Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_H03
(1034 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.009
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 35 0.022
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.029
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.46
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.61
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.61
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 29 0.81
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 3.3
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.009
Identities = 23/64 (35%), Positives = 23/64 (35%), Gaps = 4/64 (6%)
Frame = +3
Query: 735 KXXXPPPPXXXXPNKXXXP----PPPKXXGGXPPPRXPXKKIXNXXPPPXXXXPXGAPPX 902
K PPPP P P PP GG PPP PPP G PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP-----------PPPPGVAGAGPPPP 778
Query: 903 FPPP 914
PPP
Sbjct: 779 PPPP 782
Score = 31.5 bits (68), Expect = 0.20
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 5/72 (6%)
Frame = +1
Query: 820 PPPGXLXKKXKTXXP---PPXXXXPXGXPPXSPPXXXXPXKXXPPFFPPXGKXXGG--XX 984
PPP + P PP G PP PP PP PP GG
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYY 793
Query: 985 KPTPXGXPPPXV 1020
P P P P +
Sbjct: 794 APAPQAEPEPKI 805
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 34.7 bits (76), Expect = 0.022
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = +3
Query: 747 PPPPXXXXPNKXXXPPPPKXXGG--XPPPRXPXKKIXNXXPPPXXXXPXGAPPXFPPP 914
PPPP P + PPP G PPP + + PPP P P PPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP--PPP 263
Score = 34.7 bits (76), Expect = 0.022
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = +3
Query: 747 PPPPXXXXPNKXXXPPPPKXXGG--XPPPRXPXKKIXNXXPPPXXXXPXGAPPXFPPP 914
PPPP P + PPP G PPP + + PPP P P PPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP--PPP 289
Score = 34.7 bits (76), Expect = 0.022
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = +3
Query: 747 PPPPXXXXPNKXXXPPPPKXXGG--XPPPRXPXKKIXNXXPPPXXXXPXGAPPXFPPP 914
PPPP P + PPP G PPP + + PPP P P PPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP--PPP 315
Score = 34.7 bits (76), Expect = 0.022
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = +3
Query: 747 PPPPXXXXPNKXXXPPPPKXXGG--XPPPRXPXKKIXNXXPPPXXXXPXGAPPXFPPP 914
PPPP P + PPP G PPP + + PPP P P PPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP--PPP 341
Score = 30.7 bits (66), Expect = 0.35
Identities = 19/67 (28%), Positives = 21/67 (31%)
Frame = +1
Query: 811 GXXPPPGXLXKKXKTXXPPPXXXXPXGXPPXSPPXXXXPXKXXPPFFPPXGKXXGGXXKP 990
G PP + K PPP G PP P + PP PP G P
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP--PPMHHEPGEHMPP 261
Query: 991 TPXGXPP 1011
P P
Sbjct: 262 PPMHHEP 268
Score = 29.9 bits (64), Expect = 0.61
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +3
Query: 747 PPPPXXXXPNKXXXPPPPKXXGGXPPPRXPXK-KIXNXXPPPXXXXPXGAPPXFPPP 914
PPPP P + PPP G P P + PPP G PPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG--EHMPPP 275
Score = 29.9 bits (64), Expect = 0.61
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +3
Query: 747 PPPPXXXXPNKXXXPPPPKXXGGXPPPRXPXK-KIXNXXPPPXXXXPXGAPPXFPPP 914
PPPP P + PPP G P P + PPP G PPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG--EHMPPP 301
Score = 29.9 bits (64), Expect = 0.61
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +3
Query: 747 PPPPXXXXPNKXXXPPPPKXXGGXPPPRXPXK-KIXNXXPPPXXXXPXGAPPXFPPP 914
PPPP P + PPP G P P + PPP G PPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG--EHMPPP 327
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/67 (26%), Positives = 21/67 (31%)
Frame = +1
Query: 811 GXXPPPGXLXKKXKTXXPPPXXXXPXGXPPXSPPXXXXPXKXXPPFFPPXGKXXGGXXKP 990
G PP + + PPP G PP P + PP PP G P
Sbjct: 230 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP--PPMHHEPGEHMPP 287
Query: 991 TPXGXPP 1011
P P
Sbjct: 288 PPMHHEP 294
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/67 (26%), Positives = 21/67 (31%)
Frame = +1
Query: 811 GXXPPPGXLXKKXKTXXPPPXXXXPXGXPPXSPPXXXXPXKXXPPFFPPXGKXXGGXXKP 990
G PP + + PPP G PP P + PP PP G P
Sbjct: 256 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP--PPMHHEPGEHMPP 313
Query: 991 TPXGXPP 1011
P P
Sbjct: 314 PPMHHEP 320
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/62 (27%), Positives = 20/62 (32%)
Frame = +1
Query: 811 GXXPPPGXLXKKXKTXXPPPXXXXPXGXPPXSPPXXXXPXKXXPPFFPPXGKXXGGXXKP 990
G PP + + PPP G PP P + PP PP G P
Sbjct: 282 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP--PPMHHEPGEHMPP 339
Query: 991 TP 996
P
Sbjct: 340 PP 341
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 747 PPPPXXXXPNKXXXPPPPKXXGGXPPPRXPXK 842
PPPP P + PPP G P P K
Sbjct: 312 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPFK 343
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.029
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +3
Query: 747 PPPPXXXXPNKXXXPPPPKXXGGXPPPRXPXKKIXNXXPPPXXXXPXGAPPXFPPP 914
PPPP P PP+ PPP PPP + P PPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 29.5 bits (63), Expect = 0.81
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Frame = +3
Query: 771 PNKXXXPP-PPKXXGGXPPPRXPXKKIXNXXP-PPXXXXPXGAPPXFPP 911
P PP PP PP R P P PP +PP PP
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPP 272
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Frame = +3
Query: 789 PPPPKXX---GGXPPPRXPXKKIXNXXPPPXXXXPXGAPPXFPP 911
PPPP+ G PPP + + N P P P + P PP
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSN-PPAPPPAIPGRSAPALPP 405
Score = 28.3 bits (60), Expect = 1.9
Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 5/61 (8%)
Frame = +3
Query: 747 PPPPXXXXPNKXXXPPPPKXXGG-----XPPPRXPXKKIXNXXPPPXXXXPXGAPPXFPP 911
PPPP P+ PPP PPP P + PP PP P
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP-ALPPLGNASRTSTPPVPTP 420
Query: 912 P 914
P
Sbjct: 421 P 421
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 3/58 (5%)
Frame = +3
Query: 747 PPPPXXXXPNKXXXPPPPKXXGGXPPPRXPXKKIXNXXPPP---XXXXPXGAPPXFPP 911
PPP PPP G P P PP P APP PP
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Score = 26.2 bits (55), Expect = 7.6
Identities = 16/59 (27%), Positives = 18/59 (30%)
Frame = +3
Query: 735 KXXXPPPPXXXXPNKXXXPPPPKXXGGXPPPRXPXKKIXNXXPPPXXXXPXGAPPXFPP 911
K PPPP N+ P PP P + P APP PP
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.46
Identities = 17/68 (25%), Positives = 19/68 (27%)
Frame = +1
Query: 811 GXXPPPGXLXKKXKTXXPPPXXXXPXGXPPXSPPXXXXPXKXXPPFFPPXGKXXGGXXKP 990
G P + K + PP P PP P PP P P
Sbjct: 107 GGMPKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP 166
Query: 991 TPXGXPPP 1014
P PPP
Sbjct: 167 IPSSLPPP 174
Score = 29.9 bits (64), Expect = 0.61
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 3/59 (5%)
Frame = +3
Query: 747 PPPPXXXXPNKXXXPPPPKXXGGXPPPRXPXKKIXNXXPPPXXXXPXGA---PPXFPPP 914
PP P P PP P PPP P + + PP P PP PPP
Sbjct: 151 PPSPASAPPIPSKAPPIP---SSLPPPAQPAAPVKS--PPSAPSLPSAVPPMPPKVPPP 204
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.61
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +3
Query: 747 PPPPXXXXPNKXXXPPPPKXXGGXPPPRXPXKKIXNXXPP 866
PPPP P PP P PPP P + P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.1 bits (57), Expect = 4.3
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 853 TXXPPPXXXXPXGXPPXSPPXXXXPXKXXPPFFP 954
T PPP P PP +PP P PP P
Sbjct: 1706 TPPPPPMSVPP---PPSAPPMPAGPPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 10.0
Identities = 14/56 (25%), Positives = 16/56 (28%)
Frame = +3
Query: 747 PPPPXXXXPNKXXXPPPPKXXGGXPPPRXPXKKIXNXXPPPXXXXPXGAPPXFPPP 914
P P P + P PP PPP P P + P P P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.61
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = +1
Query: 865 PPXXXXPXGXPPXSPPXXXXPXKXXPPFFPPXGKXXGGXXKPTP-XGXPPPXVXXAR 1032
PP G PP PP P PP PTP G PP V A+
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAK 1235
Score = 28.3 bits (60), Expect = 1.9
Identities = 18/66 (27%), Positives = 18/66 (27%), Gaps = 1/66 (1%)
Frame = +1
Query: 820 PPPGXLXKKXKTXXPPPXXXXPXGXPPXSPPXXXXPXKXXPPF-FPPXGKXXGGXXKPTP 996
P P K P P G PP P P P PP K G P
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Query: 997 XGXPPP 1014
PP
Sbjct: 1194 PSEAPP 1199
Score = 27.9 bits (59), Expect = 2.5
Identities = 18/66 (27%), Positives = 18/66 (27%), Gaps = 1/66 (1%)
Frame = +1
Query: 820 PPPGXLXKKXKTXXPPPXXXXPXGXPPXSPPXXXXPXKXXPPFFPPXGK-XXGGXXKPTP 996
P P K P P G PP P P P PP K P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 997 XGXPPP 1014
PP
Sbjct: 1175 SSGIPP 1180
Score = 27.9 bits (59), Expect = 2.5
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 865 PPXXXXPXGXPPXSPPXXXXPXKXXPPFFPPXGKXXGGXXKPTPXGXPPP 1014
PP G PP P P P PP K G P PP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 26.6 bits (56), Expect = 5.7
Identities = 17/57 (29%), Positives = 17/57 (29%), Gaps = 3/57 (5%)
Frame = +3
Query: 750 PPPXXXXPNKXXXPPPPKXXGGXP---PPRXPXKKIXNXXPPPXXXXPXGAPPXFPP 911
P P PP PK G P PP P P P AP PP
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Score = 26.6 bits (56), Expect = 5.7
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +3
Query: 771 PNKXXXPPPPKXXGGXPPPRXPXKKIXNXXPPPXXXXPXGAPPXFPPP 914
P PP PK PP P I P P P PP PP
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIP-PVPKPAAGVPPVPPPSEAPP 1199
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 29.5 bits (63), Expect = 0.81
Identities = 21/74 (28%), Positives = 25/74 (33%), Gaps = 7/74 (9%)
Frame = +3
Query: 714 PXQXXXQKXXXPPP----PXXXXPNKXXXPPPPKXXGGXPP--PRXPXKKIX-NXXPPPX 872
P Q PPP P P P P PP P P ++ N P P
Sbjct: 144 PLPVSCQPVLRPPPVPQVPSHWYPVSLPSPNLPHQPISKPPVIPNLPKLQVHPNRLPHPI 203
Query: 873 XXXPXGAPPXFPPP 914
P +P +PPP
Sbjct: 204 HNHPYSSPTSYPPP 217
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 3.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 747 PPPPXXXXPNKXXXPPPP 800
PPPP P++ PPPP
Sbjct: 13 PPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 10.0
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 747 PPPPXXXXPNKXXXPPPP 800
PPPP P PPPP
Sbjct: 12 PPPPPGFEPPSQPPPPPP 29
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,570,908
Number of Sequences: 5004
Number of extensions: 39530
Number of successful extensions: 227
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 541237406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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