Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_G20
(842 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047776-1|AAH47776.1| 227|Homo sapiens CCDC43 protein protein. 60 1e-08
AK056357-1|BAB71162.1| 224|Homo sapiens protein ( Homo sapiens ... 60 1e-08
X64838-1|CAA46050.1| 1427|Homo sapiens restin protein. 33 0.98
M97501-1|AAA35693.1| 1392|Homo sapiens cytoplasmic linker protei... 33 0.98
BC126305-1|AAI26306.1| 1438|Homo sapiens CLIP1 protein protein. 33 0.98
BC117209-1|AAI17210.1| 1438|Homo sapiens CLIP1 protein protein. 33 0.98
BC114213-1|AAI14214.1| 1392|Homo sapiens CAP-GLY domain containi... 33 0.98
BC062543-1|AAH62543.1| 653|Homo sapiens CLIP1 protein protein. 33 0.98
AB209115-1|BAD92352.1| 1065|Homo sapiens restin isoform a varian... 33 0.98
>BC047776-1|AAH47776.1| 227|Homo sapiens CCDC43 protein protein.
Length = 227
Score = 60.1 bits (139), Expect = 1e-08
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Frame = +3
Query: 132 KACSGLIYLGILEGEDTVDEKRDALEDILSEIVKKDISIHV-QEILEKWEECQPKKEAAQ 308
+A G LGIL+ E+ +EK DAL+ ILS +++D +++ +EI+E+W E Q +
Sbjct: 37 RAVYGAYILGILQEEEE-EEKLDALQGILSAFLEEDSLLNICKEIVERWSETQNVVTKVK 95
Query: 309 PATDVDSKLAKLLESQTLATTTRREYTDEEKKIREAILSQYSQLS 443
+V + +A L+E Q R ++EEK+ + A+L+QY+ ++
Sbjct: 96 KEDEVQA-IATLIEKQAQIVVKPRMVSEEEKQRKAALLAQYADVT 139
>AK056357-1|BAB71162.1| 224|Homo sapiens protein ( Homo sapiens
cDNA FLJ31795 fis, clone NT2RI2008812. ).
Length = 224
Score = 60.1 bits (139), Expect = 1e-08
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Frame = +3
Query: 132 KACSGLIYLGILEGEDTVDEKRDALEDILSEIVKKDISIHV-QEILEKWEECQPKKEAAQ 308
+A G LGIL+ E+ +EK DAL+ ILS +++D +++ +EI+E+W E Q +
Sbjct: 37 RAVYGAYILGILQEEEE-EEKLDALQGILSAFLEEDSLLNICKEIVERWSETQNVVTKVK 95
Query: 309 PATDVDSKLAKLLESQTLATTTRREYTDEEKKIREAILSQYSQLS 443
+V + +A L+E Q R ++EEK+ + A+L+QY+ ++
Sbjct: 96 KEDEVQA-IATLIEKQAQIVVKPRMVSEEEKQRKAALLAQYADVT 139
>X64838-1|CAA46050.1| 1427|Homo sapiens restin protein.
Length = 1427
Score = 33.5 bits (73), Expect = 0.98
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 180 TVDEKRDALEDILSEIVKKDISIHVQEILEKWEECQPKKEAAQPATDVDSKLAKLLESQT 359
TV EK +E ++KD+++ VQE+ E + + E+ +PA DVD L+ L E +
Sbjct: 494 TVSEKSRIME------LEKDLALRVQEVAE----LRRRLESNKPAGDVDMSLSLLQEISS 543
Query: 360 LATTTRREYTDEEKKI 407
L TD +++I
Sbjct: 544 LQEKLEVTRTDHQREI 559
>M97501-1|AAA35693.1| 1392|Homo sapiens cytoplasmic linker
protein-170 alpha-2 protein.
Length = 1392
Score = 33.5 bits (73), Expect = 0.98
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 180 TVDEKRDALEDILSEIVKKDISIHVQEILEKWEECQPKKEAAQPATDVDSKLAKLLESQT 359
TV EK +E ++KD+++ VQE+ E + + E+ +PA DVD L+ L E +
Sbjct: 459 TVSEKSRIME------LEKDLALRVQEVAE----LRRRLESNKPAGDVDMSLSLLQEISS 508
Query: 360 LATTTRREYTDEEKKI 407
L TD +++I
Sbjct: 509 LQEKLEVTRTDHQREI 524
>BC126305-1|AAI26306.1| 1438|Homo sapiens CLIP1 protein protein.
Length = 1438
Score = 33.5 bits (73), Expect = 0.98
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 180 TVDEKRDALEDILSEIVKKDISIHVQEILEKWEECQPKKEAAQPATDVDSKLAKLLESQT 359
TV EK +E ++KD+++ VQE+ E + + E+ +PA DVD L+ L E +
Sbjct: 505 TVSEKSRIME------LEKDLALRVQEVAE----LRRRLESNKPAGDVDMSLSLLQEISS 554
Query: 360 LATTTRREYTDEEKKI 407
L TD +++I
Sbjct: 555 LQEKLEVTRTDHQREI 570
>BC117209-1|AAI17210.1| 1438|Homo sapiens CLIP1 protein protein.
Length = 1438
Score = 33.5 bits (73), Expect = 0.98
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 180 TVDEKRDALEDILSEIVKKDISIHVQEILEKWEECQPKKEAAQPATDVDSKLAKLLESQT 359
TV EK +E ++KD+++ VQE+ E + + E+ +PA DVD L+ L E +
Sbjct: 505 TVSEKSRIME------LEKDLALRVQEVAE----LRRRLESNKPAGDVDMSLSLLQEISS 554
Query: 360 LATTTRREYTDEEKKI 407
L TD +++I
Sbjct: 555 LQEKLEVTRTDHQREI 570
>BC114213-1|AAI14214.1| 1392|Homo sapiens CAP-GLY domain containing
linker protein 1 protein.
Length = 1392
Score = 33.5 bits (73), Expect = 0.98
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 180 TVDEKRDALEDILSEIVKKDISIHVQEILEKWEECQPKKEAAQPATDVDSKLAKLLESQT 359
TV EK +E ++KD+++ VQE+ E + + E+ +PA DVD L+ L E +
Sbjct: 459 TVSEKSRIME------LEKDLALRVQEVAE----LRRRLESNKPAGDVDMSLSLLQEISS 508
Query: 360 LATTTRREYTDEEKKI 407
L TD +++I
Sbjct: 509 LQEKLEVTRTDHQREI 524
>BC062543-1|AAH62543.1| 653|Homo sapiens CLIP1 protein protein.
Length = 653
Score = 33.5 bits (73), Expect = 0.98
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 180 TVDEKRDALEDILSEIVKKDISIHVQEILEKWEECQPKKEAAQPATDVDSKLAKLLESQT 359
TV EK +E ++KD+++ VQE+ E + + E+ +PA DVD L+ L E +
Sbjct: 494 TVSEKSRIME------LEKDLALRVQEVAE----LRRRLESNKPAGDVDMSLSLLQEISS 543
Query: 360 LATTTRREYTDEEKKI 407
L TD +++I
Sbjct: 544 LQEKLEVTRTDHQREI 559
>AB209115-1|BAD92352.1| 1065|Homo sapiens restin isoform a variant
protein.
Length = 1065
Score = 33.5 bits (73), Expect = 0.98
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 180 TVDEKRDALEDILSEIVKKDISIHVQEILEKWEECQPKKEAAQPATDVDSKLAKLLESQT 359
TV EK +E ++KD+++ VQE+ E + + E+ +PA DVD L+ L E +
Sbjct: 245 TVSEKSRIME------LEKDLALRVQEVAE----LRRRLESNKPAGDVDMSLSLLQEISS 294
Query: 360 LATTTRREYTDEEKKI 407
L TD +++I
Sbjct: 295 LQEKLEVTRTDHQREI 310
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,976,921
Number of Sequences: 237096
Number of extensions: 1766858
Number of successful extensions: 5693
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5682
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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