Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_G21
(889 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein. 78 4e-14
M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein. 78 4e-14
CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein. 78 4e-14
BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein. 78 4e-14
BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein. 78 4e-14
BC019609-1|AAH19609.1| 260|Homo sapiens Unknown (protein for IM... 78 4e-14
BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein. 78 4e-14
BC015218-1|AAH15218.2| 260|Homo sapiens FBL protein protein. 78 4e-14
AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227] ... 78 4e-14
AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein. 78 4e-14
>X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 78.2 bits (184), Expect = 4e-14
Identities = 37/51 (72%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Frame = +2
Query: 392 RAGGGFKG---GKQVIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKR 535
R GG +G GK V++EPHRH GVFI RGKEDALVTKNLVPG VYGEKR
Sbjct: 72 RGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKR 122
>M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 78.2 bits (184), Expect = 4e-14
Identities = 37/51 (72%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Frame = +2
Query: 392 RAGGGFKG---GKQVIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKR 535
R GG +G GK V++EPHRH GVFI RGKEDALVTKNLVPG VYGEKR
Sbjct: 72 RGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKR 122
>CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein.
Length = 321
Score = 78.2 bits (184), Expect = 4e-14
Identities = 37/51 (72%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Frame = +2
Query: 392 RAGGGFKG---GKQVIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKR 535
R GG +G GK V++EPHRH GVFI RGKEDALVTKNLVPG VYGEKR
Sbjct: 72 RGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKR 122
>BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 78.2 bits (184), Expect = 4e-14
Identities = 37/51 (72%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Frame = +2
Query: 392 RAGGGFKG---GKQVIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKR 535
R GG +G GK V++EPHRH GVFI RGKEDALVTKNLVPG VYGEKR
Sbjct: 72 RGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKR 122
>BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 78.2 bits (184), Expect = 4e-14
Identities = 37/51 (72%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Frame = +2
Query: 392 RAGGGFKG---GKQVIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKR 535
R GG +G GK V++EPHRH GVFI RGKEDALVTKNLVPG VYGEKR
Sbjct: 72 RGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKR 122
>BC019609-1|AAH19609.1| 260|Homo sapiens Unknown (protein for
IMAGE:4538098) protein.
Length = 260
Score = 78.2 bits (184), Expect = 4e-14
Identities = 37/51 (72%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Frame = +2
Query: 392 RAGGGFKG---GKQVIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKR 535
R GG +G GK V++EPHRH GVFI RGKEDALVTKNLVPG VYGEKR
Sbjct: 11 RGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKR 61
>BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 78.2 bits (184), Expect = 4e-14
Identities = 37/51 (72%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Frame = +2
Query: 392 RAGGGFKG---GKQVIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKR 535
R GG +G GK V++EPHRH GVFI RGKEDALVTKNLVPG VYGEKR
Sbjct: 72 RGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKR 122
>BC015218-1|AAH15218.2| 260|Homo sapiens FBL protein protein.
Length = 260
Score = 78.2 bits (184), Expect = 4e-14
Identities = 37/51 (72%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Frame = +2
Query: 392 RAGGGFKG---GKQVIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKR 535
R GG +G GK V++EPHRH GVFI RGKEDALVTKNLVPG VYGEKR
Sbjct: 11 RGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKR 61
>AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227]
protein.
Length = 227
Score = 78.2 bits (184), Expect = 4e-14
Identities = 37/51 (72%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Frame = +2
Query: 392 RAGGGFKG---GKQVIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKR 535
R GG +G GK V++EPHRH GVFI RGKEDALVTKNLVPG VYGEKR
Sbjct: 72 RGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKR 122
>AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein.
Length = 318
Score = 78.2 bits (184), Expect = 4e-14
Identities = 37/51 (72%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Frame = +2
Query: 392 RAGGGFKG---GKQVIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKR 535
R GG +G GK V++EPHRH GVFI RGKEDALVTKNLVPG VYGEKR
Sbjct: 69 RGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKR 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,130,441
Number of Sequences: 237096
Number of extensions: 737686
Number of successful extensions: 1406
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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