Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_G19
(865 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65360.1 68418.m08221 histone H3 identical to histone H3 from... 252 3e-67
At5g10400.1 68418.m01206 histone H3 identical to several histone... 252 3e-67
At5g10390.1 68418.m01205 histone H3 identical to histone H3 from... 252 3e-67
At3g27360.1 68416.m03421 histone H3 identical to histone H3 from... 252 3e-67
At1g09200.1 68414.m01027 histone H3 identical to histone H3 from... 252 3e-67
At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2, M... 251 5e-67
At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,... 251 5e-67
At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,... 251 5e-67
At1g75600.1 68414.m08784 histone H3.2, putative strong similarit... 241 4e-64
At5g65350.1 68418.m08220 histone H3 nearly identical to histone ... 241 6e-64
At1g13370.1 68414.m01554 histone H3, putative strong similarity ... 239 2e-63
At1g19890.1 68414.m02494 histone H3, putative similar to histone... 225 4e-59
At5g12910.1 68418.m01481 histone H3, putative similar to histone... 181 6e-46
At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12) si... 106 2e-23
At5g57610.1 68418.m07197 protein kinase family protein similar t... 31 0.99
At5g03280.1 68418.m00277 ethylene-insensitive 2 (EIN2) identical... 29 4.0
At1g52410.1 68414.m05914 caldesmon-related weak similarity to Ca... 29 4.0
At2g20150.1 68415.m02356 expressed protein and genefinder 29 5.3
At2g31070.1 68415.m03791 TCP family transcription factor, putati... 28 7.0
At1g77855.1 68414.m09073 hypothetical protein 28 7.0
At5g62810.1 68418.m07884 peroxisomal protein (PEX14) identical t... 28 9.2
At5g38530.1 68418.m04659 tryptophan synthase-related low similar... 28 9.2
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 28 9.2
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 28 9.2
At3g05165.2 68416.m00563 sugar transporter, putative similar to ... 28 9.2
At3g05165.1 68416.m00562 sugar transporter, putative similar to ... 28 9.2
At1g52410.2 68414.m05915 caldesmon-related weak similarity to Ca... 28 9.2
>At5g65360.1 68418.m08221 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 252 bits (616), Expect = 3e-67
Identities = 123/127 (96%), Positives = 126/127 (99%)
Frame = +2
Query: 164 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 343
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 344 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 523
LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 524 MPKDIQL 544
MPKDIQL
Sbjct: 121 MPKDIQL 127
>At5g10400.1 68418.m01206 histone H3 identical to several histone H3
proteins, including Zea mays SP|P05203, Medicago sativa
GI:166384, Encephalartos altensteinii SP|P08903, Pisum
sativum SP|P02300; contains Pfam profile PF00125 Core
histone H2A/H2B/H3/H4
Length = 136
Score = 252 bits (616), Expect = 3e-67
Identities = 123/127 (96%), Positives = 126/127 (99%)
Frame = +2
Query: 164 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 343
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 344 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 523
LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 524 MPKDIQL 544
MPKDIQL
Sbjct: 121 MPKDIQL 127
>At5g10390.1 68418.m01205 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 252 bits (616), Expect = 3e-67
Identities = 123/127 (96%), Positives = 126/127 (99%)
Frame = +2
Query: 164 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 343
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 344 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 523
LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 524 MPKDIQL 544
MPKDIQL
Sbjct: 121 MPKDIQL 127
>At3g27360.1 68416.m03421 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 252 bits (616), Expect = 3e-67
Identities = 123/127 (96%), Positives = 126/127 (99%)
Frame = +2
Query: 164 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 343
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 344 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 523
LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 524 MPKDIQL 544
MPKDIQL
Sbjct: 121 MPKDIQL 127
>At1g09200.1 68414.m01027 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 252 bits (616), Expect = 3e-67
Identities = 123/127 (96%), Positives = 126/127 (99%)
Frame = +2
Query: 164 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 343
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 344 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 523
LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 524 MPKDIQL 544
MPKDIQL
Sbjct: 121 MPKDIQL 127
>At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2,
MINOR, Medicago sativa, SWISSPROT:P11105, histone H3
variant H3.3 Lycopersicon esculentum GI:1435157;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 251 bits (614), Expect = 5e-67
Identities = 122/127 (96%), Positives = 125/127 (98%)
Frame = +2
Query: 164 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 343
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 344 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 523
LLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 524 MPKDIQL 544
MPKDIQL
Sbjct: 121 MPKDIQL 127
>At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 251 bits (614), Expect = 5e-67
Identities = 122/127 (96%), Positives = 125/127 (98%)
Frame = +2
Query: 164 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 343
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 344 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 523
LLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 524 MPKDIQL 544
MPKDIQL
Sbjct: 121 MPKDIQL 127
>At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 251 bits (614), Expect = 5e-67
Identities = 122/127 (96%), Positives = 125/127 (98%)
Frame = +2
Query: 164 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 343
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 344 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 523
LLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 524 MPKDIQL 544
MPKDIQL
Sbjct: 121 MPKDIQL 127
>At1g75600.1 68414.m08784 histone H3.2, putative strong similarity
to histone H3.2 SP|P11105 GI:417103 from Lolium
temulentum, histone H3.2 from Mus pahari GI:515005;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 241 bits (590), Expect = 4e-64
Identities = 117/127 (92%), Positives = 122/127 (96%)
Frame = +2
Query: 164 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 343
MARTKQTARKS GGKAPR LATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSHGGKAPRTLLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 344 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 523
LLIRKLPFQRLVREIAQD+KTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDYKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 524 MPKDIQL 544
MPKD+QL
Sbjct: 121 MPKDVQL 127
>At5g65350.1 68418.m08220 histone H3 nearly identical to histone H3
from Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 139
Score = 241 bits (589), Expect = 6e-64
Identities = 117/127 (92%), Positives = 124/127 (97%)
Frame = +2
Query: 164 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 343
MARTKQTAR STGGKAPRKQLA KAAR+SAPATGGVKKPHR+RPGTVALR+IR+YQKSTE
Sbjct: 1 MARTKQTARISTGGKAPRKQLAPKAARQSAPATGGVKKPHRFRPGTVALRDIRKYQKSTE 60
Query: 344 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 523
+LIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 ILIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 524 MPKDIQL 544
MPK+IQL
Sbjct: 121 MPKEIQL 127
>At1g13370.1 68414.m01554 histone H3, putative strong similarity to
Histone H3.2, minor Medicago sativa SP|P11105, histone
H3 Rubus idaeus GI:10732809; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 239 bits (585), Expect = 2e-63
Identities = 116/127 (91%), Positives = 122/127 (96%)
Frame = +2
Query: 164 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 343
MARTKQ+ARKS GGKAP KQLATKAARKSAP TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQSARKSHGGKAPTKQLATKAARKSAPTTGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 344 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 523
LL RKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLNRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 524 MPKDIQL 544
MPKD+QL
Sbjct: 121 MPKDVQL 127
>At1g19890.1 68414.m02494 histone H3, putative similar to histone H3
from Chlamydomonas reinhardtii GI:571470, Volvox carteri
SP|P08437, histone H3.2 minor from Lolium temulentum
SP|P11105; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 137
Score = 225 bits (549), Expect = 4e-59
Identities = 111/128 (86%), Positives = 119/128 (92%), Gaps = 1/128 (0%)
Frame = +2
Query: 164 MARTKQTARKSTGGKAPRKQLATKAARKSA-PATGGVKKPHRYRPGTVALREIRRYQKST 340
MARTKQTARKSTGGK PRK+LATKAARK+ P GGVK+ HR+RPGTVALREIR+YQKST
Sbjct: 1 MARTKQTARKSTGGKGPRKELATKAARKTRRPYRGGVKRAHRFRPGTVALREIRKYQKST 60
Query: 341 ELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVT 520
+LLIRKLPFQRLVREIAQDFK DLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVT
Sbjct: 61 DLLIRKLPFQRLVREIAQDFKVDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 120
Query: 521 IMPKDIQL 544
IM KDIQL
Sbjct: 121 IMSKDIQL 128
>At5g12910.1 68418.m01481 histone H3, putative similar to histone H3
from Mus musculus GI:51301, Gallus gallus GI:211859,
Medicago sativa GI:166384, Pisum sativum SP|P02300;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 131
Score = 181 bits (440), Expect = 6e-46
Identities = 89/127 (70%), Positives = 107/127 (84%)
Frame = +2
Query: 164 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 343
MAR+ QTARK+TGGKAP A + + S P +KKP+RY+PGTVALREIR+YQK+T+
Sbjct: 1 MARSNQTARKATGGKAPH--FAMRVWQHSTPP---LKKPYRYKPGTVALREIRKYQKTTD 55
Query: 344 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 523
L+IRKLPFQRLV+EIAQ K DLRFQ+ AV ALQEA+EA++VG+FEDTNLCA+HAKR TI
Sbjct: 56 LVIRKLPFQRLVKEIAQSLKADLRFQTGAVSALQEAAEAFMVGMFEDTNLCAMHAKRSTI 115
Query: 524 MPKDIQL 544
MPKDIQL
Sbjct: 116 MPKDIQL 122
>At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12)
similar to histone H3 GB:X17141 GI:10795 from
Tetrahymena pyriformis, GI:161790 from Tetrahymena
thermophila; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 178
Score = 106 bits (254), Expect = 2e-23
Identities = 61/126 (48%), Positives = 80/126 (63%), Gaps = 2/126 (1%)
Frame = +2
Query: 173 TKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLI 352
T+QT ++ R+ K +R++ P G KK +RYRPGTVAL+EIR +QK T LLI
Sbjct: 45 TQQTNPTTSPATGTRR--GAKRSRQAMPR-GSQKKSYRYRPGTVALKEIRHFQKQTNLLI 101
Query: 353 RKLPFQRLVREIAQDFKTDL--RFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 526
F R VR I R+ + A++ALQEA+E YLVGLF D+ LCAIHA+RVT+M
Sbjct: 102 PAASFIREVRSITHMLAPPQINRWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTLM 161
Query: 527 PKDIQL 544
KD +L
Sbjct: 162 RKDFEL 167
>At5g57610.1 68418.m07197 protein kinase family protein similar to
protein kinase [Glycine max] GI:170047, MAP3K delta-1
protein kinase [Arabidopsis thaliana] GI:2253010;
contains Pfam profile: PF00069 Eukaryotic protein kinase
domain
Length = 1054
Score = 31.1 bits (67), Expect = 0.99
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -3
Query: 467 PDTPRWLPAGPSPPNSENGDRS*SLELSHGRDAGKAVCES-RVP 339
PD+ W+PAG PP S+ G L G G CE+ RVP
Sbjct: 301 PDSVVWVPAGAMPPESKGGFPGNVLHGGPGGYEGGNGCENCRVP 344
>At5g03280.1 68418.m00277 ethylene-insensitive 2 (EIN2) identical to
EIN2 [Arabidopsis thaliana] gi|5231113|gb|AAD41076;
member of the natural resistance-associated macrophage
protein (NRAMP) metal transporter family, PMID:11500563;
metal transport capacity has not been shown,
PMID:11500563, PMID:1038174
Length = 1294
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/83 (28%), Positives = 33/83 (39%)
Frame = +1
Query: 280 SSLQARDGRPS*DSSLPEEHGTLDSQTAFPASRP*DSSRLQDRSPFSEFGGDGPAGSQRG 459
S+L +R G PS + + G + P S + L R PF +FG + G
Sbjct: 972 SNLGSRVGVPSTYDDISQSRGGYRDAYSLPQSATTGTGSLWSRQPFEQFG----VAERNG 1027
Query: 460 VSGRSLRGHEPLRYSRETCDNNA 528
G LR R + DNNA
Sbjct: 1028 AVGEELRN----RSNPINIDNNA 1046
>At1g52410.1 68414.m05914 caldesmon-related weak similarity to
Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus]
Length = 755
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 469 RSLRGHEPLRYSRETCDNNAKRHTARPQN 555
R G E LR S T DNN + H A+ Q+
Sbjct: 267 REFEGLEQLRASDSTADNNEEEHAAKGQS 295
>At2g20150.1 68415.m02356 expressed protein and genefinder
Length = 93
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 457 LAGFLQGHHRRTLKTEIGLEVLSYLTDETLE 365
L G G R+T+ E+G VL + D+T++
Sbjct: 58 LEGLASGRQRQTMSGEVGFGVLKAIDDQTIQ 88
>At2g31070.1 68415.m03791 TCP family transcription factor, putative
similar to TCP1 protein (GI:20269127) {Lupinus albus}
and cycloidea (GI:12002867) [Lycopersicon esculentum]
Length = 361
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -1
Query: 607 NQSINWSSTNNLRTFTSDSAGELYVFWHYCHTFRVNSAKVRVLEETDQIRLAGFLQGHH 431
N ++ TNN T D+ G + + H+ T +S+ +E ++ GF+ HH
Sbjct: 191 NNTVVVPETNNFTTTHFDTFGRISGWNHHDLTMTSSSSSEHQQQEQEERSNGGFMVNHH 249
>At1g77855.1 68414.m09073 hypothetical protein
Length = 317
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = -1
Query: 556 DSAGELYVFWHYCHTFRVNSAKVRVLEE--TDQIRLAGFLQGH--HRRTLKTEIGLEVLS 389
D E W CH + + + +E + I + L GH HRR L +I +V+
Sbjct: 70 DYMDETSKLWDVCHVIK---SAISTIESFCSSAISITSTLDGHYHHRRLLSPQISRQVIR 126
Query: 388 YLTDETLERQFANQEFRALL 329
++ E +E RAL+
Sbjct: 127 AISGCRREAVGIEEENRALM 146
>At5g62810.1 68418.m07884 peroxisomal protein (PEX14) identical to
PEX14 [Arabidopsis thaliana] GI:11094252; contains Pfam
profile PF04695: Peroxisomal membrane anchor protein
(Pex14p) conserved region; supporting cDNA
gi|11094253|dbj|AB037539.1|
Length = 507
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 328 PEEHGTLDSQTAFPASRP*DSSRLQDRSPFSEFGGDGPAG 447
P+ +D + A + S LQ + FSE GGDG G
Sbjct: 448 PKPQAKIDQEAAASDGQSGVSDELQKITKFSESGGDGSGG 487
>At5g38530.1 68418.m04659 tryptophan synthase-related low similarity
to tryptophan synthases, beta subunit, from Lactococcus
lactis [SP|Q01998], Pyrococcus kodakaraensis
[SP|Q9YGB0], Thermus thermophilus [SP|P16609]; contains
Pfam pyridoxal-phosphate dependent enzyme domain PF00291
Length = 506
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 150 ELVSKWRVPNRLLVSRPEVKLLASNWRPRPLVRAHRQQEV 269
EL+ + R + EV + WRP PL+RA R +++
Sbjct: 106 ELIKQEATQERFIDIPEEVLEIYKLWRPTPLIRAKRLEKL 145
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 27.9 bits (59), Expect = 9.2
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 135 VRLRRELVSKWRVPNRLLVSRPEVKLLASNWRPRPLVRAHRQQEVSRSLIVTG---PGRS 305
+RL R +S+ V R +SR V + RPR R++ +SRS G GR
Sbjct: 624 IRLSRRSISRSPVRGRRRISRSPVPARRRSVRPRS-PPPDRRRSLSRSASPNGRIRRGRG 682
Query: 306 PFVRFVVTRRARNS 347
RF RR R S
Sbjct: 683 FSQRFSYARRYRTS 696
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 183 LLVSRPEVKLLASNWRPRPLVRAHRQQ 263
LL+ RPE+ LLA+N P P + R++
Sbjct: 451 LLLDRPELLLLATNGSPEPTTMSPRRR 477
>At3g05165.2 68416.m00563 sugar transporter, putative similar to
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 467
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -1
Query: 487 RVLEETDQIRLAGFLQGHHRRTLKTEIGLEVLSYLTDETLERQFANQEFR 338
++LEE + + Q +RRTL IGL ++ L+ + ++N FR
Sbjct: 244 KMLEEDSKSSFSDMFQKKYRRTLVVGIGLMLIQQLSGASGITYYSNAIFR 293
>At3g05165.1 68416.m00562 sugar transporter, putative similar to
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 467
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -1
Query: 487 RVLEETDQIRLAGFLQGHHRRTLKTEIGLEVLSYLTDETLERQFANQEFR 338
++LEE + + Q +RRTL IGL ++ L+ + ++N FR
Sbjct: 244 KMLEEDSKSSFSDMFQKKYRRTLVVGIGLMLIQQLSGASGITYYSNAIFR 293
>At1g52410.2 68414.m05915 caldesmon-related weak similarity to
Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus]
Length = 759
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 478 RGHEPLRYSRETCDNNAKRHTARPQN 555
+G E LR S T DNN + H A+ Q+
Sbjct: 274 KGLEQLRASDSTADNNEEEHAAKGQS 299
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,228,227
Number of Sequences: 28952
Number of extensions: 277381
Number of successful extensions: 850
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2019160800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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