Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G22
         (885 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.3  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   3.1  
AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding pr...    25   4.1  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   5.4  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   5.4  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -1

Query: 462 STATSSIEDDMSIPIHICPFSSSTVPDNPEP 370
           S+AT S++DD  + I   P  +S+  ++P P
Sbjct: 347 SSATPSVDDDEDVVIGRLPADNSSALNSPNP 377


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 790 TKKTSCFGRIWIVNYNSS 737
           +K  + FG  W VNYN+S
Sbjct: 472 SKSMNIFGSAWSVNYNTS 489


>AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding
           protein protein.
          Length = 154

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 799 WWRWSFTSGL 828
           WWRW F  GL
Sbjct: 9   WWRWDFILGL 18


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +1

Query: 367 MWFRIIWYSARRKWTYVDWDG 429
           +W R++W   + +W   D+ G
Sbjct: 77  VWLRLVWSDYQLQWDEADYGG 97


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 790 TKKTSCFGRIWIVNYNSS 737
           +K  + FG  W VNYN+S
Sbjct: 462 SKGMNIFGSAWSVNYNTS 479


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 865,448
Number of Sequences: 2352
Number of extensions: 16802
Number of successful extensions: 52
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)