Query: 421 GNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFS 600
G + ++++ + ++V KS +T + G R ++ + + V WD + G V+
Sbjct: 168 GGVRLWDVRSGKIVQTLET-KSPVTSAEVSQDG-RYITTADGSTVKFWDA-NHFGLVKSY 224
Query: 601 GHKGVITSVSFI--NGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEER 774
I S S +G+ V +D +V+ +D T GH V
Sbjct: 225 DMPCNIESASLEPKSGEK-FVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGL 283
Query: 775 YLVTGSMDQELRVWK---LNWTEDVKDDDXLKHQLEIV 879
+GS D +R+W+ N E+ +KH ++ V
Sbjct: 284 SYASGSEDGTIRIWQTTPANPEENETSSRRVKHSVDEV 321
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +1
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWT 831
++++SKD+ + ET T GH+ VW++ L + S D ++W T
Sbjct: 34 LISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWDA-LT 92
Query: 832 EDVKDDDXLKH 864
DV KH
Sbjct: 93 GDVLHSFEHKH 103
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 45.2 bits (102), Expect = 6e-05
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Frame = +1
Query: 517 GHRLVSGSKDTEVILWDVISETGKV--RFSGHKGVITSVSFINGKNCIVTSSKDTFVKFW 690
G L+S SKD+ +L + ETG F GHKG + S N ++S D K W
Sbjct: 31 GFFLISASKDSHPMLRN--GETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLW 88
Query: 691 DIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
D T + H+ V A ++ + L+TG ++ LRV+ +N
Sbjct: 89 DALTGDVLHSF-EHKHIVRACAFSEDTKSLLTGGFEKILRVFDMN 132
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +1
Query: 469 FAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFS-GHKGVITSVSFINGK 645
F GHK A+ D+ R S S D LWD + TG V S HK ++ + +F
Sbjct: 57 FEGHKGAVWSSCLDNNALRAASASADFSAKLWDAL--TGDVLHSFEHKHIVRACAFSEDT 114
Query: 646 NCIVTSSKDTFVKFWDI 696
++T + ++ +D+
Sbjct: 115 KSLLTGGFEKILRVFDM 131
Score = 37.5 bits (83), Expect = 0.012
Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 2/128 (1%)
Frame = +1
Query: 268 GRYIAVGACEHVIIWDMK-LG-EKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFE 441
GRYI V WD G K+ +P N+ L +G G D + VF+
Sbjct: 199 GRYITTADGSTVKFWDANHFGLVKSYDMPC-NIESASLEPK-SGEKFVAGGEDMWVRVFD 256
Query: 442 LTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT 621
E + GH + C++F G SGS+D + +W + + + V
Sbjct: 257 FYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTTPANPEENETSSRRVKH 316
Query: 622 SVSFINGK 645
SV ++ K
Sbjct: 317 SVDEVSKK 324
Score = 29.1 bits (62), Expect = 4.2
Identities = 34/158 (21%), Positives = 64/158 (40%), Gaps = 5/158 (3%)
Frame = +1
Query: 421 GNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFS 600
G + ++++ + ++V KS +T + G R ++ + + V WD + G V+
Sbjct: 168 GGVRLWDVRSGKIVQTLET-KSPVTSAEVSQDG-RYITTADGSTVKFWDA-NHFGLVKSY 224
Query: 601 GHKGVITSVSFI--NGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEER 774
I S S +G+ V +D +V+ +D T GH V
Sbjct: 225 DMPCNIESASLEPKSGEK-FVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGL 283
Query: 775 YLVTGSMDQELRVWK---LNWTEDVKDDDXLKHQLEIV 879
+GS D +R+W+ N E+ +KH ++ V
Sbjct: 284 SYASGSEDGTIRIWQTTPANPEENETSSRRVKHSVDEV 321
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +1
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWT 831
++++SKD+ + ET T GH+ VW++ L + S D ++W T
Sbjct: 34 LISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWDA-LT 92
Query: 832 EDVKDDDXLKH 864
DV KH
Sbjct: 93 GDVLHSFEHKH 103
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +1
Query: 481 KSAITCLQFDDQGHRLVS-GSKDTEVILWDVISETGK-VRFSGHKGVITSVSFINGKNCI 654
+SA+ C++FD G V+ G D + ++D+ + GH ++ V F++G +
Sbjct: 69 RSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVSYVRFLDG-GTV 127
Query: 655 VTSSKDTFVKFWDIETKHCFKTLGGH 732
VT+ D +K W +E +T GH
Sbjct: 128 VTAGTDGCLKLWSVEDGRVIRTYEGH 153
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 44.8 bits (101), Expect = 8e-05
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 7/143 (4%)
Frame = +1
Query: 157 SSMGLTKQYLRYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVIIWDMKLGEK- 333
SS T + R A + I + D ++ + ++G A V +W +L K
Sbjct: 253 SSWDTTIKVWRIADSKCLESIHAHD-DAINSVMSGFDDLVFTGSADGTVKVWKRELQGKG 311
Query: 334 -----AQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVC-VFAGHKSAIT 495
AQVL + VT LA + + G DG +N +E + + GHKSA+
Sbjct: 312 TKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWERSKRSFTGGILKGHKSAVL 371
Query: 496 CLQFDDQGHRLVSGSKDTEVILW 564
CL G+ L+SGS D + +W
Sbjct: 372 CLGI--AGNLLLSGSADKNICVW 392
Score = 32.3 bits (70), Expect = 0.45
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 12/134 (8%)
Frame = +1
Query: 409 GLFDGNINVF--EL----TNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWD- 567
G DG + V+ EL T + + V ++A+T L Q + GS D V W+
Sbjct: 294 GSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWER 353
Query: 568 -VISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFW----DIETKHCFKTLGGH 732
S TG + GHK + + N +++ S D + W ++ C L GH
Sbjct: 354 SKRSFTGGI-LKGHKSAVLCLGIAG--NLLLSGSADKNICVWRRDPSDKSHQCLSVLTGH 410
Query: 733 QMEVWAAVLLKEER 774
V + ++EER
Sbjct: 411 MGPV-KCLAVEEER 423
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 44.8 bits (101), Expect = 8e-05
Identities = 20/84 (23%), Positives = 43/84 (51%)
Frame = +1
Query: 571 ISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWA 750
+SE F GH + +++ ++ +++SS D V+ W++ ++ C K
Sbjct: 501 LSEKPFCSFQGHVDDVLDLAWSKSQH-LLSSSMDKTVRLWNLSSQTCLKVFSHSDYVTCI 559
Query: 751 AVLLKEERYLVTGSMDQELRVWKL 822
++RY ++GS+D ++RVW +
Sbjct: 560 QFNPVDDRYFISGSLDAKVRVWSI 583
Score = 28.7 bits (61), Expect = 5.5
Identities = 33/164 (20%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Frame = +1
Query: 364 VTQLAASPTGNHMAV-GLFDGNINVFELTNNEVVCVFAGHKSAIT-CLQFDDQGHRLVS- 534
VT + +P + + G D + V+ + + +VV + H+ + C D QG + S
Sbjct: 556 VTCIQFNPVDDRYFISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSACYTPDGQGVLVGSY 615
Query: 535 -------GSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNC-IVTSSKDTFVKFW 690
+ D ++ I+ K + H+ IT F+ G + ++ +S D+ ++
Sbjct: 616 KGSCRMYSASDNKLQQKSQINLQNKKK-KAHQKKITGFQFVPGSSSEVLVTSSDSRIRVV 674
Query: 691 D-IETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWK 819
D + + K ++ A++ + +Y+V+ S D + +WK
Sbjct: 675 DGTDLVNKLKGFRNTSSQISASITA-DGKYVVSASEDSHVYIWK 717
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 44.8 bits (101), Expect = 8e-05
Identities = 35/153 (22%), Positives = 72/153 (47%), Gaps = 8/153 (5%)
Frame = +1
Query: 265 SGRYIAVGACEHVIIWDMKLGEKAQVLPGENVV-VTQLAASPT-GNHMAVGLFDGNINVF 438
SG A G V +WD++ + + +P E+ VT L+AS G +A G DG++ ++
Sbjct: 1139 SGYLYASGETSTVTLWDLEKEQLVRSVPSESECGVTALSASQVHGGQLAAGFADGSLRLY 1198
Query: 439 ELTNNE-VVCVFAGHKSA--ITCLQFDD--QGHRLVSGSKDTEVILWDV-ISETGKVRFS 600
++ + E +VC H+ + L F ++VS S+ ++ D+ + +
Sbjct: 1199 DVRSPEPLVCATRPHQKVERVVGLSFQPGLDPAKVVSASQAGDIQFLDLRTTRDTYLTID 1258
Query: 601 GHKGVITSVSFINGKNCIVTSSKDTFVKFWDIE 699
H+G +T+++ I + S +K + ++
Sbjct: 1259 AHRGSLTALAVHRHAPIIASGSAKQLIKVFSLQ 1291
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 44.4 bits (100), Expect = 1e-04
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 4/141 (2%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISE--TGKVRFSGHKGVITSVSFINGKN 648
GH+ +T + +L + SKD V +WD S TG + G G I S G
Sbjct: 142 GHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVGCIIS----EGPW 197
Query: 649 CIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNW 828
+V VK W+I+ + +L G +V++ V+ + L G+ D + VW+ N
Sbjct: 198 LLV--GMPNLVKAWNIQ-NNADLSLNGPVGQVYSLVVGTD--LLFAGTQDGSILVWRYNS 252
Query: 829 TEDVKDD--DXLKHQLEIVKL 885
T D L H L +V L
Sbjct: 253 TTSCFDPAASLLGHTLAVVSL 273
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 592 RFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHC--FKTLGGHQMEVWAAVLLK 765
+ GH+ V+T ++ +G + + T+SKD V+ WD + C LGG ++
Sbjct: 139 QLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGE-----VGCIIS 193
Query: 766 EERYLVTGSMDQELRVWKLNWTEDV 840
E +L+ G M ++ W + D+
Sbjct: 194 EGPWLLVG-MPNLVKAWNIQNNADL 217
Score = 31.1 bits (67), Expect = 1.0
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 4/165 (2%)
Frame = +1
Query: 343 LPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGH 522
L G VVT +A + + D + +++ + + V + C+ +G
Sbjct: 140 LDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVL-NLGGEVGCII--SEGP 196
Query: 523 RLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIE- 699
L+ G + V W+ I + +G G + S+ + G + + ++D + W
Sbjct: 197 WLLVGMPNL-VKAWN-IQNNADLSLNGPVGQVYSL--VVGTDLLFAGTQDGSILVWRYNS 252
Query: 700 TKHCFK---TLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
T CF +L GH + V ++ + R L +G+MD ++VW L+
Sbjct: 253 TTSCFDPAASLLGHTLAV-VSLYVGANR-LYSGAMDNSIKVWSLD 295
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Frame = +1
Query: 565 DVISETGKVRFSGHKGVITSVSFINGK-NCIVTSSKDTFVKFWDIETKHC---FKTLGGH 732
DV SET GH + + K ++T+SKD V+ W++ET C F GGH
Sbjct: 114 DVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGICILIFAGAGGH 173
Query: 733 QMEVWAAVLLKEERY-LVTGSMDQELRVWKLN--WT 831
+ EV + + Y + MD +++W + WT
Sbjct: 174 RYEVLSVDFHPSDIYRFASCGMDTTIKIWSMKEFWT 209
Score = 33.9 bits (74), Expect = 0.15
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Frame = +1
Query: 352 ENVVVTQLAASPTGN-HMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRL 528
E+ A GN ++A G G I V ++ + + GH ++ ++ +L
Sbjct: 84 ESFYTVSWACGVNGNPYVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQL 143
Query: 529 V-SGSKDTEVILWDVISETGKVRFS---GHKGVITSVSF-INGKNCIVTSSKDTFVKFWD 693
V + SKD V LW+V + + F+ GH+ + SV F + + DT +K W
Sbjct: 144 VITASKDESVRLWNVETGICILIFAGAGGHRYEVLSVDFHPSDIYRFASCGMDTTIKIWS 203
Query: 694 IE 699
++
Sbjct: 204 MK 205
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Frame = +1
Query: 373 LAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQF----------DDQGH 522
LA S G ++A G GN+++++L +E C H++ I L F ++
Sbjct: 391 LAVSEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFSFPVLTNVDSENASS 450
Query: 523 RLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIET 702
L SG K + ++DV V +TSV F ++TS D ++ +D+
Sbjct: 451 LLASGGKGRAIHIYDVKRNFDPVGSVCGSAAVTSVKFACNGRKMLTSGADR-LQMFDVNR 509
Query: 703 K 705
K
Sbjct: 510 K 510
Score = 31.5 bits (68), Expect = 0.78
Identities = 21/108 (19%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +1
Query: 247 VTLNGISGRYIAVGACEHVIIWDMKLGEKAQVLPGE--NVVVTQLAASPTGNHMAVGLFD 420
V ++ SG + VG + + I+D++ G+ + + + ++ P+ N++ +
Sbjct: 532 VAVDPTSGLVVTVGQDKKINIFDIESGKLVRSFKQDRDHGDPVKVILDPSCNYLVCSYSN 591
Query: 421 GNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILW 564
I + E+V GH A+T + F ++S + D + +W
Sbjct: 592 RTICFVDFVTGELVAQATGHGEAVTGVIFLPDCKHIISVASDGCIFVW 639
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/114 (19%), Positives = 47/114 (41%), Gaps = 3/114 (2%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFA---GHKSAITCLQFDDQGHRLVS 534
+ +A PT + D IN+F++ + ++V F H + + D + LV
Sbjct: 529 IYDVAVDPTSGLVVTVGQDKKINIFDIESGKLVRSFKQDRDHGDPVKVI-LDPSCNYLVC 587
Query: 535 GSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDI 696
+ + D ++ + +GH +T V F+ I++ + D + W +
Sbjct: 588 SYSNRTICFVDFVTGELVAQATGHGEAVTGVIFLPDCKHIISVASDGCIFVWKL 641
Score = 28.3 bits (60), Expect = 7.3
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +1
Query: 526 LVSGSKDTEVILWDVISETGKV--RFSGHKGVITSVSFINGKNC--IVTSSKDTFVKFWD 693
+V+ +D ++ ++D+ E+GK+ F + V I +C +V S + + F D
Sbjct: 541 VVTVGQDKKINIFDI--ESGKLVRSFKQDRDHGDPVKVILDPSCNYLVCSYSNRTICFVD 598
Query: 694 IETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
T GH V + L + +++++ + D + VWKL
Sbjct: 599 FVTGELVAQATGHGEAVTGVIFLPDCKHIISVASDGCIFVWKL 641
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 43.6 bits (98), Expect = 2e-04
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Frame = +1
Query: 403 AVGLFDGNINVFELTNNEVV--CVFAGHKSAITCLQFDDQGHRLVS-GSKDTEVILWDVI 573
A G DG + +++ N + V G +AI ++FD G ++ G D ++D+
Sbjct: 184 ASGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGCADRNAYVYDIR 243
Query: 574 SETGK-VRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIET-KHCFKTLGGH--QME 741
+ GH +T F++ + IVT S D +K WDI+ + +T GH
Sbjct: 244 RLVDPLIVLDGHTKTVTYARFMDS-HTIVTGSTDGSLKQWDIDNGRRVVRTYRGHVNSRN 302
Query: 742 VWAAVLLKEERYLVTGSMDQELRVWKLNWTEDV 840
+ + +V+GS + ++ V+ W E V
Sbjct: 303 FVGLSVWRHGGLVVSGSENNQVFVYDKRWEEPV 335
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 43.6 bits (98), Expect = 2e-04
Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Frame = +1
Query: 391 GNHMAVGLFDGNINVFELTN-NEVV-CVFAGHKSAITC--LQFDDQGHRLV-SGSKDTEV 555
GN +A+G + +I +++L NEV+ CV G + T L F+ + +V SGS+D +V
Sbjct: 180 GNFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQTLFFLTFNWENRNIVASGSEDKKV 239
Query: 556 ILWDVISETGKVRFSGHKGVITSVSFIN-GKNCIVTSSKDTFVKFWD 693
+WDV + KV H+ + +V++ N +++ S+D V D
Sbjct: 240 KVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKD 286
Score = 40.7 bits (91), Expect = 0.001
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 13/202 (6%)
Frame = +1
Query: 259 GISGRYIAVGACEHVI-IWDMKLGEKAQVLPGENV--VVTQLAASPTGNH-----MAVGL 414
G G ++A+G E I IWD+ L +VLP + + Q T N +A G
Sbjct: 177 GGKGNFVAIGTMESSIEIWDLDLVN--EVLPCVQLGRIAGQTLFFLTFNWENRNIVASGS 234
Query: 415 FDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHR-LVSGSKDTEVILWDVISETGK- 588
D + V+++ + H+ + + +++ L+SGS+D V+L D +
Sbjct: 235 EDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRDPSNSG 294
Query: 589 VRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKT--LGGHQMEVWA-AVL 759
+++S V + ++ V S KD VK +D + + H EV + +
Sbjct: 295 LKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHAHDSEVSSISYN 354
Query: 760 LKEERYLVTGSMDQELRVWKLN 825
+ L TGS D+ +++W L+
Sbjct: 355 IHAPNLLATGSADESVKLWDLS 376
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
Frame = +1
Query: 523 RLVSGSKDTEVILWDVISETGK------------VRFSGHKGVITSVSFINGKNCIVTSS 666
R+ SG+ E+I+W + G +R +GH+G I + + + IV+ S
Sbjct: 195 RIASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVS 254
Query: 667 KDTFVKFWDIETKHCF-KTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTE 834
D + W+I+++ L GH + VW + + +VT D RVW ++ T+
Sbjct: 255 DDRSARIWEIDSQEVVGPVLFGHSVRVWDCCI--SDSLIVTAGEDCTCRVWGVDGTQ 309
Score = 39.1 bits (87), Expect = 0.004
Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 7/166 (4%)
Frame = +1
Query: 349 GENVVVTQLAASPTGNHM----AVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQ 516
G+++ ++A+ N + AVGL N++ + + ++ + GH+ +I + +
Sbjct: 188 GDSISTLRIASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRL-TGHEGSIFRIVWSLD 246
Query: 517 GHRLVSGSKDTEVILWDVISE--TGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFW 690
G ++VS S D +W++ S+ G V F GH + + IVT+ +D + W
Sbjct: 247 GSKIVSVSDDRSARIWEIDSQEVVGPVLF-GHSVRVWDCCI--SDSLIVTAGEDCTCRVW 303
Query: 691 DIETKHCFKTLGGH-QMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
++ + + H +W + LVT D ++V +L+
Sbjct: 304 GVDGTQ-LEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAIKVHQLH 348
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
Frame = +1
Query: 523 RLVSGSKDTEVILWDVISETGK------------VRFSGHKGVITSVSFINGKNCIVTSS 666
R+ SG+ E+I+W + G +R +GH+G I + + + IV+ S
Sbjct: 195 RIASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVS 254
Query: 667 KDTFVKFWDIETKHCF-KTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTE 834
D + W+I+++ L GH + VW + + +VT D RVW ++ T+
Sbjct: 255 DDRSARIWEIDSQEVVGPVLFGHSVRVWDCCI--SDSLIVTAGEDCTCRVWGVDGTQ 309
Score = 39.1 bits (87), Expect = 0.004
Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 7/166 (4%)
Frame = +1
Query: 349 GENVVVTQLAASPTGNHM----AVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQ 516
G+++ ++A+ N + AVGL N++ + + ++ + GH+ +I + +
Sbjct: 188 GDSISTLRIASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRL-TGHEGSIFRIVWSLD 246
Query: 517 GHRLVSGSKDTEVILWDVISE--TGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFW 690
G ++VS S D +W++ S+ G V F GH + + IVT+ +D + W
Sbjct: 247 GSKIVSVSDDRSARIWEIDSQEVVGPVLF-GHSVRVWDCCI--SDSLIVTAGEDCTCRVW 303
Query: 691 DIETKHCFKTLGGH-QMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
++ + + H +W + LVT D ++V +L+
Sbjct: 304 GVDGTQ-LEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAIKVHQLH 348
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/90 (23%), Positives = 41/90 (45%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
+ +A S G H+A DG + +F+ ++VC + A+ C + G +++G +
Sbjct: 306 INSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGE 365
Query: 544 DTEVILWDVISETGKVRFSGHKGVITSVSF 633
D V +W + GH ++ V+F
Sbjct: 366 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/72 (20%), Positives = 34/72 (47%)
Frame = +1
Query: 607 KGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVT 786
+G I S++F N + T +D +++ +D T+ + + + +Y++T
Sbjct: 303 QGSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILT 362
Query: 787 GSMDQELRVWKL 822
G D ++VW +
Sbjct: 363 GGEDDLVQVWSM 374
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/84 (19%), Positives = 36/84 (42%)
Frame = +1
Query: 481 KSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVT 660
+ +I + F + G L + +D + ++D +++ + G + S+ I+T
Sbjct: 303 QGSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILT 362
Query: 661 SSKDTFVKFWDIETKHCFKTLGGH 732
+D V+ W +E + GH
Sbjct: 363 GGEDDLVQVWSMEDRKVVAWGEGH 386
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 43.6 bits (98), Expect = 2e-04
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Frame = +1
Query: 517 GHRLVSGSKDTEVILWDVISETGKV--RFSGHKGVITSVSFINGKNCIVTSSKDTFVKFW 690
G L+S SKD+ +L + ETG F GHKG + S S ++S D K W
Sbjct: 26 GFFLISASKDSNPMLRN--GETGDWIGTFEGHKGAVWSCSLDKNAIRAASASADFTAKIW 83
Query: 691 DIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
+ T + H+ V A ++ L+TG M++ LR++ LN
Sbjct: 84 NALTGDELHSFE-HKHIVRACAFSEDTHRLLTGGMEKILRIFDLN 127
Score = 39.5 bits (88), Expect = 0.003
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 4/117 (3%)
Frame = +1
Query: 268 GRYIAVGACEHVIIWDMK-LGE-KAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFE 441
GRYI V WD K G K+ +P NV L GN G D ++ F+
Sbjct: 194 GRYITTADGSSVKFWDAKNFGLLKSYDMPC-NVESASLEPKH-GNTFIAGGEDMWVHRFD 251
Query: 442 LTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDV--ISETGKVRFSGH 606
E + GH + C+++ G SGS+D V +W V ++ + SGH
Sbjct: 252 FQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVNHPEESNLSGH 308
Score = 38.7 bits (86), Expect = 0.005
Identities = 29/157 (18%), Positives = 61/157 (38%), Gaps = 2/157 (1%)
Frame = +1
Query: 358 VVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSG 537
V V +P G + D N + + + F GHK A+ D R S
Sbjct: 15 VDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNAIRAASA 74
Query: 538 SKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHC-F 714
S D +W+ ++ F HK ++ + +F + ++T + ++ +D+
Sbjct: 75 SADFTAKIWNALTGDELHSFE-HKHIVRACAFSEDTHRLLTGGMEKILRIFDLNRPDAPP 133
Query: 715 KTLGGHQMEVWAAVLLKEERYLVTGSMDQ-ELRVWKL 822
K +G + L + +++ D ++R+W +
Sbjct: 134 KEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDI 170
Score = 28.7 bits (61), Expect = 5.5
Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
Frame = +1
Query: 421 GNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFS 600
G+I ++++ ++++V KS +T + G R ++ + + V WD G ++
Sbjct: 163 GDIRLWDIRSDKIVHTLET-KSPVTSAEVSQDG-RYITTADGSSVKFWDA-KNFGLLKSY 219
Query: 601 GHKGVITSVSFI-NGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERY 777
+ S S N + +D +V +D +T GH V
Sbjct: 220 DMPCNVESASLEPKHGNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGES 279
Query: 778 LVTGSMDQELRVW 816
+GS D +R+W
Sbjct: 280 YTSGSEDGTVRIW 292
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/116 (21%), Positives = 51/116 (43%)
Frame = +1
Query: 355 NVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVS 534
N V ++A + G+ + G + V + + + H + C+ D +G
Sbjct: 149 NYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPSLKPLDTLTAHTAGCYCIAIDPKGRYFAV 208
Query: 535 GSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIET 702
GS D+ V LWD+ F+ + + ++SF I ++S+D F+ +++T
Sbjct: 209 GSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASASEDLFIDIANVQT 264
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 7/122 (5%)
Frame = +1
Query: 469 FAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDV----ISETGKVRFSGHKGVITSVSF- 633
+ GHK + + ++ G +L SGS D +W++ S+ + GH + + +
Sbjct: 16 YQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWD 75
Query: 634 INGKNCIVTSSKDTFVKFWDIETKHCFK--TLGGHQMEVWAAVLLKEERYLVTGSMDQEL 807
+ + T+S D V+ WD + C + L G + + + ++ G+ D EL
Sbjct: 76 PKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINI---TYKPDGTHVAVGNRDDEL 132
Query: 808 RV 813
+
Sbjct: 133 TI 134
Score = 31.5 bits (68), Expect = 0.78
Identities = 34/169 (20%), Positives = 61/169 (36%), Gaps = 3/169 (1%)
Frame = +1
Query: 301 VIIWDMKLGEKAQV--LPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFA 474
V +WD + G+ Q L GEN+ +T P G H+AVG D + + ++ + +
Sbjct: 91 VRLWDARSGKCTQQVELSGENINITY---KPDGTHVAVGNRDDELTILDVRKFKPLHRRK 147
Query: 475 -GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNC 651
++ L +G EV+ + + + + H ++
Sbjct: 148 FNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPSLKPLDTL--TAHTAGCYCIAIDPKGRY 205
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMD 798
S D+ V WDI C +T + V Y+ + S D
Sbjct: 206 FAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASASED 254
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCI 654
GH+ +T L+++ +G L S +KD LW + + GH G + + +
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 655 VTSSKDTFVKFWDIET 702
+T S D K WD+++
Sbjct: 68 ITGSADQTAKLWDVKS 83
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +1
Query: 589 VRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKE 768
+ GH+ +T + + + + + +KD W + T GH VW + ++
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRD 63
Query: 769 ERYLVTGSMDQELRVW 816
L+TGS DQ ++W
Sbjct: 64 SSRLITGSADQTAKLW 79
Score = 39.1 bits (87), Expect = 0.004
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 448 NNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT-S 624
N E + + GH A+ C RL++GS D LWDV ++GK F+ T S
Sbjct: 41 NGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDV--KSGKELFTFKFNAPTRS 98
Query: 625 VSFINGKNCIVTSSKDTFV 681
V F G V ++ D FV
Sbjct: 99 VDFAVGDRLAVITT-DHFV 116
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +1
Query: 526 LVSGSKDTEVILWDVISETGKVRFS-----GHKGVITSVSFINGKNCIVTSSKDTFVKFW 690
+VSG +D + +WD +ETGK+ GHK ITS+ + +T S D K W
Sbjct: 163 IVSGGEDKVIRIWD--AETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 691 DIETKHCFKT 720
D+ T KT
Sbjct: 221 DMRTLTLLKT 230
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLG---GHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
IV+ +D ++ WD ET K GH+ ++ + ++ + +TGS+D+ ++W +
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCI 654
GH+ +T L+++ +G L S +KD LW + + GH G + + +
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 655 VTSSKDTFVKFWDIET 702
+T S D K WD+++
Sbjct: 68 ITGSADQTAKLWDVKS 83
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +1
Query: 589 VRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKE 768
+ GH+ +T + + + + + +KD W + T GH VW + ++
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRD 63
Query: 769 ERYLVTGSMDQELRVW 816
L+TGS DQ ++W
Sbjct: 64 SSRLITGSADQTAKLW 79
Score = 39.1 bits (87), Expect = 0.004
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 448 NNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT-S 624
N E + + GH A+ C RL++GS D LWDV ++GK F+ T S
Sbjct: 41 NGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDV--KSGKELFTFKFNAPTRS 98
Query: 625 VSFINGKNCIVTSSKDTFV 681
V F G V ++ D FV
Sbjct: 99 VDFAVGDRLAVITT-DHFV 116
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +1
Query: 526 LVSGSKDTEVILWDVISETGKVRFS-----GHKGVITSVSFINGKNCIVTSSKDTFVKFW 690
+VSG +D + +WD +ETGK+ GHK ITS+ + +T S D K W
Sbjct: 163 IVSGGEDKVIRIWD--AETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 691 DIETKHCFKT 720
D+ T KT
Sbjct: 221 DMRTLTLLKT 230
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLG---GHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
IV+ +D ++ WD ET K GH+ ++ + ++ + +TGS+D+ ++W +
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCI 654
GH+ +T L+++ +G L S +KD LW + + GH G + + +
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 655 VTSSKDTFVKFWDIET 702
+T S D K WD+++
Sbjct: 68 ITGSADQTAKLWDVKS 83
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +1
Query: 589 VRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKE 768
+ GH+ +T + + + + + +KD W + T GH VW + ++
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRD 63
Query: 769 ERYLVTGSMDQELRVW 816
L+TGS DQ ++W
Sbjct: 64 SSRLITGSADQTAKLW 79
Score = 39.1 bits (87), Expect = 0.004
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 448 NNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVIT-S 624
N E + + GH A+ C RL++GS D LWDV ++GK F+ T S
Sbjct: 41 NGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDV--KSGKELFTFKFNAPTRS 98
Query: 625 VSFINGKNCIVTSSKDTFV 681
V F G V ++ D FV
Sbjct: 99 VDFAVGDRLAVITT-DHFV 116
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +1
Query: 526 LVSGSKDTEVILWDVISETGKVRFS-----GHKGVITSVSFINGKNCIVTSSKDTFVKFW 690
+VSG +D + +WD +ETGK+ GHK ITS+ + +T S D K W
Sbjct: 163 IVSGGEDKVIRIWD--AETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 691 DIETKHCFKT 720
D+ T KT
Sbjct: 221 DMRTLTLLKT 230
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLG---GHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
IV+ +D ++ WD ET K GH+ ++ + ++ + +TGS+D+ ++W +
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
+ +A S G ++A DG + +F+ + ++VC + A+ C + G L++G +
Sbjct: 306 INSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGE 365
Query: 544 DTEVILWDVISETGKVRFSGHKGVITSVSF 633
D V +W + GH ++ V+F
Sbjct: 366 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
Score = 35.9 bits (79), Expect = 0.036
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = +1
Query: 607 KGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVT 786
+G I S++F N + T +D +++ +D T+ + + + + +YL+T
Sbjct: 303 QGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLT 362
Query: 787 GSMDQELRVWKL 822
G D ++VW +
Sbjct: 363 GGEDDLVQVWSM 374
Score = 28.7 bits (61), Expect = 5.5
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
Frame = +1
Query: 268 GRYIA-VGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFEL 444
G Y+A VG ++ I+D + + + A S G ++ G D + V+ +
Sbjct: 315 GAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWSM 374
Query: 445 TNNEVVCVFAGHKSAITCLQFD-------DQG------HRLVSGSKDTEVILWDV 570
+ +VV GH S ++ + FD +G +R S +DT+++LWD+
Sbjct: 375 EDRKVVAWGEGHNSWVSGVAFDSYWSSPNSEGSGENVMYRFGSVGQDTQLLLWDL 429
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +1
Query: 571 ISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWA 750
I E F GH G + +S+ + N ++++S D V+ W + + C +
Sbjct: 316 IMEKPLYEFRGHTGEVLDISW-SKDNYLLSASMDKTVRLWKVGSNDCLGVFAHNSYVTSV 374
Query: 751 AVLLKEERYLVTGSMDQELRVWKLN 825
E Y ++GS+D ++R+W ++
Sbjct: 375 QFNPVNENYFMSGSIDGKVRIWNIS 399
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Frame = +1
Query: 337 QVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVC-----VFAGHKSAITCL 501
++ P ++ L+ SP + + +D + +E+T ++ V H + C
Sbjct: 20 EITPPATDSISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCS 79
Query: 502 QFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFV 681
+ D G + +G D + +W ++S + H +++I G N +VT S D +
Sbjct: 80 AWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMNLLVTGSWDKTL 139
Query: 682 K 684
K
Sbjct: 140 K 140
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 42.3 bits (95), Expect = 4e-04
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Frame = +1
Query: 514 QGHRLVSGSKDTEVILWDVISETGKVR-------FSGHKGVITSVSF-INGKNCIVTSSK 669
QGH L+SGS D ++ LWD I+ T K + F H+GV+ V++ + + +
Sbjct: 191 QGH-LLSGSDDAQICLWD-INATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGD 248
Query: 670 DTFVKFWDIETKHCFK---TLGGHQMEVWAAVLLKEERYLV-TGSMDQELRVWKL 822
D ++ WD+ + K ++ H MEV ++V TGS D+ ++++ L
Sbjct: 249 DQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDL 303
>At1g08190.1 68414.m00905 vacuolar assembly protein, putative
(VPS41) 99.8% identical to Vacuolar assembly protein
VPS41 homolog (SP:P93043) [Arabidopsis thaliana];
similar to vacuolar assembly protein vps41 GI:1835787
from [Lycopersicon esculentum]
Length = 980
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/70 (27%), Positives = 38/70 (54%)
Frame = +1
Query: 400 MAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISE 579
+A+G DG + + +L N+V F H + + + FD +G + S S D V++ + ++
Sbjct: 72 IALGTHDGTVRILDLLGNQVK-EFRAHTAPVNDINFDTEGEYIGSCSDDGSVVINSLFTD 130
Query: 580 TGKVRFSGHK 609
K++F H+
Sbjct: 131 DEKMKFDYHR 140
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +1
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRF-SGHKGVITSVSFI--NGKN 648
HK + + F+ +G L+SGS D V+LWD K+ F SGH + F+ +
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSDDR 117
Query: 649 CIVTSSKDTFVK 684
IVT + D V+
Sbjct: 118 TIVTCAADGMVR 129
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +1
Query: 604 HKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTL-GGHQMEVWAAVLL--KEER 774
HKG + +VSF + +++ S D V WD + + + GH V+ A + ++R
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSDDR 117
Query: 775 YLVTGSMDQELR 810
+VT + D +R
Sbjct: 118 TIVTCAADGMVR 129
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = +1
Query: 313 DMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAI 492
D++ + L G V L SP + +A G D ++++ + V GH S +
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLV 163
Query: 493 TCLQFDDQGHRLVSGSKDTEVILWDVISETGKV-RFSGH 606
+ +D G + S S D VI+W S+ G R GH
Sbjct: 164 KGVTWDPIGSFIASQSDDKTVIIWRT-SDWGMAHRTDGH 201
Score = 34.7 bits (76), Expect = 0.084
Identities = 20/84 (23%), Positives = 36/84 (42%)
Frame = +1
Query: 439 ELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVI 618
++ N + V GH + + L + L SGS D V +W++ + GH ++
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLV 163
Query: 619 TSVSFINGKNCIVTSSKDTFVKFW 690
V++ + I + S D V W
Sbjct: 164 KGVTWDPIGSFIASQSDDKTVIIW 187
Score = 32.7 bits (71), Expect = 0.34
Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 21/187 (11%)
Frame = +1
Query: 322 LGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTN----NEVVCVFAGHKSA 489
+ EK + E + + + P G A G D +L N ++ H +
Sbjct: 2 IAEKPFWVKHEGLQIFSIDVQPNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHFGS 61
Query: 490 ITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFS-----------------GHKGVI 618
+ C+++ + SGS D + + + +G F GH +
Sbjct: 62 VNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADV 121
Query: 619 TSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMD 798
+++ + + + S D V W++ T C L GH V ++ + S D
Sbjct: 122 VDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDD 181
Query: 799 QELRVWK 819
+ + +W+
Sbjct: 182 KTVIIWR 188
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 691 DIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
D+E TL GH +V ++ L +GS+D + +W +
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNM 147
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 622 SVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVL-LKEERYLVTGSMD 798
+ +F + + ++ D VK D ET C K L GH+ W + + +GS+D
Sbjct: 108 AAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLD 167
Query: 799 QELRVWKLNWTEDVKDDD 852
E+R+W E ++ D
Sbjct: 168 HEVRLWNAKTGECIRTHD 185
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 622 SVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVL-LKEERYLVTGSMD 798
+ +F + + ++ D VK D ET C K L GH+ W + + +GS+D
Sbjct: 108 AAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLD 167
Query: 799 QELRVWKLNWTEDVKDDD 852
E+R+W E ++ D
Sbjct: 168 HEVRLWNAKTGECIRTHD 185
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 41.5 bits (93), Expect = 7e-04
Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Frame = +1
Query: 472 AGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGH---KGVITSVSFING 642
+G AI +++ G ++ SKD + L+D +S VR G+ K +TS F
Sbjct: 171 SGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKC-VRSIGNAHGKSEVTSAVFTKD 229
Query: 643 KNCIVTSSKDTFVKFWDIETKHCFKT-LGGHQMEVWAAVLLKE-ERYLVT-GSMDQELRV 813
+ +++S KD+ VK W+I + K LG ++++ + + + E ++++ E+
Sbjct: 230 QRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEVVT 289
Query: 814 WKLNWTEDV 840
W + V
Sbjct: 290 WDARTADKV 298
Score = 37.5 bits (83), Expect = 0.012
Identities = 38/168 (22%), Positives = 65/168 (38%), Gaps = 13/168 (7%)
Frame = +1
Query: 331 KAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTN-----------NEVVCVFAG 477
+++ L VV SP G A G D +I +FE+ ++ F
Sbjct: 23 ESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYD 82
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGV--ITSVSFINGKNC 651
H I L F + L+S +KD + +D T K F + + S+SF
Sbjct: 83 HAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEF 142
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSM 795
++ + +D+ T CF L + + + + + RY TGS+
Sbjct: 143 LLAGTDHPIPHLYDVNTYQCF--LPSNFPDSGVSGAINQVRYSSTGSI 188
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 41.5 bits (93), Expect = 7e-04
Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Frame = +1
Query: 472 AGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGH---KGVITSVSFING 642
+G AI +++ G ++ SKD + L+D +S VR G+ K +TS F
Sbjct: 263 SGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKC-VRSIGNAHGKSEVTSAVFTKD 321
Query: 643 KNCIVTSSKDTFVKFWDIETKHCFKT-LGGHQMEVWAAVLLKE-ERYLVT-GSMDQELRV 813
+ +++S KD+ VK W+I + K LG ++++ + + + E ++++ E+
Sbjct: 322 QRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEVVT 381
Query: 814 WKLNWTEDV 840
W + V
Sbjct: 382 WDARTADKV 390
Score = 37.5 bits (83), Expect = 0.012
Identities = 38/168 (22%), Positives = 65/168 (38%), Gaps = 13/168 (7%)
Frame = +1
Query: 331 KAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTN-----------NEVVCVFAG 477
+++ L VV SP G A G D +I +FE+ ++ F
Sbjct: 115 ESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYD 174
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGV--ITSVSFINGKNC 651
H I L F + L+S +KD + +D T K F + + S+SF
Sbjct: 175 HAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEF 234
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSM 795
++ + +D+ T CF L + + + + + RY TGS+
Sbjct: 235 LLAGTDHPIPHLYDVNTYQCF--LPSNFPDSGVSGAINQVRYSSTGSI 280
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 41.5 bits (93), Expect = 7e-04
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISE--TGKVRFSGHKGVITSVSFINGKN 648
GH+ ++ + +L +GSKD + +WD S TG ++ G G + S G
Sbjct: 149 GHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEIGCVLS----EGPW 204
Query: 649 CIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
+V VK W+IET + ++L G +V++ V+ + L G+ D + W+ N
Sbjct: 205 LLV--GMPNLVKAWNIET-NADQSLSGPVGQVYSLVVGTD--LLFAGTQDGSILAWRYN 258
Score = 33.9 bits (74), Expect = 0.15
Identities = 18/82 (21%), Positives = 39/82 (47%)
Frame = +1
Query: 592 RFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEE 771
+ GH+ +++ ++ +G + + T SKD ++ WD + C L ++ +L E
Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVL---KLGGEIGCVLSEG 202
Query: 772 RYLVTGSMDQELRVWKLNWTED 837
+L+ G M ++ W + D
Sbjct: 203 PWLLVG-MPNLVKAWNIETNAD 223
Score = 32.3 bits (70), Expect = 0.45
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 4/165 (2%)
Frame = +1
Query: 343 LPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGH 522
L G +V+ +A + + G D + V++ + + V I C+ +G
Sbjct: 147 LDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLK-LGGEIGCVL--SEGP 203
Query: 523 RLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIET 702
L+ G + V W++ + + SG G + S+ + G + + ++D + W
Sbjct: 204 WLLVGMPNL-VKAWNIETNADQ-SLSGPVGQVYSL--VVGTDLLFAGTQDGSILAWRYNA 259
Query: 703 K-HCFK---TLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
+CF+ +L GH + V L L +GSMD+ ++VW L+
Sbjct: 260 ATNCFEPSASLTGHTLAV--VTLYVGANRLYSGSMDKTIKVWSLD 302
Score = 29.1 bits (62), Expect = 4.2
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 5/146 (3%)
Frame = +1
Query: 268 GRYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMA-VGLFDGNINVFEL 444
G ++ VG V W+++ Q L G V Q+ + G + G DG+I +
Sbjct: 202 GPWLLVGMPNLVKAWNIETNAD-QSLSGP---VGQVYSLVVGTDLLFAGTQDGSILAWRY 257
Query: 445 ---TNN-EVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKG 612
TN E GH A+ L +RL SGS D + +W + + + H
Sbjct: 258 NAATNCFEPSASLTGHTLAVVTLYVG--ANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSS 315
Query: 613 VITSVSFINGKNCIVTSSKDTFVKFW 690
V+ +S I +++ S D VK W
Sbjct: 316 VV--MSLICWDQFLLSCSLDNTVKIW 339
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 622 SVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLV-TGSMD 798
+ +F + ++ D VK D ET +C K L GH+ W +V +GS+D
Sbjct: 111 AAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLD 170
Query: 799 QELRVWKLNWTEDVK 843
E+R+W +E ++
Sbjct: 171 LEVRLWNTTTSECIR 185
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 41.5 bits (93), Expect = 7e-04
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +1
Query: 460 VCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGH---KGVI-TSV 627
V V GH+ ++ + F L +GS D E+ +WD I H GV+ +
Sbjct: 10 VAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAA 69
Query: 628 SFINGKNCIVTSSKDTFVKFWDIE 699
S G++ I++ +D VK WDIE
Sbjct: 70 SPWLGEDKIISQGRDGTVKCWDIE 93
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 41.5 bits (93), Expect = 7e-04
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Frame = +1
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIV 657
H AI+CL + L SGS D +W V + H+ + +V ++G + +V
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAV--VSGFDGLV 267
Query: 658 -TSSKDTFVKFWDIE-----TKHCF-KTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
T S D VK W E TKH F +TL V A + + + GS D + W
Sbjct: 268 FTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQSATLVYCGSSDGTVNFW 327
Query: 817 KLNWTEDVKDDDXLK-HQLEIVKL 885
+ ++K+ LK H+L ++ L
Sbjct: 328 ERE--NNMKNGGVLKGHKLAVLCL 349
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 41.5 bits (93), Expect = 7e-04
Identities = 41/159 (25%), Positives = 62/159 (38%), Gaps = 5/159 (3%)
Frame = +1
Query: 361 VVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGH-RLVSG 537
VV+ + G A G + VF++ + H + +++ Q LVSG
Sbjct: 95 VVSSVCFRSDGALFAACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSG 154
Query: 538 SKDTEVILWDVISETGKVRFSGHKGVIT--SVSFINGKNCIVTSSKDTFVKFWD--IETK 705
D V WDV T GHK + S +N + +VT S D VK WD + T
Sbjct: 155 GDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVN-DSMLVTGSYDHTVKVWDARVHTS 213
Query: 706 HCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
+ + H + V V L + T ++VW L
Sbjct: 214 NWIAEI-NHGLPVEDVVYLPSGGLIATAG-GNSVKVWDL 250
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCI 654
GH+ +T L+++ G L S +KD +W + + GH G + + +
Sbjct: 35 GHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRL 94
Query: 655 VTSSKDTFVKFWDIET 702
+T S D K WD+++
Sbjct: 95 ITGSADQTAKLWDVKS 110
Score = 41.1 bits (92), Expect = 0.001
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +1
Query: 340 VLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQG 519
++ G +T L + G+ + D V+ N E + + GH A+ C
Sbjct: 32 LMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDS 91
Query: 520 HRLVSGSKDTEVILWDVISETGKVRFSGHKGV-ITSVSFINGKNCIVTSSKDTFV 681
RL++GS D LWDV ++GK F+ G SV F G + V ++ D FV
Sbjct: 92 SRLITGSADQTAKLWDV--KSGKELFTFKFGAPARSVDFSVGDHLAVITT-DHFV 143
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +1
Query: 526 LVSGSKDTEVILWDVISETGKVRFS-----GHKGVITSVSFINGKNCIVTSSKDTFVKFW 690
+VSG +D + +WD +ETGK+ GHK ITS+ + +T S D K W
Sbjct: 190 IVSGGEDAAIRIWD--AETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLW 247
Query: 691 DIETKHCFKT 720
D+ T KT
Sbjct: 248 DMRTLTLIKT 257
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +1
Query: 589 VRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKE 768
+ GH+ +T + + + + + +KD W + T GH VW + ++
Sbjct: 31 ILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRD 90
Query: 769 ERYLVTGSMDQELRVW 816
L+TGS DQ ++W
Sbjct: 91 SSRLITGSADQTAKLW 106
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +1
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLG---GHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
IV+ +D ++ WD ET K GH+ + + ++ + +TGS D+ ++W +
Sbjct: 190 IVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDM 249
Score = 27.9 bits (59), Expect = 9.6
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 391 GNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCL-QFDDQGHRLVSGSKDTEVILWD 567
G A+ ++D ++E V GHK AIT L + D H L +GS D LWD
Sbjct: 194 GEDAAIRIWDAETGKLLKQSDEEV----GHKEAITSLCKAADDSHFL-TGSHDKTAKLWD 248
Query: 568 V 570
+
Sbjct: 249 M 249
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Frame = +1
Query: 526 LVSGSKDTEVILWDV-ISETGKVR-----FSGHKGVITSVSF-INGKNCIVTSSKDTFVK 684
L+SGS+D + LWDV + T KV + GH+ +I V++ + +N ++ D +
Sbjct: 185 LLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLV 244
Query: 685 FWDIETKHCFKTLGGHQMEV-WAAVLLKEERYLVTGSMDQELRVWKL 822
WD+ T + H+ E+ + + E L T S D + ++ L
Sbjct: 245 IWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDL 291
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/158 (21%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Frame = +1
Query: 241 THVTLNGISGRYIAVGACE-HVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLF 417
T V N ++ A G+ + IW + E+ ++ ++ P GN VG
Sbjct: 316 TCVEFNPVNKNNFASGSIDGKARIWGLS-EERVVAWTDVRDSISAISYQPNGNGFVVGCI 374
Query: 418 DGNINVFELTNNEVVC---VFAGHKSAITCLQF-DDQGHRLVSGSKDTEVILWDVISETG 585
GN +++ +N+V+ + ++ IT ++F +++ S+D++V ++D
Sbjct: 375 TGNCRFYQILDNDVIMDEQILIRGRNRITAVEFCPGSSEKILVSSEDSKVRIFDKTQMIH 434
Query: 586 KVRFSGHKGVITSVSFIN--GKNCIVTSSKDTFVKFWD 693
K + + G +S SF++ GK+ I++ + V W+
Sbjct: 435 KFKAPSNFGRQSSASFVSSTGKH-ILSVRRGVGVYLWN 471
Score = 38.7 bits (86), Expect = 0.005
Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 7/177 (3%)
Frame = +1
Query: 337 QVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELT-NNEVVCVFAGHKSAITCLQFDD 513
Q + G + L SP G ++A G DG + ++ +T ++ ++ F + I +
Sbjct: 192 QKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLLASFLRQQEPI-----NQ 246
Query: 514 QGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWD 693
Q ++ K I ET GH G + +++ + N ++++SKD V+ W
Sbjct: 247 QAALVLFPQKAFH------IEETPFQELYGHTGDVLDLAW-SDSNLLLSASKDKTVRLWR 299
Query: 694 IETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN------WTEDVKD 846
C + + +GS+D + R+W L+ WT DV+D
Sbjct: 300 TGCDQCLHVFHHNNYVTCVEFNPVNKNNFASGSIDGKARIWGLSEERVVAWT-DVRD 355
Score = 33.5 bits (73), Expect = 0.19
Identities = 9/50 (18%), Positives = 27/50 (54%)
Frame = +1
Query: 691 DIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTEDV 840
++ + + + GH+ ++W + +YL TG D +++W++ ++ +
Sbjct: 184 ELSAAYMVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSL 233
Score = 31.5 bits (68), Expect = 0.78
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Frame = +1
Query: 439 ELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDV-ISETGKVRFSGHKGV 615
EL+ +V GHK I L+F G L +G +D V +W + +S++ F
Sbjct: 184 ELSAAYMVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLLASF------ 237
Query: 616 ITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSM 795
+ IN + +V + F IE + F+ L GH +V + + L++ S
Sbjct: 238 LRQQEPINQQAALVLFPQKAF----HIE-ETPFQELYGHTGDV-LDLAWSDSNLLLSASK 291
Query: 796 DQELRVWK 819
D+ +R+W+
Sbjct: 292 DKTVRLWR 299
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 367 TQLAASPTGNHM-AVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
T LA P N++ A+G+ D I ++ + +EV GH IT L F + + LVS
Sbjct: 869 TFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGA 928
Query: 544 DTEVILWD 567
D ++ +W+
Sbjct: 929 DAQLCVWN 936
Score = 39.1 bits (87), Expect = 0.004
Identities = 35/139 (25%), Positives = 52/139 (37%), Gaps = 7/139 (5%)
Frame = +1
Query: 307 IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAV--GLFDGNINVFELTNNEVVCVFAGH 480
+WD G K G V + N + DG I + N +
Sbjct: 490 VWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYDNMGSRVDYEAP 549
Query: 481 KSAITCLQFDDQGHRLVS--GSKDTE--VILWDVISETGKVRFSG-HKGVITSVSFINGK 645
T + + G RL S SKD E ++ W+ K + G HK + V F K
Sbjct: 550 GRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTK 609
Query: 646 NCIVTSSKDTFVKFWDIET 702
N + + D +KFWD++T
Sbjct: 610 NRYLAAGDDFSIKFWDMDT 628
Score = 34.7 bits (76), Expect = 0.084
Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +1
Query: 589 VRFSGHKGVITSVSFI--NGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLL 762
+ H G + ++F N + C+ T D +K WD T T GH+ V++
Sbjct: 456 LEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPH 515
Query: 763 KEE--RYLVTGSMDQELRVW 816
+E +++ + ++D +++ W
Sbjct: 516 YKENIQFIFSTALDGKIKAW 535
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 343 LPGENVVVTQLAASPTGNHM-AVGLFDGNINVFELTNNE 456
L NV +AA P ++M AVGL DG +++FE +E
Sbjct: 1049 LSNSNVHPLVIAAHPQESNMFAVGLSDGGVHIFEPLESE 1087
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 367 TQLAASPTGNHM-AVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
T LA P N++ A+G+ D I ++ + +EV GH IT L F + + LVS
Sbjct: 869 TFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGA 928
Query: 544 DTEVILWD 567
D ++ +W+
Sbjct: 929 DAQLCVWN 936
Score = 39.1 bits (87), Expect = 0.004
Identities = 35/139 (25%), Positives = 52/139 (37%), Gaps = 7/139 (5%)
Frame = +1
Query: 307 IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAV--GLFDGNINVFELTNNEVVCVFAGH 480
+WD G K G V + N + DG I + N +
Sbjct: 490 VWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYDNMGSRVDYEAP 549
Query: 481 KSAITCLQFDDQGHRLVS--GSKDTE--VILWDVISETGKVRFSG-HKGVITSVSFINGK 645
T + + G RL S SKD E ++ W+ K + G HK + V F K
Sbjct: 550 GRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTK 609
Query: 646 NCIVTSSKDTFVKFWDIET 702
N + + D +KFWD++T
Sbjct: 610 NRYLAAGDDFSIKFWDMDT 628
Score = 34.7 bits (76), Expect = 0.084
Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +1
Query: 589 VRFSGHKGVITSVSFI--NGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLL 762
+ H G + ++F N + C+ T D +K WD T T GH+ V++
Sbjct: 456 LEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPH 515
Query: 763 KEE--RYLVTGSMDQELRVW 816
+E +++ + ++D +++ W
Sbjct: 516 YKENIQFIFSTALDGKIKAW 535
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 343 LPGENVVVTQLAASPTGNHM-AVGLFDGNINVFELTNNE 456
L NV +AA P ++M AVGL DG +++FE +E
Sbjct: 1049 LSNSNVHPLVIAAHPQESNMFAVGLSDGGVHIFEPLESE 1087
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +1
Query: 400 MAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVI 573
++ G ++ + +V LT+ VV HK ++C+ L +GS DT V++WD++
Sbjct: 1019 VSCGNWENSFHVISLTDGRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDIL 1076
Score = 37.1 bits (82), Expect = 0.016
Identities = 26/112 (23%), Positives = 54/112 (48%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
V++LAAS G + G D +++++ + + + I CL+ G LVS
Sbjct: 1157 VSKLAASHHGRIVLYGDDDLSLHLYSINGKHLAS--SESNGRINCLELSKCGEFLVSAGD 1214
Query: 544 DTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIE 699
++I+ + + R++G +ITS++ + + C + +KD + + IE
Sbjct: 1215 QGQIIVRSMNTLEVVKRYNGAGKIITSLT-VTQEECFLAGTKDGALLVYSIE 1265
Score = 29.5 bits (63), Expect = 3.1
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 2/128 (1%)
Frame = +1
Query: 466 VFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHK--GVITSVSFIN 639
+ GH ITCL ++SGSKD + + + E +R H ++ ++ +
Sbjct: 1106 ILCGHDDIITCLYVSTDLDIVISGSKDGTCV-FHTLREGRYIRSLKHPSGSAVSKLAASH 1164
Query: 640 GKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWK 819
++ D + + I KH + ++ L K +LV+ ++ V
Sbjct: 1165 HGRIVLYGDDDLSLHLYSINGKHLASSESNGRIN--CLELSKCGEFLVSAGDQGQIIVRS 1222
Query: 820 LNWTEDVK 843
+N E VK
Sbjct: 1223 MNTLEVVK 1230
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 604 HKGVITSVSFINGKNCIVTSSKDTFVKFWDI 696
HK V++ V+ + T S DT V WDI
Sbjct: 1045 HKDVVSCVAVTADSTILATGSYDTTVMVWDI 1075
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 367 TQLAASPTGNHM-AVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
T LA P N++ A+G+ D I ++ + +EV GH IT L F + + LVS
Sbjct: 880 TFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGA 939
Query: 544 DTEVILWD 567
D ++ +W+
Sbjct: 940 DAQLCVWN 947
Score = 39.1 bits (87), Expect = 0.004
Identities = 37/158 (23%), Positives = 57/158 (36%), Gaps = 7/158 (4%)
Frame = +1
Query: 277 IAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAV--GLFDGNINVFELTN 450
I G + + +WD G K G V + N + DG I + N
Sbjct: 480 ITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDN 539
Query: 451 NEVVCVFAGHKSAITCLQFDDQGHRLVS--GSKDTE--VILWDVISETGKVRFSG-HKGV 615
+ T + + G RL S SKD E ++ W+ K + G HK
Sbjct: 540 MGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRS 599
Query: 616 ITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGG 729
+ V F KN + + D +KFWD++ + G
Sbjct: 600 LGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDG 637
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +1
Query: 589 VRFSGHKGVITSVSFI--NGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLL 762
+ H G + +SF N + C++T D +K WD T T GH+ V++
Sbjct: 456 LEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPH 515
Query: 763 KEE--RYLVTGSMDQELRVW 816
+E +++ + ++D +++ W
Sbjct: 516 YKENIQFIFSTALDGKIKAW 535
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 343 LPGENVVVTQLAASPTGNHM-AVGLFDGNINVFELTNNE 456
L NV +AA P +M AVGL DG +++FE +E
Sbjct: 1060 LSNSNVHPLVIAAHPQEPNMFAVGLSDGGVHIFEPLESE 1098
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 367 TQLAASPTGNHM-AVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
T LA P N++ A+G+ D I ++ + +EV GH IT L F + + LVS
Sbjct: 880 TFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGA 939
Query: 544 DTEVILWD 567
D ++ +W+
Sbjct: 940 DAQLCVWN 947
Score = 39.1 bits (87), Expect = 0.004
Identities = 37/158 (23%), Positives = 57/158 (36%), Gaps = 7/158 (4%)
Frame = +1
Query: 277 IAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAV--GLFDGNINVFELTN 450
I G + + +WD G K G V + N + DG I + N
Sbjct: 480 ITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDN 539
Query: 451 NEVVCVFAGHKSAITCLQFDDQGHRLVS--GSKDTE--VILWDVISETGKVRFSG-HKGV 615
+ T + + G RL S SKD E ++ W+ K + G HK
Sbjct: 540 MGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRS 599
Query: 616 ITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGG 729
+ V F KN + + D +KFWD++ + G
Sbjct: 600 LGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDG 637
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +1
Query: 589 VRFSGHKGVITSVSFI--NGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLL 762
+ H G + +SF N + C++T D +K WD T T GH+ V++
Sbjct: 456 LEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPH 515
Query: 763 KEE--RYLVTGSMDQELRVW 816
+E +++ + ++D +++ W
Sbjct: 516 YKENIQFIFSTALDGKIKAW 535
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 343 LPGENVVVTQLAASPTGNHM-AVGLFDGNINVFELTNNE 456
L NV +AA P +M AVGL DG +++FE +E
Sbjct: 1060 LSNSNVHPLVIAAHPQEPNMFAVGLSDGGVHIFEPLESE 1098
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQG 519
VT L P G +AVGL DG I++ ++ N +++ H A+ CL +++ G
Sbjct: 67 VTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPHDVAVVCLNWEEDG 118
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +1
Query: 454 EVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISE--TGKVRFSGHKGVITSV 627
EV+ + H I C+ F+ +G L +G D ++WD + ++R + ITSV
Sbjct: 15 EVIEEYLEH-GVIKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSV 73
Query: 628 SFINGKNCIVTSSKDTFVKFWDIET 702
S+ + ++ S+ D + WD+ T
Sbjct: 74 SWSKYGHRLLVSAADKSLTLWDVST 98
Score = 36.3 bits (80), Expect = 0.027
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 352 ENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGH--KSAITCLQFDDQGHR 525
E+ V+ +A + G+ +A G DG +++ + + +AIT + + GHR
Sbjct: 22 EHGVIKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHR 81
Query: 526 LVSGSKDTEVILWDV 570
L+ + D + LWDV
Sbjct: 82 LLVSAADKSLTLWDV 96
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
V++L SP N++ V +D + ++++ ++ + + + C F+++ SGS
Sbjct: 16 VSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCC-FENESTSFTSGS- 73
Query: 544 DTEVILWDVISETGKVRFSG-HKGVITSVSFINGKNCIVTSSKDTFVKFWD 693
D + +D+ G V G H + TS+ + K ++++ D +KFWD
Sbjct: 74 DGFIRRYDL--NAGTVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWD 122
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
V++L SP N++ V +D + ++++ ++ + + + C F+++ SGS
Sbjct: 16 VSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCC-FENESTSFTSGS- 73
Query: 544 DTEVILWDVISETGKVRFSG-HKGVITSVSFINGKNCIVTSSKDTFVKFWD 693
D + +D+ G V G H + TS+ + K ++++ D +KFWD
Sbjct: 74 DGFIRRYDL--NAGTVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWD 122
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 39.9 bits (89), Expect = 0.002
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 8/142 (5%)
Frame = +1
Query: 478 HKSAITCLQF-DDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCI 654
H A++CL +DQG L S S D V +W + H + SV+ ++ +
Sbjct: 134 HSDAVSCLSLAEDQG-LLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVT--TAESLV 190
Query: 655 VTSSKDTFVKFWDIE-----TKH-CFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
T S D VK W E T H F+TL + V A L+ + +GS D + W
Sbjct: 191 FTGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTA--LVTSHMAVYSGSSDGAVNFW 248
Query: 817 KLNWTEDVKDDDXL-KHQLEIV 879
++ + +K + KH+L ++
Sbjct: 249 EMGDKKLLKHCEVFKKHRLAVL 270
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 39.5 bits (88), Expect = 0.003
Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Frame = +1
Query: 484 SAITCLQFDDQGHRLVSGSKD---TEVILWDVISETGKVRFSGHKGVITSVSF-INGKNC 651
S CL +D +V G D + V D ET + + GH + + SF +N N
Sbjct: 120 SMCLCLDWDPSSTSIVVGLSDGSASVVSFTDSNLETVQ-EWKGHDFELWTASFDLNNPNL 178
Query: 652 IVTSSKDTFVKFWDIETK----HCFKTLGGHQMEVWAAVLLKEERYLV-TGSMDQELRVW 816
+ T S D WDI F+ H M V + Y + TGS D+ LRVW
Sbjct: 179 VYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLRVW 238
Score = 39.1 bits (87), Expect = 0.004
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Frame = +1
Query: 385 PTGNHMAVGLFDGNINVFELT--NNEVVCVFAGHKSAITCLQFDDQGHRLV-SGSKDTEV 555
P+ + VGL DG+ +V T N E V + GH + FD LV +GS D +
Sbjct: 129 PSSTSIVVGLSDGSASVVSFTDSNLETVQEWKGHDFELWTASFDLNNPNLVYTGSDDCKF 188
Query: 556 ILWDVISETGKVR-FSGHK----GVITSVSFINGKNCIVTSSKDTFVKFWD 693
WD+ R F K GV S + I T S D ++ WD
Sbjct: 189 SCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLRVWD 239
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Frame = +1
Query: 349 GENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQ--FDDQGH 522
G+ V + S G M + + NI V + E C F+ S T ++ F G
Sbjct: 198 GDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTPDGK 257
Query: 523 RLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFW 690
++SGS D + W++ + + R+ + GV++ + + + V +S T + FW
Sbjct: 258 YVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAAS--TVLTFW 311
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 424 NINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDV 570
++ + +N ++ F GHK + L +SGS D V LWD+
Sbjct: 95 SLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDL 143
Score = 31.5 bits (68), Expect = 0.78
Identities = 44/209 (21%), Positives = 76/209 (36%), Gaps = 6/209 (2%)
Frame = +1
Query: 232 CNSTHVTLNGISGRYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVG 411
C + H + S RY E + M + G V L SP + G
Sbjct: 73 CFTHHPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSG 132
Query: 412 LFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDV-ISETGK 588
D ++ +++L N C H + +D QG + V L+D + G
Sbjct: 133 SLDRSVRLWDLRVN--ACQGILHLRGRPAVAYDQQGLVFAIAMEGGAVKLFDSRCYDKGP 190
Query: 589 VR---FSGHKGVITSVSFIN-GKNCIVTSSKDT-FVKFWDIETKHCFKTLGGHQMEVWAA 753
G + + F N GK+ ++T++ + +V K C +L Q A
Sbjct: 191 FDTFLVGGDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEA 250
Query: 754 VLLKEERYLVTGSMDQELRVWKLNWTEDV 840
+ +Y+++GS D L W + +V
Sbjct: 251 TFTPDGKYVLSGSGDGTLHAWNIENPSEV 279
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/126 (21%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = +1
Query: 466 VFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITS-VSFING 642
VF+ I + F LV+ S+D + L+D I+ +++ + HK T V F +
Sbjct: 19 VFSDFGGKIHSVGFHRTDDLLVTSSEDDSLRLFD-IANAKQLKITYHKKHGTDRVCFTHH 77
Query: 643 KNCIVTSSKDTF------VKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQE 804
+ ++ SS+ +++ + + GH+ V + + ++GS+D+
Sbjct: 78 PSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRS 137
Query: 805 LRVWKL 822
+R+W L
Sbjct: 138 VRLWDL 143
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Frame = +1
Query: 421 GNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFS 600
G ++ ++T+ +V K ++ + + G V +W S+ V+
Sbjct: 219 GQLHYQDVTHGGMVASIRTGKGRTDVMEVNPYNSVVGLGHSGGTVTMWKPTSQAPLVQMQ 278
Query: 601 GHKGVITSVSFINGKNCIVTSSKDTFVKFWD------IETKHCF--KTLGGHQMEVWAA 753
H G ++SV+F + + TS K+ +K WD ++T H F KTL Q + AA
Sbjct: 279 CHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTIHSFHAKTLSFSQKGLLAA 337
Score = 31.5 bits (68), Expect = 0.78
Identities = 11/66 (16%), Positives = 32/66 (48%)
Frame = +1
Query: 373 LAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTE 552
+ +P + + +G G + +++ T+ + H ++ + F GH + + K+ +
Sbjct: 245 MEVNPYNSVVGLGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERK 304
Query: 553 VILWDV 570
+ +WD+
Sbjct: 305 IKIWDL 310
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 589 VRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFK 717
+ + GH G +TS+S + I + S D V+ W++ET C K
Sbjct: 417 LEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLK 459
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 451 NEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGK 588
N + GH A+T + D G + SGS D V +W+V ETG+
Sbjct: 413 NSCYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEV--ETGR 456
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 39.5 bits (88), Expect = 0.003
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 8/145 (5%)
Frame = +1
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIV 657
H A++CL +D+ L S S D + +W + H + SV ++ IV
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSV--VSTTEAIV 262
Query: 658 TS-SKDTFVKFWDIE-----TKH-CFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
S S D VK W + TKH +TL + V A + K + GS D + W
Sbjct: 263 FSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFW 322
Query: 817 KLNWTEDVKDDDXLK-HQLEIVKLE 888
+ + + LK H+L ++ LE
Sbjct: 323 ERE--KQLNYGGILKGHKLAVLCLE 345
Score = 32.7 bits (71), Expect = 0.34
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 19/219 (8%)
Frame = +1
Query: 217 IASADCNSTHVTLNGISGRYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGN 396
I AD S ++LN G + + +W + + + +P + V + S T
Sbjct: 203 IKHADAVSC-LSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVV-STTEA 260
Query: 397 HMAVGLFDGNINVFE------LTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVI 558
+ G DG + ++ T + ++ +SA+T L G + GS D V
Sbjct: 261 IVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVN 320
Query: 559 LWDVISET--GKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFW--DIETKHCFKTLG 726
W+ + G + GHK + + + + + S D + W D C L
Sbjct: 321 FWEREKQLNYGGI-LKGHKLAVLCLEVAG--SLVFSGSADKTICVWKRDGNIHTCLSVLT 377
Query: 727 GHQMEVWAAVL--------LKEERYLV-TGSMDQELRVW 816
GH V + ++++++V +GS+D+ ++VW
Sbjct: 378 GHTGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVW 416
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 39.5 bits (88), Expect = 0.003
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Frame = +1
Query: 313 DMKLGEKAQVLPGENVVVTQLAAS--PTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKS 486
D + GE +V+ V QLA + P G+ +A G DG + VF+ + + + S
Sbjct: 137 DNQAGESEEVIKELRDVGQQLALAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHS 196
Query: 487 AITCLQFDDQGHRLVS-GSKDTEVILWDVISETGKVRFSGHK 609
++ CL F + G LVS G V WDV + S K
Sbjct: 197 SVKCLTFSESGQFLVSLGGPVCRV--WDVNASAAVASLSKEK 236
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Frame = +1
Query: 487 AITCLQFDDQGHRLVSGSKDTEVILWDVISET-GKVRFSGHKG------VITSVSFIN-G 642
A+ ++++ + S +D ++ LW ++ G V +G G ++++SF G
Sbjct: 45 AVNSVKWNHTNLVVASTGEDKKISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKG 104
Query: 643 KNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
I + VK WD++ K C K L GH + + ++ +L + S+ +L V L
Sbjct: 105 SRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNL 164
Score = 33.1 bits (72), Expect = 0.26
Identities = 40/176 (22%), Positives = 66/176 (37%), Gaps = 5/176 (2%)
Frame = +1
Query: 151 KVSSMGLTKQYLRYAP-TGSFNIIASADCNSTHVTLNGISGRYIAVGAC-EHVIIWDMKL 324
K+S Q L P TG ++ +C S ++ + RYI G + V IWD++
Sbjct: 66 KISLWRKNGQSLGTVPVTGKDGGDSAEECLSA-ISFSKKGSRYICSGGTGQIVKIWDLQR 124
Query: 325 GEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAG-HKSAITCL 501
+ L G +T + + H+A G++ V L + + + L
Sbjct: 125 KLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQVLRLL 184
Query: 502 QFD-DQGHRLVSGSKDTEVILWDVISETGKVRF-SGHKGVITSVSFINGKNCIVTS 663
+ H LV+ D V LWD + K+ + H V F I+ S
Sbjct: 185 DYSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIAS 240
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 39.1 bits (87), Expect = 0.004
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +1
Query: 373 LAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTE 552
+A + G + G D +I + + + GH + +TCL + LV+GS+D+
Sbjct: 2632 IAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDST 2691
Query: 553 VILWDV----ISETGKVRFSGHKGVITSVSFINGKNCIVTSSK 669
V+LW + S T S G +S S N N + K
Sbjct: 2692 VLLWRIHKAFTSRTSVSEPSTGSGAPSSTSNTNLANTLANKGK 2734
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 619 TSVSFINGKNCIVTSSK-DTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSM 795
+SV I I+T D +K + +T GH V L + +LVTGS
Sbjct: 2629 SSVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSR 2688
Query: 796 DQELRVWKLN 825
D + +W+++
Sbjct: 2689 DSTVLLWRIH 2698
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 39.1 bits (87), Expect = 0.004
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Frame = +1
Query: 526 LVSGSKDTEVILWDV-ISETGKVR-----FSGHKGVITSVSF-INGKNCIVTSSKDTFVK 684
L+SGS+D ++ LWDV + KV + GH+ I VS+ + +N ++ +D +
Sbjct: 184 LLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLV 243
Query: 685 FWDIETKHCFKTLGGHQMEV-WAAVLLKEERYLVTGSMDQELRVWKL 822
WD T + H+ EV + + E L T S D + ++ L
Sbjct: 244 IWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDL 290
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +1
Query: 484 SAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTS 663
+ I L + + GH + +GS D + W + + SGHK V++++ +NG + +
Sbjct: 587 TGIHALAYSEYGH-VYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVNG--VLYSG 643
Query: 664 SKDTFVKFWDIETKHCFKTLG 726
S D V+ W + LG
Sbjct: 644 SWDGTVRLWSLSDNSLLTVLG 664
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 652 IVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
+ T S D +K W ++ T+ GH+ V V++ Y +GS D +R+W L+
Sbjct: 600 VYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVNGVLY--SGSWDGTVRLWSLS 655
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 38.3 bits (85), Expect = 0.007
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 15/123 (12%)
Frame = +1
Query: 247 VTLNGISGRYIAVGACEHVIIWDMKLGEKAQVLPG---------ENVVVTQLAASPTGNH 399
V + ISG GA + +W + G+ + +P V + SP+G
Sbjct: 19 VDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGEL 78
Query: 400 MAVGLFDGNINVFELTNNEVVCVFAGHKSA------ITCLQFDDQGHRLVSGSKDTEVIL 561
+A G G + +++L +E + HKS + LQ+ L+SGS D I+
Sbjct: 79 LASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCII 138
Query: 562 WDV 570
WDV
Sbjct: 139 WDV 141
Score = 34.7 bits (76), Expect = 0.084
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 6/119 (5%)
Frame = +1
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDV-ISETG---KVR--FSGHKGVITSVSFIN 639
H A+ ++F G L SG+ E+ +W + SET KV S H+ + + +
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 640 GKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
+++ S D WD+ + L H V +Y+ + S D+ R++
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 715 KTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
K+L H+ +V ++ YL++GS+D +W +N
Sbjct: 106 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVN 142
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 38.3 bits (85), Expect = 0.007
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 15/123 (12%)
Frame = +1
Query: 247 VTLNGISGRYIAVGACEHVIIWDMKLGEKAQVLPG---------ENVVVTQLAASPTGNH 399
V + ISG GA + +W + G+ + +P V + SP+G
Sbjct: 19 VDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGEL 78
Query: 400 MAVGLFDGNINVFELTNNEVVCVFAGHKSA------ITCLQFDDQGHRLVSGSKDTEVIL 561
+A G G + +++L +E + HKS + LQ+ L+SGS D I+
Sbjct: 79 LASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCII 138
Query: 562 WDV 570
WDV
Sbjct: 139 WDV 141
Score = 34.7 bits (76), Expect = 0.084
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 6/119 (5%)
Frame = +1
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDV-ISETG---KVR--FSGHKGVITSVSFIN 639
H A+ ++F G L SG+ E+ +W + SET KV S H+ + + +
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 640 GKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
+++ S D WD+ + L H V +Y+ + S D+ R++
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 715 KTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
K+L H+ +V ++ YL++GS+D +W +N
Sbjct: 106 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVN 142
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 38.3 bits (85), Expect = 0.007
Identities = 20/84 (23%), Positives = 36/84 (42%)
Frame = +1
Query: 586 KVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLK 765
K + H ++ ++ + + S D +K W C ++ + AV L
Sbjct: 158 KASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALS 217
Query: 766 EERYLVTGSMDQELRVWKLNWTED 837
E + TGS DQ ++VW+ N E+
Sbjct: 218 ENGDIYTGSSDQRIKVWRKNINEE 241
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
V ++ SP G +AV + + + +V+ GH + G L +G++
Sbjct: 280 VNNISTSPDGKLVAVLGDSPECLLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQ 339
Query: 544 DTEVILWDV--ISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIE 699
DT LWDV +S++ KV G+ G I ++ F + + + FV +D E
Sbjct: 340 DTTCRLWDVRNLSQSLKV-LKGNMGAIRALRFTSDGRFLAMAEPADFVHLFDTE 392
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 38.3 bits (85), Expect = 0.007
Identities = 33/138 (23%), Positives = 53/138 (38%), Gaps = 4/138 (2%)
Frame = +1
Query: 415 FDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQ-GHRLVSGSKDTEVILWDVISETGKV 591
+D + ++ + V F H + ++ + G S S D + +WDV +
Sbjct: 127 WDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTM 186
Query: 592 RFSGHKGVITSVSFINGKNCIV-TSSKDTFVKFWDIETKHC-FKTLGGHQMEVWAAVLLK 765
H I S + +CI+ TSS D VK WD+ + L GH V
Sbjct: 187 IIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSP 246
Query: 766 EERYLVTG-SMDQELRVW 816
R L+ S D + +W
Sbjct: 247 HRRSLIASCSYDMSVCLW 264
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +1
Query: 595 FSGHKGVITSVSFI-NGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVL-LKE 768
F H + SV + ++ +TSS D VK W ++ +T H V+ AV K
Sbjct: 102 FQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKH 161
Query: 769 ERYLVTGSMDQELRVW 816
+ S D LR+W
Sbjct: 162 GDVFASASGDCTLRIW 177
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +1
Query: 598 SGHKGVITSVSF-INGKNCIVTSSKDTFVKFWDIETKH--CFKTLGGHQMEVWAAVLLKE 768
+GH TSVS+ I+ N + T SKD VK WD+ C T + ++ +
Sbjct: 366 NGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPD 425
Query: 769 ERYLVT-GSMDQELRVW 816
+L+ G + EL++W
Sbjct: 426 NPFLLAMGGVMGELKLW 442
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Frame = +1
Query: 364 VTQLAASPTGNH-MAVGLFDGNINVFELTNNEVVC-------VFAGHKSAITCLQFDDQG 519
V LA P H V L DG + F++ + GH A T + ++
Sbjct: 322 VESLAWDPHSEHSFVVSLEDGTVKGFDVRQASISASESNPSFTINGHDEAATSVSYNISA 381
Query: 520 HRLVS-GSKDTEVILWDV 570
L++ GSKD V LWD+
Sbjct: 382 PNLLATGSKDRTVKLWDL 399
Score = 27.9 bits (59), Expect = 9.6
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 12/159 (7%)
Frame = +1
Query: 394 NHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHR-LVSGSKDTEVILWD- 567
N +A D + V+++ H + + ++ L+SGS D V+L D
Sbjct: 247 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKDG 306
Query: 568 -VISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDI--------ETKHCFKT 720
S +G ++S V + + ++ V S +D VK +D+ E+ F T
Sbjct: 307 RQPSHSG-FKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVRQASISASESNPSF-T 364
Query: 721 LGGH-QMEVWAAVLLKEERYLVTGSMDQELRVWKLNWTE 834
+ GH + + + L TGS D+ +++W L+ E
Sbjct: 365 INGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNE 403
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 409 GLFDGNINVFELTNNEVVCVF--AGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVI 573
G DG+I V+ + ++ HKS +TC + G ++SGS D + +W ++
Sbjct: 869 GFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQIV 925
Score = 31.9 bits (69), Expect = 0.59
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +1
Query: 526 LVSGSKDTEVILWDVISETGKVRFS--GHKGVITSVSFINGKNCIVTSSKDTFVKFWDI 696
L SG D + +W+V + + + HK +T S C+++ S D ++ W I
Sbjct: 866 LFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQI 924
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 415 FDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWD 567
+D ++ + L +N+ + F GH + L G +SGS D V+LWD
Sbjct: 98 WDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 148
Score = 34.7 bits (76), Expect = 0.084
Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 3/131 (2%)
Frame = +1
Query: 328 EKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQF 507
E V N ++ + T M D +I ++++ + + K + + F
Sbjct: 24 EPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCF 83
Query: 508 DDQGHRLVSGSK---DTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTF 678
++ S+ D + L + F GH + S+S +G C ++ S D
Sbjct: 84 TSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRT 143
Query: 679 VKFWDIETKHC 711
V WD + C
Sbjct: 144 VLLWDQRVEKC 154
Score = 34.7 bits (76), Expect = 0.084
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 577 ETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEV 744
E G V F + I+S+ F C+VT+S D ++ +D+ + C KT+ + V
Sbjct: 24 EPGAV-FRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGV 78
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 415 FDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWD 567
+D ++ + L +N+ + F GH + L G +SGS D V+LWD
Sbjct: 95 WDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 145
Score = 34.7 bits (76), Expect = 0.084
Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 3/131 (2%)
Frame = +1
Query: 328 EKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQF 507
E V N ++ + T M D +I ++++ + + K + + F
Sbjct: 21 EPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCF 80
Query: 508 DDQGHRLVSGSK---DTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTF 678
++ S+ D + L + F GH + S+S +G C ++ S D
Sbjct: 81 TSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRT 140
Query: 679 VKFWDIETKHC 711
V WD + C
Sbjct: 141 VLLWDQRVEKC 151
Score = 34.7 bits (76), Expect = 0.084
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 577 ETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEV 744
E G V F + I+S+ F C+VT+S D ++ +D+ + C KT+ + V
Sbjct: 21 EPGAV-FRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGV 75
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 37.5 bits (83), Expect = 0.012
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 9/131 (6%)
Frame = +1
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIV 657
H + + CL+ + S S D VI+WD +S VR + V +V +IN +
Sbjct: 3323 HTAKVICLRVSQPYMMIASSSDDCTVIIWD-LSSLSFVRQLPNFSVPVTVVYINDLTGEI 3381
Query: 658 TSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLK--------EERYLVTGSMDQELRV 813
++ + + W I C + Q+ V + E + VTG L+V
Sbjct: 3382 VTAAGSVLAVWSI-NGDCLSVVNTSQLPTDLIVSVAGSTFSDWLETTWYVTGHQSGALKV 3440
Query: 814 WKL-NWTEDVK 843
W++ + T+ +K
Sbjct: 3441 WRMVHCTDPIK 3451
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 37.5 bits (83), Expect = 0.012
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 8/123 (6%)
Frame = +1
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIV 657
H + +TCL+ + SGS D VI+WD +S VR V S +IN +
Sbjct: 3379 HTAKVTCLRVSQPYMMIASGSDDCTVIIWD-LSSLSFVRQLPDFPVPISAIYINDLTGEI 3437
Query: 658 TSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLK--------EERYLVTGSMDQELRV 813
++ T + W I C Q+ + + + E + VTG ++V
Sbjct: 3438 VTAAGTVLAVWSI-NGDCLAVANTSQLPSDSVLSVTGSTSSDWLETSWYVTGHQSGAVKV 3496
Query: 814 WKL 822
W++
Sbjct: 3497 WRM 3499
Score = 28.3 bits (60), Expect = 7.3
Identities = 26/125 (20%), Positives = 51/125 (40%), Gaps = 9/125 (7%)
Frame = +1
Query: 478 HKS-AITCLQFDDQGHRLVSGSKDTEVILWDVISE----TGKVRFS----GHKGVITSVS 630
H+S I C G +V+G++D V +W V + + ++R H +T +
Sbjct: 3328 HESNQIQCAGVSHDGRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLR 3387
Query: 631 FINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELR 810
I + S D V WD+ + + L + + +A+ + + + + L
Sbjct: 3388 VSQPYMMIASGSDDCTVIIWDLSSLSFVRQLPDFPVPI-SAIYINDLTGEIVTAAGTVLA 3446
Query: 811 VWKLN 825
VW +N
Sbjct: 3447 VWSIN 3451
>At5g54730.1 68418.m06815 expressed protein
Length = 763
Score = 35.9 bits (79), Expect = 0.036
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 334 AQVLPGENVVVTQLAASPTGNHMAVGLFD-GNINVFELTNNEVVCVFAGHKSAITCLQFD 510
++VLP N + L GN G + V ++TN V+ F HKS I+ L FD
Sbjct: 299 SEVLP--NPYIPGLKGIGVGNEKVADAESIGMVIVKDITNKSVITQFKAHKSPISALCFD 356
Query: 511 DQGHRLVSGS 540
G LV+ S
Sbjct: 357 QSGLLLVTAS 366
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 35.9 bits (79), Expect = 0.036
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +1
Query: 379 ASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVI 558
AS + + +A G G +F+L N + + H +T L + H LVS S D +
Sbjct: 420 ASVSPSWIAAGFSSGQCRLFDLRENGFISSWRAHDGYVTKL-VAPESHLLVSSSLDKTLR 478
Query: 559 LWDVISETGKVRF--SGHKGVITSVSFINGKNCIVTS 663
+WD+ F GH ++ S I GK+ I S
Sbjct: 479 IWDLRKSWTPQPFVVKGHNDGVSGFS-IWGKDVISIS 514
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 35.9 bits (79), Expect = 0.036
Identities = 16/87 (18%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +1
Query: 601 GHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLG-GHQMEVWAAVLLKE--E 771
GH+G + ++++ + + +++ S D + W+ ++ ++ GH ++ + E +
Sbjct: 48 GHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSD 107
Query: 772 RYLVTGSMDQELRVWKLNWTEDVKDDD 852
+V+G+ D E+R++ + +DD
Sbjct: 108 ELVVSGAGDAEVRLFNTSRLSGRAEDD 134
Score = 31.5 bits (68), Expect = 0.78
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRF-SGHKGVITSVSFI--NGK 645
GH+ + L ++ G L+SGS D + +W+ S +GH I F+
Sbjct: 48 GHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSD 107
Query: 646 NCIVTSSKDTFVKFWD 693
+V+ + D V+ ++
Sbjct: 108 ELVVSGAGDAEVRLFN 123
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/78 (20%), Positives = 32/78 (41%)
Frame = +1
Query: 391 GNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDV 570
G ++A G DG ++E ++ V G +S + C+Q + + D + +W
Sbjct: 633 GEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWSP 692
Query: 571 ISETGKVRFSGHKGVITS 624
+ + G G T+
Sbjct: 693 TASVPSIVAGGSAGPATA 710
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 35.9 bits (79), Expect = 0.036
Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Frame = +1
Query: 274 YIAVGACEHVIIWDMKLGEKA--QVLPGENVVVTQLAASPTGNHMAV-GLFDGNINVFE- 441
+ +VG +++WD + G +V + + + +P N++ + G D + VF+
Sbjct: 297 FCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDR 356
Query: 442 --LTNNEV---VCVFAGHKSAITCLQFD-DQGHRLVSGSKDTEVILWD 567
LT+N V V F GH++A+ C+Q+ D+ S ++D + +WD
Sbjct: 357 RNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 404
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 35.9 bits (79), Expect = 0.036
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
V + SP G +AV + + + +V+ GHK + G L +G++
Sbjct: 251 VNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQ 310
Query: 544 DTEVILWDV--ISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIET 702
DT LWD+ SE+ V G+ G I + F + + FV +D ++
Sbjct: 311 DTACRLWDIRNPSESFAV-LKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQS 364
Score = 28.3 bits (60), Expect = 7.3
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +1
Query: 523 RLVSGSKDTEVILWDVISETGKVRFSGHKGVI-TSVSFINGKNCIVTSSKDTFVKFWDIE 699
RL++ + D ++ ++D S T F+ V TSVS +V S + + D
Sbjct: 221 RLITANNDCKIRVFDAQSFTRVSEFALDWSVNNTSVSPDGKLLAVVGDSTECLIS--DSH 278
Query: 700 TKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKL 822
+ +L GH+ +A+ L TG+ D R+W +
Sbjct: 279 SGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDI 319
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 35.9 bits (79), Expect = 0.036
Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 21/145 (14%)
Frame = +1
Query: 451 NEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWD--VISETGKVRFS------GH 606
+ +V H SA+ L + G L SG+ D +++W+ + + ++ S GH
Sbjct: 268 HSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGH 327
Query: 607 KGVITSVSFINGKNCIVTSSKDTFVKFW-----DIETKHCFKTLGGHQMEVWA-AVLLKE 768
+ I ++ + + +++ S D ++ W + E C L GH V + AV + +
Sbjct: 328 RKAIMCLAVAS--DLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVSVSD 385
Query: 769 ER-------YLVTGSMDQELRVWKL 822
+ +GS+D L+VW L
Sbjct: 386 SDSNSDYSCMVYSGSLDLSLKVWNL 410
Score = 35.1 bits (77), Expect = 0.063
Identities = 14/71 (19%), Positives = 36/71 (50%)
Frame = +1
Query: 604 HKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLV 783
H ++S++ + + ++S D K W C ++ + A+++ ++ ++
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVY 250
Query: 784 TGSMDQELRVW 816
TGS D++++VW
Sbjct: 251 TGSADKKIKVW 261
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 35.5 bits (78), Expect = 0.048
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
V + SP G +AV D + + + +N + + GH + G +G++
Sbjct: 280 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQ 339
Query: 544 DTEVILWDV--ISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIET 702
D +WD +SE+ V G+ G + S+ F + + + FV +D ++
Sbjct: 340 DKTCRIWDTRKLSESVAV-LKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKS 393
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 35.5 bits (78), Expect = 0.048
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
V + SP G +AV D + + + +N + + GH + G +G++
Sbjct: 274 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQ 333
Query: 544 DTEVILWDV--ISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIET 702
D +WD +SE+ V G+ G + S+ F + + + FV +D ++
Sbjct: 334 DKTCRIWDTRKLSESVAV-LKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKS 387
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 35.5 bits (78), Expect = 0.048
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Frame = +1
Query: 301 VIIWDMKLGEKAQVLPGENVVVT-QLAASPTGNHMAVGLFDGNINVFEL------TNNEV 459
V IWD+ ++P + T LA S TG+ + G DG I +FE+ T+ +
Sbjct: 317 VYIWDVSSETPLAIIPDAHEGTTYSLARSHTGDFLFTGGEDGGIKMFEIRRYGSETSVVL 376
Query: 460 VCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDV 570
+ + H S + L F+ LVS S D ++ L DV
Sbjct: 377 ISQWMPHTSPVYSLSFEFPW--LVSASGDGKLALIDV 411
Score = 35.1 bits (77), Expect = 0.063
Identities = 26/83 (31%), Positives = 39/83 (46%)
Frame = +1
Query: 577 ETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAV 756
E + R GH+G ITS++ I + S D V+ WD + C KTL H VW
Sbjct: 247 EKTEFRLWGHEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVKTL-RHSDWVWG-- 301
Query: 757 LLKEERYLVTGSMDQELRVWKLN 825
L E L + S ++ +W ++
Sbjct: 302 LAPHETTLASTS-GSDVYIWDVS 323
Score = 31.9 bits (69), Expect = 0.59
Identities = 17/73 (23%), Positives = 28/73 (38%)
Frame = +1
Query: 601 GHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYL 780
GH + +V + + TS D+ V+ WD+E + L + + L
Sbjct: 160 GHTEAVRTVFLLASAKLVFTSGYDSIVRMWDME--EGLSIAASKPLGCTIRALAADTKLL 217
Query: 781 VTGSMDQELRVWK 819
V G D + WK
Sbjct: 218 VAGGTDGFIHCWK 230
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 35.5 bits (78), Expect = 0.048
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Frame = +1
Query: 526 LVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNC----IVTSSKDTFVKFW- 690
+++G D +W + GH G I+SV+ +N + + T+SKD ++ +
Sbjct: 124 ILTGCYDGLGRVWSSAGSCSHI-LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFK 182
Query: 691 -------DIETK-HCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
D TK +K L GH+ V + K + + S D + +W N
Sbjct: 183 FDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTN 235
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/111 (17%), Positives = 44/111 (39%)
Frame = +1
Query: 256 NGISGRYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINV 435
+G+ + + G+C H++ ++ + +A + + + FD +V
Sbjct: 130 DGLGRVWSSAGSCSHILEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESV 189
Query: 436 FELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGK 588
T + GHK+++ + G+ + S S D + LW+ T +
Sbjct: 190 DSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNESTSE 240
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Frame = +1
Query: 466 VFAGHKSAITCLQF----DDQGHRLVSGSKDTEVILW-----DVISETGKVR----FSGH 606
+ GH AI+ + D + + + SKD + L+ + + T KVR GH
Sbjct: 145 ILEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGH 204
Query: 607 KGVITSVSFINGKNCIVTSSKDTFVKFWD 693
K + SVS N + +SS D + W+
Sbjct: 205 KASVQSVSAQKSGNMVCSSSWDCTINLWN 233
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 35.5 bits (78), Expect = 0.048
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Frame = +1
Query: 526 LVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNC----IVTSSKDTFVKFW- 690
+++G D +W + GH G I+SV+ +N + + T+SKD ++ +
Sbjct: 124 ILTGCYDGLGRVWSSAGSCSHI-LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFK 182
Query: 691 -------DIETK-HCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
D TK +K L GH+ V + K + + S D + +W N
Sbjct: 183 FDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTN 235
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/111 (17%), Positives = 44/111 (39%)
Frame = +1
Query: 256 NGISGRYIAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINV 435
+G+ + + G+C H++ ++ + +A + + + FD +V
Sbjct: 130 DGLGRVWSSAGSCSHILEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESV 189
Query: 436 FELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGK 588
T + GHK+++ + G+ + S S D + LW+ T +
Sbjct: 190 DSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNESTSE 240
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Frame = +1
Query: 466 VFAGHKSAITCLQF----DDQGHRLVSGSKDTEVILW-----DVISETGKVR----FSGH 606
+ GH AI+ + D + + + SKD + L+ + + T KVR GH
Sbjct: 145 ILEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGH 204
Query: 607 KGVITSVSFINGKNCIVTSSKDTFVKFWD 693
K + SVS N + +SS D + W+
Sbjct: 205 KASVQSVSAQKSGNMVCSSSWDCTINLWN 233
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 35.5 bits (78), Expect = 0.048
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +1
Query: 337 QVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFE----LTNNEVVCVFAGHKSAITCLQ 504
QVL + VT LA + T + G DG +N +E LT+ + GH+ A+ CL
Sbjct: 328 QVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWERQKYLTHKGTI---HGHRMAVLCLA 384
Query: 505 FDDQGHRLVSGSKDTEVILW 564
G L+SG D + +W
Sbjct: 385 --TAGSLLLSGGADKNICVW 402
Score = 32.7 bits (71), Expect = 0.34
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = +1
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFING-KNCI 654
H A++CL ++ L SGS D + +W + H + +V ++G + +
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTV--VSGFDDLV 301
Query: 655 VTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEE 771
T S D +K W E + G V VL+K+E
Sbjct: 302 FTGSADGTLKVWKREVQ------GKEMKHVLVQVLMKQE 334
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = +1
Query: 604 HKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLV 783
H ++ +S + + S D +K W + C +++ H V V+ + +
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAV-NTVVSGFDDLVF 302
Query: 784 TGSMDQELRVWK 819
TGS D L+VWK
Sbjct: 303 TGSADGTLKVWK 314
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 34.7 bits (76), Expect = 0.084
Identities = 27/122 (22%), Positives = 45/122 (36%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
VT LA S +A G D + +++ + E I L F+ G L +
Sbjct: 65 VTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGSLLAAAGD 124
Query: 544 DTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTL 723
D + L + + GHKG +T + F + + V W+++ TL
Sbjct: 125 DEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTL 184
Query: 724 GG 729
G
Sbjct: 185 KG 186
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 34.7 bits (76), Expect = 0.084
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 11/131 (8%)
Frame = +1
Query: 340 VLPGENVVVTQLAASPTGNHMAVGLFDGNINVF---ELTNNEVVCVFAGHKSAITCLQFD 510
V G V +A SPT + D + + N V V H + + C+ ++
Sbjct: 287 VYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWN 346
Query: 511 DQGHRLV-SGSKDTEVILWDVISETGK------VRFSGHKGVITSVSFINGKNCIV-TSS 666
L+ +GS D V L+D T +F GHK + V + K+ + +S+
Sbjct: 347 PHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSA 406
Query: 667 KDTFVKFWDIE 699
+D + WD +
Sbjct: 407 EDGLLNIWDYD 417
Score = 33.9 bits (74), Expect = 0.15
Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Frame = +1
Query: 274 YIAVGACEHVIIWDMKLGEK--AQVLPGENVVVTQLAASPTGNHMAV-GLFDGNINVFE- 441
+ +VG +I+WD + G +V + + + +P +++ + G D + +F+
Sbjct: 308 FCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDR 367
Query: 442 --LTNNEV---VCVFAGHKSAITCLQFD-DQGHRLVSGSKDTEVILWD 567
LT N V + F GHK+A+ C+Q+ D+ S ++D + +WD
Sbjct: 368 RKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 415
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +1
Query: 475 GHKSAITCLQFD---DQGHRLVSGSKDTEVILWD 567
GH SA++C+ F ++G L+SG D V +WD
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +1
Query: 475 GHKSAITCLQFD---DQGHRLVSGSKDTEVILWD 567
GH SA++C+ F ++G L+SG D V +WD
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
>At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat family
protein
Length = 454
Score = 33.5 bits (73), Expect = 0.19
Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Frame = +1
Query: 406 VGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISE-- 579
VG DG VF++ + + ITCL D +SGS V + D + +
Sbjct: 235 VGCEDGTARVFDMYSKTCSQIIRTQGGPITCLSLSD-NQLFLSGSSLGRVTVSDPLMDQP 293
Query: 580 TGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDI 696
++ + G I ++ F G N + +V WD+
Sbjct: 294 VATLKSTITAGGIQTICFNQGTNLAFIGTTGGYVSCWDL 332
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 33.5 bits (73), Expect = 0.19
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Frame = +1
Query: 361 VVTQLAASPTGNHMAVGLFDGNINVFELTN------NEVVCVFAGHKSAITCLQFDD--- 513
++T L SP G ++ D I V +E+ GH ITC F
Sbjct: 157 IITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTPE 216
Query: 514 --QGHRLVSGSKDTEVILWDVIS 576
QG+ L+SGS D+ V LWD+ S
Sbjct: 217 LTQGY-LMSGSGDSTVRLWDITS 238
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 33.1 bits (72), Expect = 0.26
Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 12/128 (9%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKD-----TEVILWDVISETGKVRFSGHKGVITSVSFIN 639
GH + + L D +G+ + S K E+ LW+V + R H +T + F
Sbjct: 598 GHGNELFSLCSDHKGNLVASSCKAQSASMAEIWLWEVGTWKAVGRLQSHSLTVTHLEFSY 657
Query: 640 GKNCIVTSSKDTFVKFWDI------ETKH-CFKTLGGHQMEVWAAVLLKEERYLVTGSMD 798
+++ S+D + I E H + H+ +WA T S D
Sbjct: 658 DDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSWNPFGHQFATSSRD 717
Query: 799 QELRVWKL 822
+ +++W +
Sbjct: 718 KTVKIWSV 725
Score = 31.9 bits (69), Expect = 0.59
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Frame = +1
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVI-SETGKV------RFSGHKGVITSVSFI 636
H +T L+F L+S S+D ++ + ++ G+V + HK +I + S+
Sbjct: 646 HSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSWN 705
Query: 637 NGKNCIVTSSKDTFVKFWDIE 699
+ TSS+D VK W +E
Sbjct: 706 PFGHQFATSSRDKTVKIWSVE 726
Score = 27.9 bits (59), Expect = 9.6
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 7/95 (7%)
Frame = +1
Query: 307 IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFELT---NNEV----VC 465
+W++ + L ++ VT L S + D + +VF + N EV +
Sbjct: 631 LWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMA 690
Query: 466 VFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDV 570
HK I ++ GH+ + S+D V +W V
Sbjct: 691 KVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSV 725
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 32.7 bits (71), Expect = 0.34
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 6/120 (5%)
Frame = +1
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIV 657
H A++CL +++ L SGS D + +W + H I +V+ + +
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVA-AGFDDLLF 306
Query: 658 TSSKDTFVKFWDIE-----TKH-CFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWK 819
T S D +K W E TKH L + V A + + GS D + W+
Sbjct: 307 TGSADGTLKVWKRELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGSSDGTVNFWE 366
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 32.7 bits (71), Expect = 0.34
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +1
Query: 490 ITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVR--FSG--HKGVITSVSFINGKNCIV 657
+T +D G R+ G D + +W + G + G H ITSV F + ++
Sbjct: 330 VTTCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILL 389
Query: 658 TSSKDTFVKFWDI-ETKHCFKTLGG 729
+ S D +K WD+ + K K G
Sbjct: 390 SRSFDGSLKVWDLRQMKEALKVFEG 414
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 475 GHKSAITCLQFDDQGHRLVSGSKDTEVILWD 567
GH ++ L D G R++SGS D V ++D
Sbjct: 175 GHTKIVSSLAVDSAGARVLSGSYDYTVRMYD 205
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 32.7 bits (71), Expect = 0.34
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +1
Query: 541 KDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKT 720
KD I + V+ + + SG I S+I K+ + +S+ + V+ WD+
Sbjct: 518 KDGRDIHYPVVELASRSKLSG----ICWNSYI--KSQVASSNFEGVVQVWDVARNQLVTE 571
Query: 721 LGGHQMEVWAA-VLLKEERYLVTGSMDQELRVWKLN 825
+ H+ VW+ + L +GS D +++W +N
Sbjct: 572 MKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSIN 607
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 32.7 bits (71), Expect = 0.34
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +1
Query: 541 KDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKT 720
KD I + V+ + + SG I S+I K+ + +S+ + V+ WD+
Sbjct: 518 KDGRDIHYPVVELASRSKLSG----ICWNSYI--KSQVASSNFEGVVQVWDVARNQLVTE 571
Query: 721 LGGHQMEVWAA-VLLKEERYLVTGSMDQELRVWKLN 825
+ H+ VW+ + L +GS D +++W +N
Sbjct: 572 MKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSIN 607
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 32.3 bits (70), Expect = 0.45
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +1
Query: 418 DGNINVFELTNNEVVCVFAGHKSAITCLQFDD-QGHRLVSGSKDTEVILWDVISETGKVR 594
D + ++ + +E + F H + +TC+ F+ + +SGS D +V +WDV + V
Sbjct: 342 DETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDV-TRCRVVD 399
Query: 595 FSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDI 696
++ + ++T+V + V S +F+ I
Sbjct: 400 YTDIRDIVTAVCYRPDAKGAVIGSMTGNCRFYHI 433
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 32.3 bits (70), Expect = 0.45
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +1
Query: 418 DGNINVFELTNNEVVCVFAGHKSAITCLQFDD-QGHRLVSGSKDTEVILWDVISETGKVR 594
D + ++ + +E + F H + +TC+ F+ + +SGS D +V +WDV + V
Sbjct: 342 DETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDV-TRCRVVD 399
Query: 595 FSGHKGVITSVSFINGKNCIVTSSKDTFVKFWDI 696
++ + ++T+V + V S +F+ I
Sbjct: 400 YTDIRDIVTAVCYRPDAKGAVIGSMTGNCRFYHI 433
>At1g29320.1 68414.m03584 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to meiotic recombination protein REC14
(GI:11139242) [Homo sapiens]; similar to unknown protein
GI:13623493 [Homo sapiens]
Length = 468
Score = 32.3 bits (70), Expect = 0.45
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +1
Query: 445 TNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKV--RFSGH-KGV 615
T V F ++AIT + D GH + G+ ++ +D+ TGK+ F G G
Sbjct: 247 TQRRPVLSFDFRETAITSIAEDPDGHTIYVGNASADLASFDI--RTGKLLGSFLGKCSGS 304
Query: 616 ITSVSFINGKNCIVTSSKDTFVKFWDIETK 705
I SV I + D +++ +D++T+
Sbjct: 305 IRSVVRHPQHQVIASCGLDRYLRVYDVKTR 334
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 31.5 bits (68), Expect = 0.78
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 484 SAITCLQFDDQGHRLVSGSKDTEVILWDVIS-ETGKVRFSGHKGVITSVSFINGKNCIVT 660
++I+ G L G+ + +V++ D +T ++ H G++T+++F C+V+
Sbjct: 276 NSISAFNVSADGKLLAVGTLEGDVLIIDSTKMQTNQIVKKAHLGLVTALTFSPDSRCLVS 335
Query: 661 SSKDTFVKFWDIETK 705
S D+ + I+ K
Sbjct: 336 VSFDSRARLTVIKQK 350
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 373 LAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVS-GSKDT 549
L+ + G +A G DG + VFE + + + + +++ L F + G LVS G+
Sbjct: 148 LSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHASVKSLTFSESGKFLVSLGAPLC 207
Query: 550 EVILWDVISETGKVRFSGHK 609
V WDV + S K
Sbjct: 208 RV--WDVNASAAIASLSKEK 225
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 31.5 bits (68), Expect = 0.78
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 484 SAITCLQFDDQGHRLVSGSKDTEVILWDVIS-ETGKVRFSGHKGVITSVSFINGKNCIVT 660
++I+ G L G+ + +V++ D +T ++ H G++T+++F C+V+
Sbjct: 276 NSISAFNVSADGKLLAVGTLEGDVLIIDSTKMQTNQIVKKAHLGLVTALTFSPDSRCLVS 335
Query: 661 SSKDTFVKFWDIETK 705
S D+ + I+ K
Sbjct: 336 VSFDSRARLTVIKQK 350
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 373 LAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVS-GSKDT 549
L+ + G +A G DG + VFE + + + + +++ L F + G LVS G+
Sbjct: 148 LSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHASVKSLTFSESGKFLVSLGAPLC 207
Query: 550 EVILWDVISETGKVRFSGHK 609
V WDV + S K
Sbjct: 208 RV--WDVNASAAIASLSKEK 225
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 616 ITSVSF-INGKNCIVTSSKDTFVKFWDIETKH--CFKTLGGHQMEVWAAVLLKEERYLVT 786
++S+S+ I+ N + T S D VK WD+ C T + V++ + +L+
Sbjct: 407 VSSISYNISTPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLA 466
Query: 787 -GSMDQELRVW 816
G EL VW
Sbjct: 467 IGGSKGELHVW 477
>At4g28380.1 68417.m04062 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to extensin-like
protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979
Length = 391
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -3
Query: 570 HIPKNYFC-VL*SRYQTVSLVIKLQASNSRFVSSKYTNYFIVGEFKYINISIKQTNG 403
H+ N FC +L + +SL+ +L SN+RFV + KY+++ + G
Sbjct: 120 HLNSNRFCGILPRSFANLSLLYELDLSNNRFVGPFPDVVLALPSLKYLDLRYNEFEG 176
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Frame = +1
Query: 268 GRYIAVGACEH--VIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINVFE 441
GRY+A + + IWD+ G + G + + L SPTG++ FDG ++E
Sbjct: 224 GRYLASASYDSSSFTIWDVSQGAGTPIRRGLGGI-SMLKWSPTGDYFFAARFDGTFCLWE 282
Query: 442 LT--NNEVVCVFAGHKSAITCLQFDDQGH-RLVSGSKDT 549
+E + +G ++T +D +G L+S SK +
Sbjct: 283 TNTWTSEPWSLSSG-SGSVTGAIWDPEGRFILISFSKSS 320
>At3g55720.1 68416.m06190 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 438
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = +1
Query: 523 RLVSGSKDTEVILWDVISETGKVRFSGHKGV------ITSVSFINGKNCIVTSSKDTFVK 684
R+ +G +D +++LW+ SET + G+ T VS + + + SK T +
Sbjct: 306 RIKTGLEDEDMVLWETTSETLIQDYKSIDGIQIAHRGKTRVSLLRLDESLESHSKTTMEE 365
Query: 685 FWDIE 699
W+IE
Sbjct: 366 SWEIE 370
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); phytochrome
A supressor spa1 (GI:4809171) [Arabidopsis thaliana]
Length = 837
Score = 30.3 bits (65), Expect = 1.8
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 3/147 (2%)
Frame = +1
Query: 394 NHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLV-SGSKDTEVILWDV 570
+ +A FDG + ++++ +++V HK + + L+ SGS D +
Sbjct: 597 SQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGTGV---- 652
Query: 571 ISETGKVRFSGHKGVITSVSF-INGKNCIVTSSKDTFVKFWDIET-KHCFKTLGGHQMEV 744
G ++ K + V F + + S D V ++D+ K T+ GH V
Sbjct: 653 --SIGTIK---TKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTV 707
Query: 745 WAAVLLKEERYLVTGSMDQELRVWKLN 825
+ V + LV+ S D L++W L+
Sbjct: 708 -SYVKFVDSSTLVSSSTDNTLKLWDLS 733
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Frame = +1
Query: 364 VTQLAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSK 543
V +++S + + G DG + + + ++ F ++ L G LV+ S
Sbjct: 119 VNAVSSSAKASCIYSGGADGMVCQIDPHSGNLIRKFKASTKTVSSLCVSPDGKILVTAST 178
Query: 544 DTEVILWDVISETGKVRFSGHKGVITSVSFI-NGKNCIVTSSKDTFVKFW 690
+ + + K F+GH GV+ V+F +GK + ++ + ++ W
Sbjct: 179 QLKTFNCSDLKKIQK--FTGHPGVVRCVAFTEDGKYVLSSAVGERYIAVW 226
>At5g05570.1 68418.m00605 transducin family protein / WD-40 repeat
family protein similar to unknown protein (pir||T04661);
contains Pfam PF00400: WD domain, G-beta repeat (4
copies, 2 weak)|8683726|gb|AV524198.1|AV524198
Length = 1124
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 373 LAASPTGNHMAVGLFDGNINVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTE 552
LA P +AVG DG I V N E + + + + L+F LVS S + E
Sbjct: 50 LAFDPIQCLLAVGTLDGRIKVIGGDNIEAI-LASPKQLPFKNLEFMQNQGFLVSISNENE 108
Query: 553 VILWDV 570
+ +WD+
Sbjct: 109 IQVWDL 114
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 29.5 bits (63), Expect = 3.1
Identities = 26/109 (23%), Positives = 44/109 (40%)
Frame = +1
Query: 490 ITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVRFSGHKGVITSVSFINGKNCIVTSSK 669
I+ L+F + L+ S D V L+D + + F H G + F + + +
Sbjct: 19 ISNLRFSNNSDHLLVSSWDKSVRLYDANGDLMRGEFK-HGGAVLDCCFHDDSSGFSVCA- 76
Query: 670 DTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVW 816
DT V+ D LG H+ V ++TGS D+ ++ W
Sbjct: 77 DTKVRRIDFNAGK-EDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCW 124
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 478 HKSAITCLQFDDQGHRLVSGSKDTEVILWDV 570
H+ + LQ+ L+SGS D I+WDV
Sbjct: 52 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDV 82
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 715 KTLGGHQMEVWAAVLLKEERYLVTGSMDQELRVWKLN 825
K+L H+ +V ++ YL++GS+D +W +N
Sbjct: 47 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVN 83
>At3g01550.1 68416.m00085 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower]{Brassica
oleracea}
Length = 383
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 277 IAVGACEHVIIWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGNINV 435
+ G I+W +KL + + P + V+ QLA + T ++ + G +NV
Sbjct: 115 LGCGTLMIAIMWLLKLHPRPKFSPSQFTVIVQLAVAHTLGNLLTNVSLGRVNV 167
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 29.1 bits (62), Expect = 4.2
Identities = 30/194 (15%), Positives = 74/194 (38%), Gaps = 3/194 (1%)
Frame = +1
Query: 250 TLNGISGRYIAVGACEHVI-IWDMKLGEKAQVLPGENVVVTQLAASPTGNHMAVGLFDGN 426
TL ++ IA G + + IWD + + ++ + + + V DG
Sbjct: 42 TLINVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGT 101
Query: 427 INVFELTNNEVVCVFAGHKSAITCLQFDDQGHRLVSGSKDTEVIL--WDVISETGKVRFS 600
++V L ++V + + + G +++ G+++ ++L W + RF
Sbjct: 102 LSVCNLRTSKVQSQSEFSEDELLSVVIMKNGRKVICGTQNGTLLLYSWGFFKDCSD-RFV 160
Query: 601 GHKGVITSVSFINGKNCIVTSSKDTFVKFWDIETKHCFKTLGGHQMEVWAAVLLKEERYL 780
++ ++T + + I + +G H + L ++++L
Sbjct: 161 DLAPNSVDALLKLDEDRLITGCDNGIISLVGILPNRIIQPIGSHDYPIEDLALSHDKKFL 220
Query: 781 VTGSMDQELRVWKL 822
+ + D L++W L
Sbjct: 221 GSTAHDSMLKLWNL 234
>At5g23630.1 68418.m02771 ATPase E1-E2 type family protein /
haloacid dehalogenase-like hydrolase familiy protein
similar to SP|O14072 Cation-transporting ATPase 4 (EC
3.6.3.-) {Schizosaccharomyces pombe}; contains InterPro
accession IPR001757: ATPase, E1-E2 type; contains Pfam
profile PF00702: haloacid dehalogenase-like hydrolase
Length = 1179
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -1
Query: 554 TSVSFDPDTKRCPWSSNCKQVIADLCPANTQTTSLLVSSNTLIFPSNK 411
T S D + + SNC++ D+ +T +L S + L+F NK
Sbjct: 495 TLTSDDMEFRGVGGLSNCEEAETDMSKVPVRTLEILASCHALVFVENK 542
>At4g20380.3 68417.m02976 zinc finger protein (LSD1) identical to
zinc-finger protein Lsd1 [Arabidopsis thaliana]
gi|1872521|gb|AAC49660
Length = 184
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = -1
Query: 371 CVTTTFSPG--NTCAFSPSFMSQIITCSHAPTAMYLPLIPFNVTCVLLQ 231
C TT P N A +PS I C H T + P +V C + Q
Sbjct: 69 CQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASSVKCAVCQ 117
>At4g20380.2 68417.m02974 zinc finger protein (LSD1) identical to
zinc-finger protein Lsd1 [Arabidopsis thaliana]
gi|1872521|gb|AAC49660
Length = 189
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = -1
Query: 371 CVTTTFSPG--NTCAFSPSFMSQIITCSHAPTAMYLPLIPFNVTCVLLQ 231
C TT P N A +PS I C H T + P +V C + Q
Sbjct: 74 CQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASSVKCAVCQ 122
>At4g20380.1 68417.m02975 zinc finger protein (LSD1) identical to
zinc-finger protein Lsd1 [Arabidopsis thaliana]
gi|1872521|gb|AAC49660
Length = 184
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = -1
Query: 371 CVTTTFSPG--NTCAFSPSFMSQIITCSHAPTAMYLPLIPFNVTCVLLQ 231
C TT P N A +PS I C H T + P +V C + Q
Sbjct: 69 CQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASSVKCAVCQ 117
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 604 HKGVITSVSFINGKNCIVTSSKDTFVKFWD 693
H G +T ++ I + +T SKD VK WD
Sbjct: 2374 HLGSVTKIATIPRTSLFLTGSKDGEVKLWD 2403
>At1g17680.2 68414.m02189 transcription factor-related low
similarity to SP|P33339 Transcription factor tau 131 kDa
subunit (TFIIIC 131 kDa subunit) Saccharomyces
cerevisiae, transcription factor IIIC102 short isoform
[Homo sapiens] GI:18481637
Length = 896
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -3
Query: 372 LCYNYILSRQHLCLFTKFHVPNNNMFTCSNSDVSTTNTIQCY 247
L + L +H CL F NN+ CSNS + N + Y
Sbjct: 777 LALGFRLKNRHECLAQGFAFLYNNLRICSNSQEALYNVARAY 818
>At1g17680.1 68414.m02188 transcription factor-related low
similarity to SP|P33339 Transcription factor tau 131 kDa
subunit (TFIIIC 131 kDa subunit) Saccharomyces
cerevisiae, transcription factor IIIC102 short isoform
[Homo sapiens] GI:18481637
Length = 896
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -3
Query: 372 LCYNYILSRQHLCLFTKFHVPNNNMFTCSNSDVSTTNTIQCY 247
L + L +H CL F NN+ CSNS + N + Y
Sbjct: 777 LALGFRLKNRHECLAQGFAFLYNNLRICSNSQEALYNVARAY 818
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +1
Query: 466 VFAGHKSAITCLQFDDQGHRLVSGSKDTEVILWDVISETGKVR 594
+ H A+ C+++ ++++GS D V WD +G R
Sbjct: 93 ILGTHDKAVRCVEYSYAAGQVITGSWDKTVKCWDPRGASGPER 135
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 27.9 bits (59), Expect = 9.6
Identities = 23/111 (20%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Frame = +1
Query: 274 YIAVGACEHVIIWDMKLGEKAQVL---PGENVVVTQLAASPTG-NHMAVGLFDGN-INVF 438
+ +V A V I+D++ E + ++ P + + +LA + +MA L D N + +
Sbjct: 189 FASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 248
Query: 439 ELTNNEV-VCVFAGHKSAITCLQFDDQGHR-LVSGSKDTEVILWDVISETG 585
++ + + V H++++ + + Q + + SG DT+ ++W++ + G
Sbjct: 249 DIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAG 299
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 27.9 bits (59), Expect = 9.6
Identities = 23/111 (20%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Frame = +1
Query: 274 YIAVGACEHVIIWDMKLGEKAQVL---PGENVVVTQLAASPTG-NHMAVGLFDGN-INVF 438
+ +V A V I+D++ E + ++ P + + +LA + +MA L D N + +
Sbjct: 189 FASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 248
Query: 439 ELTNNEV-VCVFAGHKSAITCLQFDDQGHR-LVSGSKDTEVILWDVISETG 585
++ + + V H++++ + + Q + + SG DT+ ++W++ + G
Sbjct: 249 DIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAG 299
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 27.9 bits (59), Expect = 9.6
Identities = 23/111 (20%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Frame = +1
Query: 274 YIAVGACEHVIIWDMKLGEKAQVL---PGENVVVTQLAASPTG-NHMAVGLFDGN-INVF 438
+ +V A V I+D++ E + ++ P + + +LA + +MA L D N + +
Sbjct: 189 FASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 248
Query: 439 ELTNNEV-VCVFAGHKSAITCLQFDDQGHR-LVSGSKDTEVILWDVISETG 585
++ + + V H++++ + + Q + + SG DT+ ++W++ + G
Sbjct: 249 DIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAG 299
>At2g22770.1 68415.m02701 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 314
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -1
Query: 713 KQCLVSISQNLTNVSFDEVTMQFFPFINDTLVITPLWPLN--LTLPVSDI 570
K C++ I +L + V PF N TLVIT L ++ + PV ++
Sbjct: 255 KGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVITILTKMDNKFSRPVEEV 304
>At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containing
protein ESTs gb|F20110 and gb|F20109 come from this
gene; contains Pfam profile PF00515: TPR Domain
Length = 1558
Score = 27.9 bits (59), Expect = 9.6
Identities = 9/39 (23%), Positives = 24/39 (61%)
Frame = +3
Query: 537 IKGHRSNSLGCDIRNR*SKVQWPQRCYHKCVIYKWKKLH 653
++ HR +S+G + N+ +++ W ++C+I + K++
Sbjct: 501 VEFHRPHSVGTSVENQPTQLDWDDLESYRCIIQELVKIN 539
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,533,000
Number of Sequences: 28952
Number of extensions: 441733
Number of successful extensions: 2234
Number of sequences better than 10.0: 227
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1896
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2100696768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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