Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G24
         (898 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     27   0.15 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   1.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   4.3  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   5.7  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   5.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.9  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
 Frame = -2

Query: 456 TVRGLATTPAWSTCSIGS----MYLQLLARSRCCPRRDCXGESKPFSLNSFIASSREHLP 289
           T+  +A +  W  C         +L+ L   RC P R    + K   L+    S  +H P
Sbjct: 153 TMEAIARSGIWENCRAAYEDIVKHLERLREERCDPDRPLPLDQKARDLSPRNGSPTDHSP 212

Query: 288 IIRLA 274
           ++ L+
Sbjct: 213 VLNLS 217


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = +3

Query: 441 PAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQPTEEQLRVLSSLP 596
           PAP  SP V  PGS  TS  S   + +  + P     V      LR L   P
Sbjct: 92  PAPLASPLVQEPGSSTTSATSGAVMASPPM-PITTDNVAAISGVLRSLLDRP 142


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 308 DAMKEFRLNGLDSPXQSRRG 367
           D ++EF+ NGLD   +  RG
Sbjct: 625 DFLREFQFNGLDVDWEYPRG 644


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 441 PAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPAA 545
           PAP+ S   P+  S  TS  ++PP    +   PA+
Sbjct: 13  PAPQ-SAATPISSSGMTSPAAAPPPATTSSGSPAS 46


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 210 AKIFHFVQICLPIGMPPSHP 269
           A IFH     LP+  PP  P
Sbjct: 148 ASIFHAAATSLPLHYPPPPP 167


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -3

Query: 353 VXENPSRSV*TPSSRHPESIYR 288
           V ++PS +  +P  R PES+++
Sbjct: 281 VLQSPSSTSSSPEPRSPESLFK 302


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 346 SXTIPTRTTSGAREQLQIHRPNGTRTP 426
           S + PT        Q+Q +RP G  TP
Sbjct: 230 SASPPTVNIKKESPQMQSYRPTGNITP 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,401
Number of Sequences: 336
Number of extensions: 4193
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)