Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_G17
(929 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0271 + 26836396-26836610,26836793-26836872,26837573-268376... 34 0.19
02_02_0675 + 12845980-12846111,12846211-12846363,12846954-128471... 33 0.32
01_06_0403 - 29060712-29060732,29061260-29061334,29061596-290617... 32 0.75
12_01_0902 - 8772016-8772491,8773277-8773406 31 1.7
10_08_0525 + 18541391-18542461,18542688-18542726 31 1.7
09_04_0291 + 16433097-16433942,16434708-16434851,16435226-164353... 31 1.7
01_07_0035 + 40637102-40637197,40638594-40638948,40639664-406397... 30 2.3
09_04_0637 - 19153136-19153513,19153607-19153759,19153857-191546... 30 3.0
02_01_0421 + 3080801-3081120,3081578-3081663,3081987-3082125,308... 30 3.0
01_06_0631 + 30732091-30732292,30732690-30732870,30732994-307331... 30 3.0
09_01_0023 - 434250-434408,435614-435684,436053-436143,436208-43... 29 4.0
06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187,358... 29 4.0
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365... 29 5.3
01_05_0653 - 23948911-23948937,23949031-23949141,23949361-239494... 29 5.3
06_03_1489 + 30492702-30493760 29 7.0
>05_06_0271 +
26836396-26836610,26836793-26836872,26837573-26837641,
26837694-26837985,26838303-26838399,26838478-26838744,
26838832-26838909,26839019-26839120,26839251-26839300,
26839383-26839482,26839645-26839743,26839840-26839968,
26840319-26840427,26840652-26841055,26841140-26841280,
26841373-26841393
Length = 750
Score = 33.9 bits (74), Expect = 0.19
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 166 TAIKFLLARKFDVGRAHALWRQHEATRRGEGLNKFEPFE 282
T ++FL ARKFDV +A ++W R+ G + E F+
Sbjct: 216 TMLRFLKARKFDVEKAKSMWSDMLKWRKEFGADNIEEFD 254
>02_02_0675 +
12845980-12846111,12846211-12846363,12846954-12847100,
12847372-12847656
Length = 238
Score = 33.1 bits (72), Expect = 0.32
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 280 EDPLKSELETGKFTILPTRDATGAAIAVFTANKHFPSQTTHQTTLQ 417
E+ +K +TGK + + D G + V A+KHFPS T LQ
Sbjct: 108 EESVKGLYQTGKAYVHDSFDIYGRPVLVVVASKHFPSLCYWSTQLQ 153
>01_06_0403 -
29060712-29060732,29061260-29061334,29061596-29061762,
29061841-29061996,29062412-29062535,29062949-29063047,
29063155-29063254,29063331-29063380,29063461-29063562,
29063709-29063786,29063865-29064131,29064225-29064321,
29064446-29064746,29066714-29066805,29066890-29067005,
29067445-29067519,29067846-29067911,29068206-29068262,
29068381-29068430,29068518-29068688,29068969-29069060,
29069124-29069281
Length = 837
Score = 31.9 bits (69), Expect = 0.75
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 172 IKFLLARKFDVGRAHALWRQHEATRRGEGLNKFEPFE 282
++FL ARKFD+ +A +W + R+ G + E F+
Sbjct: 392 LRFLKARKFDIDKAKHMWSEMLRWRKEFGADNIEEFD 428
>12_01_0902 - 8772016-8772491,8773277-8773406
Length = 201
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 564 LSGQIEEGINSDGAALVQGLPSGYFGCSLERSYGNACTRVSAPQL 698
LS + E ++ + +V+GL + FGC L+R RV A +L
Sbjct: 42 LSVRTLEDAEAEASKMVEGLTTAEFGCLLQRQADGRANRVHAGEL 86
>10_08_0525 + 18541391-18542461,18542688-18542726
Length = 369
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +1
Query: 85 CHQNKSWRQKHFLNELSETGAGC----VSRATAIKFLLARKFDVGRAHALWRQ 231
CH+N+S L+ +++ G GC VS +T I LL + D +A+A +R+
Sbjct: 95 CHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLL-KGGDPDKAYATYRE 146
>09_04_0291 +
16433097-16433942,16434708-16434851,16435226-16435390,
16435551-16435562
Length = 388
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +3
Query: 426 VPVGRGLTIAGDSASRPGLHLRHDRLQIHQLRLRAVAENIDYVKGWLSGQIEEGINS 596
+PV +A D A+ + L + ++RLR E + V W++ E+GI S
Sbjct: 60 LPVAAATAVACDKAAIDAILLHQHPGPVQRVRLRVTDELLPGVPAWMASLSEKGIQS 116
>01_07_0035 +
40637102-40637197,40638594-40638948,40639664-40639700,
40639850-40639955,40640086-40640196,40640334-40640468
Length = 279
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +1
Query: 424 VYQLDVALQSLETQRAGLVFIYDMTDSKYTNFDYELSQKILTMLKGGYPAKLKKVLIVTA 603
VY LD + + V I D+ Y+N D + +++ YP +L K L++
Sbjct: 154 VYLLDSICARIPRGQEKFVCIVDLKGWGYSNCDIRAYIAAIEIMQNYYPERLGKALMIHV 213
Query: 604 PLWF 615
P F
Sbjct: 214 PYMF 217
>09_04_0637 -
19153136-19153513,19153607-19153759,19153857-19154675,
19155068-19155174,19155434-19155548
Length = 523
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +3
Query: 513 QLRLRAVAENIDYVKGWLSGQIEEGINSDGAALVQGLPSGYFGCSL 650
+L + +N DYV WL I GI L P F CSL
Sbjct: 147 KLSIHCKLDNCDYVDSWLQFAITPGIEEITVMLSGNKPQFNFPCSL 192
>02_01_0421 +
3080801-3081120,3081578-3081663,3081987-3082125,
3082470-3082554
Length = 209
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +2
Query: 344 PVLPLPCSQRTNTSPHRLRIKQHYRVWCTSWTWPYNRWRLSEPAW 478
P+LP C P LR+ R W ++ TWP R S P W
Sbjct: 62 PLLPARCRHH-GCPPPALRVAAAVRRWTSTLTWP---TRASPPRW 102
>01_06_0631 +
30732091-30732292,30732690-30732870,30732994-30733135,
30733228-30733297,30733383-30733549
Length = 253
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 490 DMTDSKYTNFDYELSQKILTMLKGGYPAKLKKVLIVTAPLW 612
D+T + + YE+++ T+ + G+ LKK LIV A LW
Sbjct: 141 DLTVNIALSLRYEINRGFATLREIGHGRDLKKFLIVIAGLW 181
>09_01_0023 -
434250-434408,435614-435684,436053-436143,436208-436321,
436523-436657,436832-436913,437095-437195,437425-437490
Length = 272
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 746 ARH*SHHLVGILQKLXTXTTFXNSKLDGVIDEYVISTLRRSRNV 877
A H + +G++ L T +F S++ ++D + IS +R +NV
Sbjct: 89 ASHVAARQLGVVMYLDTSNSFSPSRIARIVDGFPISLVREPKNV 132
>06_01_0501 -
3587390-3587528,3587922-3588031,3588122-3588187,
3588293-3588410,3588499-3588554,3588647-3588766,
3588937-3589035,3589443-3589490,3589534-3589545,
3590353-3590418,3591412-3591471,3592061-3592162,
3592405-3592426,3592959-3593041,3593166-3593293,
3593775-3593881,3594376-3594845
Length = 601
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +2
Query: 290 LSQNSKPANLLYCQPEMRPVLPLPCSQRTNTSPHRLRIKQHYRVWCTS--WTWPY 448
++Q K A + PE+ P P P S R+ L K+ + C S W W Y
Sbjct: 177 ITQIKKAAKIGKLLPELPPPFPPPLSGRSFRDQFSLYQKKRRELGCPSFLWNWAY 231
>07_03_0111 + 13535912-13535972,13536081-13536142,13536418-13536510,
13537577-13537649,13537876-13538265,13538337-13538404,
13539334-13539375,13540211-13540735,13540817-13540974,
13541078-13541636,13542438-13542500,13542579-13542680,
13542779-13543096,13543175-13543267,13543489-13543590,
13543678-13543782,13544190-13544323,13545097-13545280,
13545701-13545832,13546215-13546327,13546468-13546558,
13547138-13549339
Length = 1889
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 643 QPKYPEGRP*TKAAPSLLIPSSIWPDNHPL 554
+P + +P A S +P S WP NHP+
Sbjct: 1694 RPNHYGWQPYMNAPSSEFVPGSAWPSNHPV 1723
>01_05_0653 -
23948911-23948937,23949031-23949141,23949361-23949441,
23949865-23949984,23950088-23950252,23950344-23950493,
23950565-23950674,23951401-23951518,23951597-23951827,
23952345-23952524,23953639-23953908,23954930-23954979,
23955213-23955288,23955396-23955483,23956010-23956101,
23956200-23956529,23957484-23957593,23957810-23957907,
23959538-23959566
Length = 811
Score = 29.1 bits (62), Expect = 5.3
Identities = 21/88 (23%), Positives = 41/88 (46%)
Frame = +3
Query: 489 RHDRLQIHQLRLRAVAENIDYVKGWLSGQIEEGINSDGAALVQGLPSGYFGCSLERSYGN 668
+H ++Q+ Q+ L+ A+ + Q ++ ++ DG+ L G+ SG+ G L +
Sbjct: 101 QHQQIQMQQMLLQRAAQQQQQQQQQQQQQ-QQQLHRDGSHLFNGITSGFSGNDLLMRHNP 159
Query: 669 ACTRVSAPQLGAHVPRSILPXQLGGLHD 752
A A ++ + R LP Q L +
Sbjct: 160 AIANAMAVKI--YEERLKLPSQRDSLDE 185
>06_03_1489 + 30492702-30493760
Length = 352
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 206 GGPTRSGGSMRPRVEGRDSTSLNRSRIHLSQNSKP 310
G PT S +PR GR++ ++H + NS P
Sbjct: 121 GPPTTGDASSKPRRRGRETDEEVARKLHRAMNSSP 155
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,456,597
Number of Sequences: 37544
Number of extensions: 523636
Number of successful extensions: 1670
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1668
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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