Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G18
         (894 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67735-1|CAN86576.1|  404|Caenorhabditis elegans Hypothetical pr...    33   0.28 
Z32681-3|CAD88217.1|  685|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AC084197-15|AAN63425.1|  391|Caenorhabditis elegans Hypothetical...    31   1.5  
AC084197-14|AAM44396.1|  526|Caenorhabditis elegans Hypothetical...    31   1.5  
AC084197-13|AAM44395.1|  571|Caenorhabditis elegans Hypothetical...    31   1.5  
Z79756-9|CAK12562.1|  830|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z79756-8|CAB02122.1|  891|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z79756-7|CAK12561.1|  855|Caenorhabditis elegans Hypothetical pr...    30   2.6  
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    29   4.5  
Z81484-11|CAB03969.2|  365|Caenorhabditis elegans Hypothetical p...    29   5.9  
Z54235-1|CAA90971.1|  416|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z82272-7|CAB05217.1|  280|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z11115-11|CAA77447.1|  161|Caenorhabditis elegans Hypothetical p...    28   7.8  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    28   7.8  
AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical...    28   7.8  
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical...    28   7.8  

>Z67735-1|CAN86576.1|  404|Caenorhabditis elegans Hypothetical
           protein C15A7.4 protein.
          Length = 404

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 187 FLAVSTMMATGYKINGTQYCFFLRATHFLISSK 89
           FL ++ +   GY I G  YCFF+   H L  SK
Sbjct: 289 FLIIAGLFPNGYSIFGYAYCFFVEVMHGLYVSK 321


>Z32681-3|CAD88217.1|  685|Caenorhabditis elegans Hypothetical
           protein F56F3.2b protein.
          Length = 685

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 22/79 (27%), Positives = 34/79 (43%)
 Frame = -2

Query: 863 HRLLLEVVHVTFVFSSTRGTAKXRDSILAWRLRISSPAMFTFCLTVCRPVISSLYFLSV* 684
           HR +     ++FV+    G  K  +++L WR+      +    L V  P+I  LYF S  
Sbjct: 568 HRPMWSFALLSFVYLCHHGAFKWLNALLEWRVFAPLSKVTWIALVVAEPII--LYFFSSL 625

Query: 683 GWATYGVPIAF*MTSISKA 627
               Y    +   T+IS A
Sbjct: 626 NKPAYATHWSTMYTAISTA 644


>AC084197-15|AAN63425.1|  391|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5c protein.
          Length = 391

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 505 RRSSESPGRVR*RTNAAGPPAPRSISCSRSKT-PGNASLRSGNDPRISF 362
           RRS  +  RV    +AA PP P S S S  ++    A +R+ + PR SF
Sbjct: 264 RRSEGTSTRVESAASAAAPPPPPSSSSSSKRSHEAAARIRAPSPPRRSF 312


>AC084197-14|AAM44396.1|  526|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5b protein.
          Length = 526

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 505 RRSSESPGRVR*RTNAAGPPAPRSISCSRSKT-PGNASLRSGNDPRISF 362
           RRS  +  RV    +AA PP P S S S  ++    A +R+ + PR SF
Sbjct: 399 RRSEGTSTRVESAASAAAPPPPPSSSSSSKRSHEAAARIRAPSPPRRSF 447


>AC084197-13|AAM44395.1|  571|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5a protein.
          Length = 571

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 505 RRSSESPGRVR*RTNAAGPPAPRSISCSRSKT-PGNASLRSGNDPRISF 362
           RRS  +  RV    +AA PP P S S S  ++    A +R+ + PR SF
Sbjct: 444 RRSEGTSTRVESAASAAAPPPPPSSSSSSKRSHEAAARIRAPSPPRRSF 492


>Z79756-9|CAK12562.1|  830|Caenorhabditis elegans Hypothetical
           protein F53C11.5c protein.
          Length = 830

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +3

Query: 381 FPDRSEALPGVLD-REQDMDRGAGGPAAFVRQR-TRPGDSDERRSDAVPGHVRYEDEAPR 554
           F  RSEAL  V+D  +++   G GG A F +QR  +  D D+  SD+         ++PR
Sbjct: 347 FDARSEALTFVIDTSKRNNGGGYGGQARFQQQRVVQYSDDDDSDSDSEFMDQYANSQSPR 406

Query: 555 SGEEL 569
             + L
Sbjct: 407 PSQPL 411


>Z79756-8|CAB02122.1|  891|Caenorhabditis elegans Hypothetical
           protein F53C11.5b protein.
          Length = 891

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +3

Query: 381 FPDRSEALPGVLD-REQDMDRGAGGPAAFVRQR-TRPGDSDERRSDAVPGHVRYEDEAPR 554
           F  RSEAL  V+D  +++   G GG A F +QR  +  D D+  SD+         ++PR
Sbjct: 408 FDARSEALTFVIDTSKRNNGGGYGGQARFQQQRVVQYSDDDDSDSDSEFMDQYANSQSPR 467

Query: 555 SGEEL 569
             + L
Sbjct: 468 PSQPL 472


>Z79756-7|CAK12561.1|  855|Caenorhabditis elegans Hypothetical
           protein F53C11.5a protein.
          Length = 855

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +3

Query: 381 FPDRSEALPGVLD-REQDMDRGAGGPAAFVRQR-TRPGDSDERRSDAVPGHVRYEDEAPR 554
           F  RSEAL  V+D  +++   G GG A F +QR  +  D D+  SD+         ++PR
Sbjct: 372 FDARSEALTFVIDTSKRNNGGGYGGQARFQQQRVVQYSDDDDSDSDSEFMDQYANSQSPR 431

Query: 555 SGEEL 569
             + L
Sbjct: 432 PSQPL 436


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 27/99 (27%), Positives = 32/99 (32%), Gaps = 6/99 (6%)
 Frame = +3

Query: 486 GDSDERRSDAVPGHVRYED--EAPRS----GEELPHAVQSRPPGVVRLHEALSRLRDGGH 647
           G S   R     GH R+     +PR     G    H  +S  PG    H      R G H
Sbjct: 275 GGSGHHRGGRHGGHGRHGSCSGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGRH 334

Query: 648 SERDGHSVRGPASHREEVQRADHGPADCKAEGEHSRRGN 764
                H  R  +          HGP  C   G H R G+
Sbjct: 335 GGHGRHGSRSGSPGGRHGHGGRHGPPHC--PGRHGRHGS 371


>Z81484-11|CAB03969.2|  365|Caenorhabditis elegans Hypothetical
           protein C47A10.4 protein.
          Length = 365

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = -2

Query: 575 MWKFFAASRSFIFVTNMSGDSIRSAFV*ISWTSSLTNERCWSSGSAVHILLSIQDARQCL 396
           +W     SRSF+F+   S D ++S    + W + L   R       VH LL I   R   
Sbjct: 89  LWLELVVSRSFVFIFQWSSDGLQSRSGLLFWAALL---RYHYMFFGVHTLLCITAERAMA 145

Query: 395 TSIGK 381
           T + K
Sbjct: 146 TILLK 150


>Z54235-1|CAA90971.1|  416|Caenorhabditis elegans Hypothetical
           protein C09G9.1 protein.
          Length = 416

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 17/63 (26%), Positives = 24/63 (38%)
 Frame = +3

Query: 369 IRGSFPDRSEALPGVLDREQDMDRGAGGPAAFVRQRTRPGDSDERRSDAVPGHVRYEDEA 548
           + G    R+    G+LD      RG+  PA  V  R +        ++  P    Y  E 
Sbjct: 145 LSGYLLSRAAKYMGILDHRSS--RGSVSPARSVLSRRQTASRSSHAAEVTPPPASYAPET 202

Query: 549 PRS 557
           PRS
Sbjct: 203 PRS 205


>Z82272-7|CAB05217.1|  280|Caenorhabditis elegans Hypothetical
           protein F55G11.10 protein.
          Length = 280

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = -1

Query: 822 FKHSWYCKXQGFN--IGLEAADFLAGYVHLLP-YSLQARDQL 706
           FKHS+YC  +G       +AA  L  +    P Y+L+ RD++
Sbjct: 168 FKHSYYCGCRGMEKVPPTQAASVLMNFYEATPYYNLKYRDEI 209


>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
           protein C09G5.8 protein.
          Length = 1531

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 23/115 (20%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
 Frame = +1

Query: 472 NELVQEIQTN-ADLMLSPDMFVTKMKLLEAAKNFHMQYSHAPQELYAYM---RRCLALEM 639
           ++L+Q++    AD++ S D+ + ++  L A++N   ++     ELY  +   R  L ++ 
Sbjct: 609 DDLLQKLYKEVADILHSHDVGIAEINTLGASENSLARWQKLYSELYEELEKVRNMLLIQY 668

Query: 640 EVIQNAMGTPYVAQPHTERKYSELITGLQTVRQKVNIAGEEIRSLQANIESLXFA 804
           ++ Q  M    + +   +R  +     L   R++V    ++I  L+  I ++ ++
Sbjct: 669 DINQKQMKEIKLLKDELDRLKTVSAEILSKSREEVEERQKKIFMLEEQIRTIAYS 723


>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
           protein C09G5.8 protein.
          Length = 1531

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 23/115 (20%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
 Frame = +1

Query: 472 NELVQEIQTN-ADLMLSPDMFVTKMKLLEAAKNFHMQYSHAPQELYAYM---RRCLALEM 639
           ++L+Q++    AD++ S D+ + ++  L A++N   ++     ELY  +   R  L ++ 
Sbjct: 609 DDLLQKLYKEVADILHSHDVGIAEINTLGASENSLARWQKLYSELYEELEKVRNMLLIQY 668

Query: 640 EVIQNAMGTPYVAQPHTERKYSELITGLQTVRQKVNIAGEEIRSLQANIESLXFA 804
           ++ Q  M    + +   +R  +     L   R++V    ++I  L+  I ++ ++
Sbjct: 669 DINQKQMKEIKLLKDELDRLKTVSAEILSKSREEVEERQKKIFMLEEQIRTIAYS 723


>Z11115-11|CAA77447.1|  161|Caenorhabditis elegans Hypothetical
           protein ZK637.14 protein.
          Length = 161

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 307 MTLWTRAQQLPPECLQKVR 363
           +TLW  AQQ  P C QKV+
Sbjct: 120 LTLWLEAQQTCPTCRQKVK 138


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = +3

Query: 642 GHSERDGHSVRGPASHREEVQRADHGPADCKAEGEH 749
           GH E  GH    PA H    +   H PA     GEH
Sbjct: 440 GHHESHGHGHHSPAHHGHHGEH-HHAPAHHGHHGEH 474


>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
            protein Y105E8A.26b protein.
          Length = 1133

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = -3

Query: 514  ASDRRSSES--PGRVR*RTNAAGPPAPRSISCSRSKTPGNASLRSGN-DPRI 368
            A D R +E+  P  V  RTN +  PA  SIS + S  P  +S+ S +  PR+
Sbjct: 932  AMDARGAENQTPPVVPARTNGSASPANASISLTVSNVPTGSSIASKSPTPRL 983


>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
            protein Y105E8A.26a protein.
          Length = 1172

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = -3

Query: 514  ASDRRSSES--PGRVR*RTNAAGPPAPRSISCSRSKTPGNASLRSGN-DPRI 368
            A D R +E+  P  V  RTN +  PA  SIS + S  P  +S+ S +  PR+
Sbjct: 971  AMDARGAENQTPPVVPARTNGSASPANASISLTVSNVPTGSSIASKSPTPRL 1022


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,924,676
Number of Sequences: 27780
Number of extensions: 480325
Number of successful extensions: 1508
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)