Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G21
         (889 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA...    89   6e-18
BT001738-1|AAN71493.1|  331|Drosophila melanogaster RE72617p pro...    88   2e-17
X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin pr...    75   2e-13
BT023239-1|AAY55655.1|  349|Drosophila melanogaster IP10714p pro...    40   0.006
AE014297-1590|AAF54870.1|  349|Drosophila melanogaster CG10909-P...    40   0.006

>AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA
           protein.
          Length = 344

 Score = 89.4 bits (212), Expect = 6e-18
 Identities = 40/45 (88%), Positives = 41/45 (91%)
 Frame = +2

Query: 401 GGFKGGKQVIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKR 535
           GGFKGGK V IEPHRH GVFIARGKEDALVT+N VPGSEVYGEKR
Sbjct: 103 GGFKGGKTVTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKR 147


>BT001738-1|AAN71493.1|  331|Drosophila melanogaster RE72617p
           protein.
          Length = 331

 Score = 87.8 bits (208), Expect = 2e-17
 Identities = 40/45 (88%), Positives = 40/45 (88%)
 Frame = +2

Query: 401 GGFKGGKQVIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKR 535
           GGFKGGK V IEPHRH GVFIARGKEDALVT N VPGSEVYGEKR
Sbjct: 90  GGFKGGKTVTIEPHRHEGVFIARGKEDALVTGNFVPGSEVYGEKR 134


>X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin
           protein.
          Length = 147

 Score = 74.5 bits (175), Expect = 2e-13
 Identities = 33/38 (86%), Positives = 34/38 (89%)
 Frame = +2

Query: 401 GGFKGGKQVIIEPHRHPGVFIARGKEDALVTKNLVPGS 514
           GGFKGGK V IEPHRH GVFIARGKEDALVT+N VPGS
Sbjct: 110 GGFKGGKTVTIEPHRHEGVFIARGKEDALVTRNFVPGS 147


>BT023239-1|AAY55655.1|  349|Drosophila melanogaster IP10714p
           protein.
          Length = 349

 Score = 39.5 bits (88), Expect = 0.006
 Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
 Frame = +2

Query: 431 IEPHRHPGVFIARGKEDA--LVTKNLVPGSEVYGEKR 535
           IEPHRH GV++ R + DA  L+T+N    ++ YGE+R
Sbjct: 114 IEPHRHYGVYLLRNRFDAIQLLTRNTSSSADDYGERR 150


>AE014297-1590|AAF54870.1|  349|Drosophila melanogaster CG10909-PA
           protein.
          Length = 349

 Score = 39.5 bits (88), Expect = 0.006
 Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
 Frame = +2

Query: 431 IEPHRHPGVFIARGKEDA--LVTKNLVPGSEVYGEKR 535
           IEPHRH GV++ R + DA  L+T+N    ++ YGE+R
Sbjct: 114 IEPHRHYGVYLLRNRFDAIQLLTRNTSSSADDYGERR 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,623,480
Number of Sequences: 53049
Number of extensions: 209506
Number of successful extensions: 514
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)