Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_G20
(842 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0922 - 33022709-33023545 30 2.0
01_01_0089 - 699533-699643,699738-700046,700134-700220,700298-70... 30 2.0
12_01_0160 - 1212295-1213586,1213828-1213976,1214288-1214445,121... 30 2.7
06_03_0270 + 19009412-19009888,19009936-19011048,19011810-190118... 30 2.7
03_05_0814 + 27907158-27907368,27907981-27908270,27910250-279104... 30 2.7
11_01_0161 - 1327286-1328592,1328819-1329000,1329279-1329436,132... 29 3.5
10_08_0078 + 14699588-14700645,14700739-14700874,14701076-14701096 29 3.5
01_06_1127 - 34699119-34699360,34699446-34699689,34699773-346998... 29 3.5
12_02_0722 - 22521909-22521932,22522291-22522419,22522976-225242... 29 4.6
07_03_0583 - 19684388-19684498,19685083-19685216,19685765-196858... 29 4.6
>01_06_0922 - 33022709-33023545
Length = 278
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 192 KRDALEDILSEIVKKDISIHVQEI--LEKWEECQPKKEAAQPATDVDSKLAKLLESQTLA 365
+ + ++++LSE + + + + EE + +K+A +P+ D D ++ L +LA
Sbjct: 40 EEEKVKEVLSETPSAKVRAEAKPVANVAVLEEPEAEKQAPKPSADADVTVSDLGSCMSLA 99
Query: 366 TTTRREYTDE 395
T R E E
Sbjct: 100 TDDRSEAASE 109
>01_01_0089 - 699533-699643,699738-700046,700134-700220,700298-700469,
700547-701373,701487-701559,701993-702078,702153-702227,
702308-702548,702905-703239,703328-703414,703497-703640,
703714-704670
Length = 1167
Score = 30.3 bits (65), Expect = 2.0
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +3
Query: 168 EGEDTVDEKRDALEDILSEIVKKDISIHVQEILEKWEECQPKKEAAQPATDVD----SKL 335
EGE V E S + KDI + ++ EK +KE ++ + D D K
Sbjct: 835 EGEKGVPSSPPRREQNPSHALDKDIVYYSRKKKEK-----KRKEKSRSSLDNDLIQLGKR 889
Query: 336 AKLLESQTLATTTRREYTDEE--KKIREAI 419
++ ++T TTRRE+ D+ K++R AI
Sbjct: 890 CRIATTRTAIKTTRREWPDDAIVKEVRTAI 919
>12_01_0160 -
1212295-1213586,1213828-1213976,1214288-1214445,
1214860-1215004,1215102-1215226
Length = 622
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +3
Query: 198 DALEDILSEIVKKDISIHVQEILEKWEECQPKKEAAQPATDVDSKLAKLLESQTLATTTR 377
D +D+LS +V S + L W K EAA P + +KL + L+
Sbjct: 15 DKEKDLLSAVVGDIRSYSGSDPLRPWLRGMRKMEAALPPATLRAKLPRFLQKCAQEFQDD 74
Query: 378 REYTDEEKKIR 410
Y D+ + +R
Sbjct: 75 ARYRDDSRYLR 85
>06_03_0270 +
19009412-19009888,19009936-19011048,19011810-19011899,
19011928-19012027,19012135-19012333,19012559-19012679
Length = 699
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 262 YLRSGRNVNRKKRLHNLQQMSIANLPNFSNPRHW 363
Y+R +V K R+ + + +IAN+P R+W
Sbjct: 347 YIRLEESVGNKDRIREVYERAIANIPPAEEKRYW 380
>03_05_0814 +
27907158-27907368,27907981-27908270,27910250-27910493,
27910589-27910927,27911036-27911121,27911218-27911325,
27911471-27911778,27911864-27912127,27912227-27913010
Length = 877
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -1
Query: 278 LPLLKYFLYVYRDVFFNYLRQNIF*SVSL--FIDGVFAFQNTKIYKTRTRFHLFL-VISI 108
LPLL +YV RD F +L+ + F SL ++GV T + T F F ++ +
Sbjct: 256 LPLLDLNIYVPRDERFGHLKMSDFLGYSLKAIVEGVLPIIRTYVDTTPKEFDSFQDIMEL 315
Query: 107 YQ 102
Y+
Sbjct: 316 YE 317
>11_01_0161 -
1327286-1328592,1328819-1329000,1329279-1329436,
1329852-1329996,1330083-1330207
Length = 638
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +3
Query: 198 DALEDILSEIVKKDISIHVQEILEKWEECQPKKEAAQPATDVDSKLAKLLESQTLATTTR 377
D +D+LS +V S + L W K EAA P + +KL + L+
Sbjct: 15 DKEKDLLSAVVGDIRSYSGSDPLRPWLRGMRKMEAALPPATLRAKLPRFLQKCAQEFQDD 74
Query: 378 REYTDEEKKIR 410
Y D+ + +R
Sbjct: 75 ARYRDDPRYLR 85
>10_08_0078 + 14699588-14700645,14700739-14700874,14701076-14701096
Length = 404
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/68 (27%), Positives = 38/68 (55%)
Frame = +3
Query: 153 YLGILEGEDTVDEKRDALEDILSEIVKKDISIHVQEILEKWEECQPKKEAAQPATDVDSK 332
Y ++ ED ++ +D +D S ++ DI+I + ++E E PK + P D++ +
Sbjct: 130 YSKFIKRED-FEKSKDLRDD--SFTIRCDIAIVREFLVETTEVLPPKSFVSVPPPDMNLQ 186
Query: 333 LAKLLESQ 356
L +LLE++
Sbjct: 187 LGELLETE 194
>01_06_1127 -
34699119-34699360,34699446-34699689,34699773-34699844,
34700123-34700218,34700322-34700438,34700520-34700676,
34700770-34700867,34700940-34701098,34701169-34701339,
34701402-34701479,34701548-34701667,34701968-34702085,
34702216-34702346,34702452-34702528,34702858-34702969,
34703057-34703239,34703416-34703517,34703617-34703718,
34703817-34703912,34704481-34704558,34704652-34704744,
34704817-34704938,34705035-34705116,34705204-34705278,
34705385-34705645,34705730-34705854,34705956-34706031,
34706128-34706277,34706359-34706454,34706707-34706814,
34706956-34707056,34707727-34707814,34707894-34708006,
34708278-34708383,34709143-34709247,34709356-34709427,
34709931-34709971,34710067-34710175,34710252-34710317,
34710404-34710540,34710788-34710890,34711416-34711535,
34711707-34711820,34711923-34712008,34712088-34712170,
34713283-34713347,34713444-34713621,34713697-34713776,
34714926-34715049,34715140-34715245,34715399-34715561
Length = 1966
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/80 (27%), Positives = 34/80 (42%)
Frame = +3
Query: 177 DTVDEKRDALEDILSEIVKKDISIHVQEILEKWEECQPKKEAAQPATDVDSKLAKLLESQ 356
D E RDA +L+ I K ++ LEK ++ + KK + + D+ + S
Sbjct: 457 DGTPEVRDASFSVLTAIAKMVGMKPLERSLEKLDDVRKKKLSDMIGSASDTTSGTVAASN 516
Query: 357 TLATTTRREYTDEEKKIREA 416
T T+ RE D R A
Sbjct: 517 TGVGTSAREVMDSSSMRRSA 536
>12_02_0722 -
22521909-22521932,22522291-22522419,22522976-22524242,
22524659-22525461
Length = 740
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 228 VKKDISIHVQEILEKWEECQPKKEAAQP-ATDVDSKLAKLLESQT 359
V KDI V+++ E+ + C+ AA+P DVDS+L + T
Sbjct: 115 VIKDIMDQVKKVSERRDRCRVDDIAARPTVVDVDSRLEAMYRKAT 159
>07_03_0583 -
19684388-19684498,19685083-19685216,19685765-19685888,
19685982-19686251,19686961-19687155,19687236-19687328,
19687411-19687539,19687646-19689277
Length = 895
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 138 CSGLIYLGILEGEDTVDEKRDALEDILSEIVKKDISIHVQEILEKW 275
CSG+IY+ + +DE+ ++ LS +V + IS +E+L W
Sbjct: 252 CSGMIYVEFAAFKSHIDEEHIVGKEFLS-LVPERISDSERELLRSW 296
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,475,956
Number of Sequences: 37544
Number of extensions: 335423
Number of successful extensions: 989
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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