Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_G24
(898 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL157788-3|CAI14719.1| 84|Homo sapiens nanos homolog 1 (Drosop... 38 0.065
AL157788-2|CAI14718.1| 292|Homo sapiens nanos homolog 1 (Drosop... 38 0.065
AF458985-1|AAQ04765.1| 292|Homo sapiens EC_Rep1a protein. 38 0.065
AF275269-1|AAL36982.2| 292|Homo sapiens NANOS1 protein. 38 0.065
BC101210-1|AAI01211.1| 192|Homo sapiens NANOS3 protein protein. 37 0.086
BC101209-1|AAI01210.1| 192|Homo sapiens NANOS3 protein protein. 37 0.086
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 37 0.11
BC117486-1|AAI17487.1| 138|Homo sapiens nanos homolog 2 (Drosop... 36 0.26
BC117484-1|AAI17485.1| 138|Homo sapiens nanos homolog 2 (Drosop... 36 0.26
BC042883-1|AAH42883.1| 138|Homo sapiens nanos homolog 2 (Drosop... 36 0.26
X96753-1|CAA65529.1| 2322|Homo sapiens melanoma-associated chond... 33 1.9
AY359468-1|AAQ62842.1| 2322|Homo sapiens melanoma chondroitin su... 33 1.9
BC085610-1|AAH85610.1| 578|Homo sapiens ZFHX4 protein protein. 32 2.5
BC008965-1|AAH08965.2| 837|Homo sapiens BAZ2A protein protein. 32 2.5
AK131462-1|BAD18607.1| 1103|Homo sapiens protein ( Homo sapiens ... 32 2.5
AK131399-1|BAD18546.1| 907|Homo sapiens protein ( Homo sapiens ... 32 2.5
AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain... 32 2.5
AB002312-1|BAA20773.2| 1899|Homo sapiens KIAA0314 protein protein. 32 2.5
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 32 3.2
AK000468-1|BAA91185.1| 326|Homo sapiens protein ( Homo sapiens ... 32 3.2
AF462153-1|AAL59618.2| 388|Homo sapiens C21orf55 protein protein. 32 3.2
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 32 3.2
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein. 32 3.2
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 32 3.2
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 32 3.2
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 32 3.2
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 32 3.2
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 32 3.2
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 32 3.2
M63959-1|AAA51553.1| 357|Homo sapiens alpha-2-macroglobulin rec... 31 5.7
BC119707-1|AAI19708.1| 106|Homo sapiens late cornified envelope... 31 5.7
BC112067-1|AAI12068.1| 357|Homo sapiens low density lipoprotein... 31 5.7
BC105074-1|AAI05075.1| 357|Homo sapiens low density lipoprotein... 31 5.7
BC047712-1|AAH47712.1| 244|Homo sapiens coiled-coil domain cont... 31 5.7
AY189289-1|AAO86733.1| 137|Homo sapiens LP9167 protein protein. 31 5.7
AL590235-1|CAM21451.1| 357|Homo sapiens low density lipoprotein... 31 5.7
AL139247-7|CAI21685.1| 106|Homo sapiens late cornified envelope... 31 5.7
AK222504-1|BAD96224.1| 357|Homo sapiens low density lipoprotein... 31 5.7
AK075133-1|BAC11424.1| 244|Homo sapiens protein ( Homo sapiens ... 31 5.7
AK074137-1|BAB84963.1| 161|Homo sapiens FLJ00210 protein protein. 31 5.7
AF035767-1|AAC67373.1| 357|Homo sapiens lipoprotein receptor as... 31 5.7
U40215-1|AAC50718.1| 478|Homo sapiens synapsin IIb protein. 31 7.5
U46194-2|AAB38087.1| 187|Homo sapiens protein ( Human renal cel... 30 9.9
L39059-1|AAA62861.1| 869|Homo sapiens transcription factor SL1 ... 30 9.9
BC028131-1|AAH28131.1| 775|Homo sapiens TATA box binding protei... 30 9.9
AY158985-1|AAN38818.1| 869|Homo sapiens TATA box binding protei... 30 9.9
AK222527-1|BAD96247.1| 357|Homo sapiens low density lipoprotein... 30 9.9
AK097404-1|BAC05037.1| 416|Homo sapiens protein ( Homo sapiens ... 30 9.9
AF110334-1|AAD28183.1| 1246|Homo sapiens APC2 protein protein. 30 9.9
AB209594-1|BAD92831.1| 456|Homo sapiens TBP-associated factor 1... 30 9.9
>AL157788-3|CAI14719.1| 84|Homo sapiens nanos homolog 1
(Drosophila) protein.
Length = 84
Score = 37.5 bits (83), Expect = 0.065
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +1
Query: 754 PPGRVACPVLXAFVCARCXARGDPXXTAKXWP 849
P GRV CPVL + C C A GD T K P
Sbjct: 27 PDGRVLCPVLRRYTCPLCGASGDNAHTIKYCP 58
>AL157788-2|CAI14718.1| 292|Homo sapiens nanos homolog 1
(Drosophila) protein.
Length = 292
Score = 37.5 bits (83), Expect = 0.065
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +1
Query: 754 PPGRVACPVLXAFVCARCXARGDPXXTAKXWP 849
P GRV CPVL + C C A GD T K P
Sbjct: 235 PDGRVLCPVLRRYTCPLCGASGDNAHTIKYCP 266
>AF458985-1|AAQ04765.1| 292|Homo sapiens EC_Rep1a protein.
Length = 292
Score = 37.5 bits (83), Expect = 0.065
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +1
Query: 754 PPGRVACPVLXAFVCARCXARGDPXXTAKXWP 849
P GRV CPVL + C C A GD T K P
Sbjct: 235 PDGRVLCPVLRRYTCPLCGASGDNAHTIKYCP 266
>AF275269-1|AAL36982.2| 292|Homo sapiens NANOS1 protein.
Length = 292
Score = 37.5 bits (83), Expect = 0.065
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +1
Query: 754 PPGRVACPVLXAFVCARCXARGDPXXTAKXWP 849
P GRV CPVL + C C A GD T K P
Sbjct: 235 PDGRVLCPVLRRYTCPLCGASGDNAHTIKYCP 266
>BC101210-1|AAI01211.1| 192|Homo sapiens NANOS3 protein protein.
Length = 192
Score = 37.1 bits (82), Expect = 0.086
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 648 DATRTNESXMCAQE-CRFCKNNGERAAYYRSHALRD 752
D R+ ES + C FCK+NGE A Y+SH L+D
Sbjct: 62 DQKRSLESSPAPERLCSFCKHNGESRAIYQSHVLKD 97
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 760 GRVACPVLXAFVCARCXARGDPXXTAKXWP 849
GRV CP+L +VC +C A + T + P
Sbjct: 100 GRVLCPILRDYVCPQCGATRERAHTRRFCP 129
>BC101209-1|AAI01210.1| 192|Homo sapiens NANOS3 protein protein.
Length = 192
Score = 37.1 bits (82), Expect = 0.086
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 648 DATRTNESXMCAQE-CRFCKNNGERAAYYRSHALRD 752
D R+ ES + C FCK+NGE A Y+SH L+D
Sbjct: 62 DQKRSLESSPAPERLCSFCKHNGESRAIYQSHVLKD 97
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 760 GRVACPVLXAFVCARCXARGDPXXTAKXWP 849
GRV CP+L +VC +C A + T + P
Sbjct: 100 GRVLCPILRDYVCPQCGATRERAHTRRFCP 129
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +3
Query: 429 QVSWPAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQPTEEQLRVLSSLPDAV 605
Q+ P E P +P P S LS PP + T PP AS++ P E+L S LP+A+
Sbjct: 429 QLEAPLNEEMPLLPPPEE---SPLSPPPEESPTSPPPEASRLSPPPEELPA-SPLPEAL 483
Score = 31.9 bits (69), Expect = 3.2
Identities = 22/52 (42%), Positives = 25/52 (48%)
Frame = +3
Query: 441 PAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQPTEEQLRVLSSLP 596
P PE SP P P + S LS PP + PP S + P E R LS LP
Sbjct: 610 PPPEESPLSPPPEA---SRLSPPPEDSPMSPPPEESPMSPPPEVSR-LSPLP 657
Score = 30.3 bits (65), Expect = 9.9
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = +3
Query: 441 PAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQPTEEQ 572
P PE SP P P S LS PP T PP AS++ P E+
Sbjct: 538 PPPEASPLSP-PFEE--SPLSPPPEELPTSPPPEASRLSPPPEE 578
>BC117486-1|AAI17487.1| 138|Homo sapiens nanos homolog 2
(Drosophila) protein.
Length = 138
Score = 35.5 bits (78), Expect = 0.26
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 754 PPGRVACPVLXAFVCARCXARGDPXXTAKXWP 849
P G V CP+L +VC C A GD T K P
Sbjct: 84 PDGVVVCPILRHYVCPVCGATGDQAHTLKYCP 115
Score = 30.3 bits (65), Expect = 9.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 690 CRFCKNNGERAAYYRSHALR 749
C FCK+NGE Y SH L+
Sbjct: 63 CNFCKHNGESRHVYSSHQLK 82
>BC117484-1|AAI17485.1| 138|Homo sapiens nanos homolog 2
(Drosophila) protein.
Length = 138
Score = 35.5 bits (78), Expect = 0.26
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 754 PPGRVACPVLXAFVCARCXARGDPXXTAKXWP 849
P G V CP+L +VC C A GD T K P
Sbjct: 84 PDGVVVCPILRHYVCPVCGATGDQAHTLKYCP 115
Score = 30.3 bits (65), Expect = 9.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 690 CRFCKNNGERAAYYRSHALR 749
C FCK+NGE Y SH L+
Sbjct: 63 CNFCKHNGESRHVYSSHQLK 82
>BC042883-1|AAH42883.1| 138|Homo sapiens nanos homolog 2
(Drosophila) protein.
Length = 138
Score = 35.5 bits (78), Expect = 0.26
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 754 PPGRVACPVLXAFVCARCXARGDPXXTAKXWP 849
P G V CP+L +VC C A GD T K P
Sbjct: 84 PDGVVVCPILRHYVCPVCGATGDQAHTLKYCP 115
Score = 30.3 bits (65), Expect = 9.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 690 CRFCKNNGERAAYYRSHALR 749
C FCK+NGE Y SH L+
Sbjct: 63 CNFCKHNGESRHVYSSHQLK 82
>X96753-1|CAA65529.1| 2322|Homo sapiens melanoma-associated
chondroitin sulfate proteoglycan (MCSP) protein.
Length = 2322
Score = 32.7 bits (71), Expect = 1.9
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 510 EGCSDRKSSESPGAVPWETVRGLATTPAWSTCSIGSMYLQLLARSRCCP 364
EGC++ S+ A+ + LA PAW T G++ L +SR P
Sbjct: 190 EGCAEEFSASDDVALGFSGPHSLAAFPAWGTQDEGTLEFTLTTQSRQAP 238
>AY359468-1|AAQ62842.1| 2322|Homo sapiens melanoma chondroitin
sulfate proteoglycan protein.
Length = 2322
Score = 32.7 bits (71), Expect = 1.9
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 510 EGCSDRKSSESPGAVPWETVRGLATTPAWSTCSIGSMYLQLLARSRCCP 364
EGC++ S+ A+ + LA PAW T G++ L +SR P
Sbjct: 190 EGCAEEFSASDDVALGFSGPHSLAAFPAWGTQDEGTLEFTLTTQSRQAP 238
>BC085610-1|AAH85610.1| 578|Homo sapiens ZFHX4 protein protein.
Length = 578
Score = 32.3 bits (70), Expect = 2.5
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 402 STQWNTYSRQVSWPAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQ-PTEEQLR 578
S+ + S ++P P V LPG + S L P + TLTPP A + PT
Sbjct: 48 SSSLHGISLPTAYPGLPGLPPVLLPGMNGPSSLPGFPQNSNTLTPPGAGMLGFPTSATSS 107
Query: 579 VLSSLPDAVLYTLLR 623
SL A LL+
Sbjct: 108 PALSLSSAPTKPLLQ 122
>BC008965-1|AAH08965.2| 837|Homo sapiens BAZ2A protein protein.
Length = 837
Score = 32.3 bits (70), Expect = 2.5
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 441 PAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQPTEEQLRVLSSLP 596
P P+ + P P + W + + P PPA S+ QPT ++ SS P
Sbjct: 244 PEPDEAESSPDPQALWFNISAQMPCNAAPTPPPAVSEDQPTPSPQQLASSKP 295
>AK131462-1|BAD18607.1| 1103|Homo sapiens protein ( Homo sapiens
cDNA FLJ16624 fis, clone TESTI4015442, moderately
similar to Mus musculus zinc finger homeodomain 4
(Zfh4-pending). ).
Length = 1103
Score = 32.3 bits (70), Expect = 2.5
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 402 STQWNTYSRQVSWPAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQ-PTEEQLR 578
S+ + S ++P P V LPG + S L P + TLTPP A + PT
Sbjct: 573 SSSLHGISLPTAYPGLPGLPPVLLPGMNGPSSLPGFPQNSNTLTPPGAGMLGFPTSATSS 632
Query: 579 VLSSLPDAVLYTLLR 623
SL A LL+
Sbjct: 633 PALSLSSAPTKPLLQ 647
>AK131399-1|BAD18546.1| 907|Homo sapiens protein ( Homo sapiens cDNA
FLJ16492 fis, clone CTONG2028758, highly similar to Mus
musculus zfh-4 mRNA for zinc-finger homeodomain protein
4. ).
Length = 907
Score = 32.3 bits (70), Expect = 2.5
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 402 STQWNTYSRQVSWPAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQ-PTEEQLR 578
S+ + S ++P P V LPG + S L P + TLTPP A + PT
Sbjct: 777 SSSLHGISLPTAYPGLPGLPPVLLPGMNGPSSLPGFPQNSNTLTPPGAGMLGFPTSATSS 836
Query: 579 VLSSLPDAVLYTLLR 623
SL A LL+
Sbjct: 837 PALSLSSAPTKPLLQ 851
>AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain
protein 4 protein.
Length = 3599
Score = 32.3 bits (70), Expect = 2.5
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 402 STQWNTYSRQVSWPAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQ-PTEEQLR 578
S+ + S ++P P V LPG + S L P + TLTPP A + PT
Sbjct: 3069 SSSLHGISLPTAYPGLPGLPPVLLPGMNGPSSLPGFPQNSNTLTPPGAGMLGFPTSATSS 3128
Query: 579 VLSSLPDAVLYTLLR 623
SL A LL+
Sbjct: 3129 PALSLSSAPTKPLLQ 3143
>AB002312-1|BAA20773.2| 1899|Homo sapiens KIAA0314 protein protein.
Length = 1899
Score = 32.3 bits (70), Expect = 2.5
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 441 PAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQPTEEQLRVLSSLP 596
P P+ + P P + W + + P PPA S+ QPT ++ SS P
Sbjct: 1302 PEPDEAESSPDPQALWFNISAQMPCNAAPTPPPAVSEDQPTPSPQQLASSKP 1353
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 31.9 bits (69), Expect = 3.2
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 5/88 (5%)
Frame = +3
Query: 423 SRQVSWPAPERSPKVPLPGSHWTSG-----LSSPPVRNETLTPPAASQVQPTEEQLRVLS 587
SR S P P++ K P SH +S S P R ++T P A++ T ++
Sbjct: 815 SRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFE 874
Query: 588 SLPDAVLYTLLRKLERIRGDDATRTNES 671
S PD L + G R S
Sbjct: 875 SSPDPELKSRTPSRHSCSGSSPPRVKSS 902
>AK000468-1|BAA91185.1| 326|Homo sapiens protein ( Homo sapiens
cDNA FLJ20461 fis, clone KAT06105. ).
Length = 326
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 302 LDDAMKEFRLNGLDSPXQSRRGQHLERASSCRYIDPMEHVL 424
++D ++E G D S +G+ L++ S C YIDPM H L
Sbjct: 204 VEDLIQESMAKG-DFDNLSGKGKPLKKFSDCSYIDPMTHNL 243
>AF462153-1|AAL59618.2| 388|Homo sapiens C21orf55 protein protein.
Length = 388
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 302 LDDAMKEFRLNGLDSPXQSRRGQHLERASSCRYIDPMEHVL 424
++D ++E G D S +G+ L++ S C YIDPM H L
Sbjct: 204 VEDLIQESMAKG-DFDNLSGKGKPLKKFSDCSYIDPMTHNL 243
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 31.9 bits (69), Expect = 3.2
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 5/88 (5%)
Frame = +3
Query: 423 SRQVSWPAPERSPKVPLPGSHWTSG-----LSSPPVRNETLTPPAASQVQPTEEQLRVLS 587
SR S P P++ K P SH +S S P R ++T P A++ T ++
Sbjct: 815 SRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFE 874
Query: 588 SLPDAVLYTLLRKLERIRGDDATRTNES 671
S PD L + G R S
Sbjct: 875 SSPDPELKSRTPSRHSCSGSSPPRVKSS 902
>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
Length = 4957
Score = 31.9 bits (69), Expect = 3.2
Identities = 22/52 (42%), Positives = 25/52 (48%)
Frame = +3
Query: 441 PAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQPTEEQLRVLSSLP 596
P PE SP P P + S LS PP + PP S + P E R LS LP
Sbjct: 30 PPPEESPLSPPPEA---SRLSPPPEDSPMSPPPEESPMSPPPEVSR-LSPLP 77
Score = 31.9 bits (69), Expect = 3.2
Identities = 22/52 (42%), Positives = 24/52 (46%)
Frame = +3
Query: 441 PAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQPTEEQLRVLSSLP 596
P PE SP P P + S LS PP + T PP S P E L SLP
Sbjct: 93 PPPEESPTSPPPEA---SRLSPPPEDSPTSPPPEDSPASPPPED--SLMSLP 139
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +3
Query: 456 SPKVPLPGSHWTSGLSSPPV--RNETLTPPAA-SQVQPTEEQ 572
SP+VPL SG +SPP+ R + TPP+A SQ + T E+
Sbjct: 1414 SPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSER 1455
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 31.9 bits (69), Expect = 3.2
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 5/88 (5%)
Frame = +3
Query: 423 SRQVSWPAPERSPKVPLPGSHWTSG-----LSSPPVRNETLTPPAASQVQPTEEQLRVLS 587
SR S P P++ K P SH +S S P R ++T P A++ T ++
Sbjct: 815 SRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFE 874
Query: 588 SLPDAVLYTLLRKLERIRGDDATRTNES 671
S PD L + G R S
Sbjct: 875 SSPDPELKSRTPSRHSCSGSSPPRVKSS 902
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +3
Query: 456 SPKVPLPGSHWTSGLSSPPV--RNETLTPPAA-SQVQPTEEQ 572
SP+VPL SG +SPP+ R + TPP+A SQ + T E+
Sbjct: 2382 SPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSER 2423
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein protein.
Length = 1275
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +3
Query: 456 SPKVPLPGSHWTSGLSSPPV--RNETLTPPAA-SQVQPTEEQ 572
SP+VPL SG +SPP+ R + TPP+A SQ + T E+
Sbjct: 905 SPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSER 946
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein protein.
Length = 956
Score = 31.9 bits (69), Expect = 3.2
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 5/88 (5%)
Frame = +3
Query: 423 SRQVSWPAPERSPKVPLPGSHWTSG-----LSSPPVRNETLTPPAASQVQPTEEQLRVLS 587
SR S P P++ K P SH +S S P R ++T P A++ T ++
Sbjct: 780 SRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFE 839
Query: 588 SLPDAVLYTLLRKLERIRGDDATRTNES 671
S PD L + G R S
Sbjct: 840 SSPDPELKSRTPSRHSCSGSSPPRVKSS 867
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 31.9 bits (69), Expect = 3.2
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 5/88 (5%)
Frame = +3
Query: 423 SRQVSWPAPERSPKVPLPGSHWTSG-----LSSPPVRNETLTPPAASQVQPTEEQLRVLS 587
SR S P P++ K P SH +S S P R ++T P A++ T ++
Sbjct: 605 SRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFE 664
Query: 588 SLPDAVLYTLLRKLERIRGDDATRTNES 671
S PD L + G R S
Sbjct: 665 SSPDPELKSRTPSRHSCSGSSPPRVKSS 692
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.9 bits (69), Expect = 3.2
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 5/88 (5%)
Frame = +3
Query: 423 SRQVSWPAPERSPKVPLPGSHWTSG-----LSSPPVRNETLTPPAASQVQPTEEQLRVLS 587
SR S P P++ K P SH +S S P R ++T P A++ T ++
Sbjct: 863 SRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFE 922
Query: 588 SLPDAVLYTLLRKLERIRGDDATRTNES 671
S PD L + G R S
Sbjct: 923 SSPDPELKSRTPSRHSCSGSSPPRVKSS 950
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +3
Query: 456 SPKVPLPGSHWTSGLSSPPV--RNETLTPPAA-SQVQPTEEQ 572
SP+VPL SG +SPP+ R + TPP+A SQ + T E+
Sbjct: 2430 SPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSER 2471
>M63959-1|AAA51553.1| 357|Homo sapiens alpha-2-macroglobulin
receptor-associated protein protein.
Length = 357
Score = 31.1 bits (67), Expect = 5.7
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = -2
Query: 426 WSTCSIGSMYLQLLARSRCCPRRDCXGESKPFSLNS-FIASSREHLPIIRLAMLDDLVAF 250
W S G Y + + + P+R+ E + LN + + R HLP +RLA L +
Sbjct: 26 WPAASHGGKYSREKNQPKPSPKRESGEEFRMEKLNQLWEKAQRLHLPPVRLAELHADLKI 85
Query: 249 QSEDR--FERSGISWLNEDESTE 187
Q D +++ + L+ED E
Sbjct: 86 QERDELAWKKLKLDGLDEDGEKE 108
>BC119707-1|AAI19708.1| 106|Homo sapiens late cornified envelope 2A
protein.
Length = 106
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 541 PPAKCSPPRSSCGC*ARCRTPCSTPC 618
PP KC PP+ C +CR C PC
Sbjct: 12 PPPKC-PPKCPPKCPPKCRPQCPAPC 36
>BC112067-1|AAI12068.1| 357|Homo sapiens low density lipoprotein
receptor-related protein associated protein 1 protein.
Length = 357
Score = 31.1 bits (67), Expect = 5.7
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = -2
Query: 426 WSTCSIGSMYLQLLARSRCCPRRDCXGESKPFSLNS-FIASSREHLPIIRLAMLDDLVAF 250
W S G Y + + + P+R+ E + LN + + R HLP +RLA L +
Sbjct: 26 WPAASHGGKYSREKNQPKPSPKRESGEEFRMEKLNQLWEKAQRLHLPPVRLAELHADLKI 85
Query: 249 QSEDR--FERSGISWLNEDESTE 187
Q D +++ + L+ED E
Sbjct: 86 QERDELAWKKLKLDGLDEDGEKE 108
>BC105074-1|AAI05075.1| 357|Homo sapiens low density lipoprotein
receptor-related protein associated protein 1 protein.
Length = 357
Score = 31.1 bits (67), Expect = 5.7
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = -2
Query: 426 WSTCSIGSMYLQLLARSRCCPRRDCXGESKPFSLNS-FIASSREHLPIIRLAMLDDLVAF 250
W S G Y + + + P+R+ E + LN + + R HLP +RLA L +
Sbjct: 26 WPAASHGGKYSREKNQPKPSPKRESGEEFRMEKLNQLWEKAQRLHLPPVRLAELHADLKI 85
Query: 249 QSEDR--FERSGISWLNEDESTE 187
Q D +++ + L+ED E
Sbjct: 86 QERDELAWKKLKLDGLDEDGEKE 108
>BC047712-1|AAH47712.1| 244|Homo sapiens coiled-coil domain
containing 95 protein.
Length = 244
Score = 31.1 bits (67), Expect = 5.7
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 342 ILRY-NPDEDNIWSARAVADTSTQWNTYSRQVSWPAPERSPKVPLPGSHWTSGLSSPP 512
+L+Y N DED+ S + +++ + PAP+R PL G+ S LS PP
Sbjct: 57 LLQYENVDEDSSDSDATASSDNSETEGTPKLSDTPAPKRKRSPPLGGAPSPSSLSLPP 114
>AY189289-1|AAO86733.1| 137|Homo sapiens LP9167 protein protein.
Length = 137
Score = 31.1 bits (67), Expect = 5.7
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 342 ILRY-NPDEDNIWSARAVADTSTQWNTYSRQVSWPAPERSPKVPLPGSHWTSGLSSPP 512
+L+Y N DED+ S + +++ + PAP+R PL G+ S LS PP
Sbjct: 57 LLQYENVDEDSSDSDATASSDNSETEGTPKLSDTPAPKRKRSPPLGGAPSPSSLSLPP 114
>AL590235-1|CAM21451.1| 357|Homo sapiens low density lipoprotein
receptor-related protein associated protein 1 protein.
Length = 357
Score = 31.1 bits (67), Expect = 5.7
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = -2
Query: 426 WSTCSIGSMYLQLLARSRCCPRRDCXGESKPFSLNS-FIASSREHLPIIRLAMLDDLVAF 250
W S G Y + + + P+R+ E + LN + + R HLP +RLA L +
Sbjct: 26 WPAASHGGKYSREKNQPKPSPKRESGEEFRMEKLNQLWEKAQRLHLPPVRLAELHADLKI 85
Query: 249 QSEDR--FERSGISWLNEDESTE 187
Q D +++ + L+ED E
Sbjct: 86 QERDELAWKKLKLDGLDEDGEKE 108
>AL139247-7|CAI21685.1| 106|Homo sapiens late cornified envelope 2A
protein.
Length = 106
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 541 PPAKCSPPRSSCGC*ARCRTPCSTPC 618
PP KC PP+ C +CR C PC
Sbjct: 12 PPPKC-PPKCPPKCPPKCRPQCPAPC 36
>AK222504-1|BAD96224.1| 357|Homo sapiens low density lipoprotein
receptor-related protein associated protein 1 variant
protein.
Length = 357
Score = 31.1 bits (67), Expect = 5.7
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = -2
Query: 426 WSTCSIGSMYLQLLARSRCCPRRDCXGESKPFSLNS-FIASSREHLPIIRLAMLDDLVAF 250
W S G Y + + + P+R+ E + LN + + R HLP +RLA L +
Sbjct: 26 WPAASHGGKYSREKNQPKPSPKRESGEEFRMEKLNQLWEKAQRLHLPPVRLAELHADLKI 85
Query: 249 QSEDR--FERSGISWLNEDESTE 187
Q D +++ + L+ED E
Sbjct: 86 QERDELAWKKLKLDGLDEDGEKE 108
>AK075133-1|BAC11424.1| 244|Homo sapiens protein ( Homo sapiens
cDNA FLJ90652 fis, clone PLACE1004492, weakly similar to
VERPROLIN. ).
Length = 244
Score = 31.1 bits (67), Expect = 5.7
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 342 ILRY-NPDEDNIWSARAVADTSTQWNTYSRQVSWPAPERSPKVPLPGSHWTSGLSSPP 512
+L+Y N DED+ S + +++ + PAP+R PL G+ S LS PP
Sbjct: 57 LLQYENVDEDSSDSDATASSDNSETEGTPKLSDTPAPKRKRSPPLGGAPSPSSLSLPP 114
>AK074137-1|BAB84963.1| 161|Homo sapiens FLJ00210 protein protein.
Length = 161
Score = 31.1 bits (67), Expect = 5.7
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 342 ILRY-NPDEDNIWSARAVADTSTQWNTYSRQVSWPAPERSPKVPLPGSHWTSGLSSPP 512
+L+Y N DED+ S + +++ + PAP+R PL G+ S LS PP
Sbjct: 81 LLQYENVDEDSSDSDATASSDNSETEGTPKLSDTPAPKRKRSPPLGGAPSPSSLSLPP 138
>AF035767-1|AAC67373.1| 357|Homo sapiens lipoprotein receptor
associated protein protein.
Length = 357
Score = 31.1 bits (67), Expect = 5.7
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = -2
Query: 426 WSTCSIGSMYLQLLARSRCCPRRDCXGESKPFSLNS-FIASSREHLPIIRLAMLDDLVAF 250
W S G Y + + + P+R+ E + LN + + R HLP +RLA L +
Sbjct: 26 WPAASHGGKYSREKNQPKPSPKRESGEEFRMEKLNQLWEKAQRLHLPPVRLAELHADLKI 85
Query: 249 QSEDR--FERSGISWLNEDESTE 187
Q D +++ + L+ED E
Sbjct: 86 QERDELAWKKLKLDGLDEDGEKE 108
>U40215-1|AAC50718.1| 478|Homo sapiens synapsin IIb protein.
Length = 478
Score = 30.7 bits (66), Expect = 7.5
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Frame = +3
Query: 414 NTYSRQVSWPAPERSPKVPLPGSHWTSGLSSPPVRN---ETLTPPA---ASQVQPTEE-Q 572
N Y + P P++ P P PG S ++PP + E PPA A+Q PT
Sbjct: 20 NGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAAQPAPTPSVG 79
Query: 573 LRVLSSLPDAVLYT 614
SSL AV T
Sbjct: 80 SSFFSSLSQAVKQT 93
>U46194-2|AAB38087.1| 187|Homo sapiens protein ( Human renal cell
carcinoma antigen RAGE-4 mRNA, complete putative cds. ).
Length = 187
Score = 30.3 bits (65), Expect = 9.9
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 14/96 (14%)
Frame = +1
Query: 244 RLECHQVIQHCQSDDR*MLSG*RDEGVQTERLGFSXTIPTRTTS---GAREQLQ---IHR 405
R+ HQ +QH ++ +G DEG+ + IP + AR Q +
Sbjct: 39 RIAAHQALQHPYFQEQRTQNGSEDEGLSRPPPHSNTFIPQPSAEHLHAARPQCHPSCVSL 98
Query: 406 PNGT--------RTPGRCRGQPPNGLPRYRSRALTG 489
P+ T +TPGR G+P + P +R +AL G
Sbjct: 99 PSSTHLTLLTLKKTPGRSTGEPSH-TPHWRGQALQG 133
>L39059-1|AAA62861.1| 869|Homo sapiens transcription factor SL1
protein.
Length = 869
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 450 ERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQP 560
ER P VP+ W GL SP + L PP S VQP
Sbjct: 470 ERLPLVPM--LKWNHGLPSPLLLARLLPPPRPSCVQP 504
>BC028131-1|AAH28131.1| 775|Homo sapiens TATA box binding protein
(TBP)-associated factor, RNA polymerase I, C, 110kDa
protein.
Length = 775
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 450 ERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQP 560
ER P VP+ W GL SP + L PP S VQP
Sbjct: 377 ERLPLVPM--LKWNHGLPSPLLLARLLPPPRPSCVQP 411
>AY158985-1|AAN38818.1| 869|Homo sapiens TATA box binding protein
(TBP)-associated factor, RNA polymerase I, C, 110kDa
protein.
Length = 869
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 450 ERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQP 560
ER P VP+ W GL SP + L PP S VQP
Sbjct: 470 ERLPLVPM--LKWNHGLPSPLLLARLLPPPRPSCVQP 504
>AK222527-1|BAD96247.1| 357|Homo sapiens low density lipoprotein
receptor-related protein associated protein 1 variant
protein.
Length = 357
Score = 30.3 bits (65), Expect = 9.9
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = -2
Query: 426 WSTCSIGSMYLQLLARSRCCPRRDCXGESKPFSLNS-FIASSREHLPIIRLAMLDDLVAF 250
W S G Y + + + P+R+ E + LN + + R HLP +RLA L +
Sbjct: 26 WPAASHGGKYSREKNQPKPSPKRESGEEFRMEKLNQLWEKAQRLHLPPVRLAELHADLKI 85
Query: 249 QSEDR--FERSGISWLNEDESTE 187
Q D +++ + L+ED E
Sbjct: 86 QERDELAWKKLKLDDLDEDGEKE 108
>AK097404-1|BAC05037.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ40085 fis, clone TESTI2002993. ).
Length = 416
Score = 30.3 bits (65), Expect = 9.9
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +1
Query: 346 SXTIPTRTTSGAREQLQIHRPNGTRTPGRCRG--QPPNGLPRYRSRALTGLPV*AALLCA 519
S +P + R ++ + RP+ + P G +P GL GLP +++L A
Sbjct: 307 SLGLPAASAGPNRPEVGLSRPSSS-LPAASAGLSRPQVGLEMGLEELQVGLPGPSSVLSA 365
Query: 520 MRP*HLLPPAKCSPPRSSC 576
P LP S P SSC
Sbjct: 366 ASPGAKLPRVSLSRPSSSC 384
>AF110334-1|AAD28183.1| 1246|Homo sapiens APC2 protein protein.
Length = 1246
Score = 30.3 bits (65), Expect = 9.9
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = -2
Query: 522 HCAQEGCSDRKSSESPGAVPWETVRGLATTPAWSTCSIGSMYLQLLARSRCCP-RRDCXG 346
+ + GC D ++P ++ G +PA + +GS +LQ A++R P RR
Sbjct: 496 YASDSGCFD--DDDAPSSLAAAAATGEPASPAALSLFLGSPFLQGQAQARTPPTRRGGKE 553
Query: 345 ESKPFSLNSFIASSREHLPIIRLAMLDDLV 256
K S + +A+ + + +A +D LV
Sbjct: 554 AEKDTSGEAAVAAKAKAKLALAVARIDQLV 583
>AB209594-1|BAD92831.1| 456|Homo sapiens TBP-associated factor 1C
isoform 1 variant protein.
Length = 456
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 450 ERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQP 560
ER P VP+ W GL SP + L PP S VQP
Sbjct: 57 ERLPLVPM--LKWNHGLPSPLLLARLLPPPRPSCVQP 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,922,493
Number of Sequences: 237096
Number of extensions: 2910469
Number of successful extensions: 13613
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 12508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13595
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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