Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_G24
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46828-7|CAA86860.1| 311|Caenorhabditis elegans Hypothetical pr... 33 0.28
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 30 2.6
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 30 2.6
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z46828-7|CAA86860.1| 311|Caenorhabditis elegans Hypothetical
protein R03D7.7 protein.
Length = 311
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 760 GRVACPVLXAFVCARCXARGDPXXTAK 840
GRV CP L + VC C A GD T K
Sbjct: 276 GRVVCPKLRSMVCGICGATGDNAHTTK 302
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 441 PAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQ 551
P+P R+P P P + LS PP T+ PP++S+
Sbjct: 24 PSPRRAP--PPPPHRKPASLSPPPDDENTIRPPSSSE 58
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +3
Query: 408 QWNTYSRQVSWPAPERSPKVPLPGSHWTSGLSSPP---VRNETLTPPAASQVQPTEE 569
Q +T ++Q P P+ P S ++G S PP VR E L PP ++Q PT++
Sbjct: 103 QASTSTQQFHHPQRPPPPQYDQPSS--STGSSLPPLHTVRYEQLPPPPSNQRTPTQQ 157
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 396 DTSTQWNTYSRQVSWPAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQPTEEQL 575
++ +Q S Q P P P + PG+ +S +S+P + TPP Q+QP L
Sbjct: 362 ESDSQLRAQSMQCPMP-PMMMPPILPPGAS-SSAVSAP---HFIPTPPGVLQIQPGTTNL 416
Query: 576 R-VLSSLPDAVLYTLL 620
R V +PD+++ L+
Sbjct: 417 RQVRMWVPDSMIGALI 432
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 396 DTSTQWNTYSRQVSWPAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQPTEEQL 575
++ +Q S Q P P P + PG+ +S +S+P + TPP Q+QP L
Sbjct: 486 ESDSQLRAQSMQCPMP-PMMMPPILPPGAS-SSAVSAP---HFIPTPPGVLQIQPGTTNL 540
Query: 576 R-VLSSLPDAVLYTLL 620
R V +PD+++ L+
Sbjct: 541 RQVRMWVPDSMIGALI 556
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +3
Query: 420 YSRQVSWPAPERSPKVPLPGSHWTSGLSSPPVRNET-----LTPPAASQVQPTEEQLRVL 584
Y SW A E++ K P P + GLS P+ +E LT A+S +P E +
Sbjct: 3562 YHNGESWKA-EKNIKPPKPVRNTKKGLSPEPIESEVHEIRLLTRVASSSEEPEEVDVIPA 3620
Query: 585 SSLP 596
S P
Sbjct: 3621 ESTP 3624
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +3
Query: 420 YSRQVSWPAPERSPKVPLPGSHWTSGLSSPPVRNET-----LTPPAASQVQPTEEQLRVL 584
Y SW A E++ K P P + GLS P+ +E LT A+S +P E +
Sbjct: 3551 YHNGESWKA-EKNIKPPKPVRNTKKGLSPEPIESEVHEIRLLTRVASSSEEPEEVDVIPA 3609
Query: 585 SSLP 596
S P
Sbjct: 3610 ESTP 3613
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +3
Query: 420 YSRQVSWPAPERSPKVPLPGSHWTSGLSSPPVRNET-----LTPPAASQVQPTEEQLRVL 584
Y SW A E++ K P P + GLS P+ +E LT A+S +P E +
Sbjct: 3551 YHNGESWKA-EKNIKPPKPVRNTKKGLSPEPIESEVHEIRLLTRVASSSEEPEEVDVIPA 3609
Query: 585 SSLP 596
S P
Sbjct: 3610 ESTP 3613
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +3
Query: 420 YSRQVSWPAPERSPKVPLPGSHWTSGLSSPPVRNET-----LTPPAASQVQPTEEQLRVL 584
Y SW A E++ K P P + GLS P+ +E LT A+S +P E +
Sbjct: 3562 YHNGESWKA-EKNIKPPKPVRNTKKGLSPEPIESEVHEIRLLTRVASSSEEPEEVDVIPA 3620
Query: 585 SSLP 596
S P
Sbjct: 3621 ESTP 3624
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +3
Query: 420 YSRQVSWPAPERSPKVPLPGSHWTSGLSSPPVRNET-----LTPPAASQVQPTEEQLRVL 584
Y SW A E++ K P P + GLS P+ +E LT A+S +P E +
Sbjct: 3551 YHNGESWKA-EKNIKPPKPVRNTKKGLSPEPIESEVHEIRLLTRVASSSEEPEEVDVIPA 3609
Query: 585 SSLP 596
S P
Sbjct: 3610 ESTP 3613
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +3
Query: 420 YSRQVSWPAPERSPKVPLPGSHWTSGLSSPPVRNET-----LTPPAASQVQPTEEQLRVL 584
Y SW A E++ K P P + GLS P+ +E LT A+S +P E +
Sbjct: 3551 YHNGESWKA-EKNIKPPKPVRNTKKGLSPEPIESEVHEIRLLTRVASSSEEPEEVDVIPA 3609
Query: 585 SSLP 596
S P
Sbjct: 3610 ESTP 3613
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,269,704
Number of Sequences: 27780
Number of extensions: 417679
Number of successful extensions: 1288
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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