Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_H03
         (1034 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.92 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   6.5  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   8.5  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   8.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 0.92
 Identities = 12/39 (30%), Positives = 12/39 (30%)
 Frame = +3

Query: 798 PKXXGGXPPPRXPXKKIXNXXPPPXXXXPXGAPPXFPPP 914
           P      PPP  P        P P    P G P    PP
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 6.5
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -2

Query: 913 GGGXXGGAPXGXXFXGGG 860
           GGG  GGAP G     GG
Sbjct: 204 GGGSGGGAPGGGGGSSGG 221



 Score = 23.8 bits (49), Expect = 8.5
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -2

Query: 925 GXPXGGGXXGGAPXGXXFXGGG 860
           G P GGG   G P      GGG
Sbjct: 210 GAPGGGGGSSGGPGPGGGGGGG 231


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 8.5
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -3

Query: 537 PXRTGGGXEGXXGXXGPGXGPPNMXXXFLP 448
           P R GGG  G  G  GP     N+    +P
Sbjct: 10  PLRAGGGGGGGGGGGGPSGMYDNISNDGIP 39


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.8 bits (49), Expect = 8.5
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 444 GWXXSXXQXXPPHP 403
           GW  S  Q  PPHP
Sbjct: 26  GWYPSNYQHQPPHP 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,777
Number of Sequences: 2352
Number of extensions: 15472
Number of successful extensions: 40
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 114696621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)