Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_G17
(929 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M83738-1|AAA60226.1| 593|Homo sapiens protein-tyrosine phosphat... 184 5e-46
BT007405-1|AAP36073.1| 593|Homo sapiens protein tyrosine phosph... 184 5e-46
BC010863-1|AAH10863.1| 593|Homo sapiens protein tyrosine phosph... 184 5e-46
BC071574-1|AAH71574.1| 583|Homo sapiens PTPN9 protein protein. 182 2e-45
Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open readin... 75 3e-13
BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open read... 75 3e-13
AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open read... 75 3e-13
L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding pro... 55 4e-07
J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein. 55 4e-07
BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding p... 55 4e-07
Z97053-5|CAI19685.1| 279|Homo sapiens chromosome 20 open readin... 50 2e-05
AL132772-8|CAI18860.1| 279|Homo sapiens chromosome 20 open read... 50 2e-05
U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer... 48 4e-05
D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer... 48 4e-05
BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha) tran... 48 4e-05
Z97053-4|CAO03543.1| 154|Homo sapiens chromosome 20 open readin... 38 0.069
AL132772-7|CAO03334.1| 154|Homo sapiens chromosome 20 open read... 38 0.069
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 31 4.5
X06269-1|CAA29605.1| 226|Homo sapiens protein ( Human mRNA for ... 31 4.5
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 31 4.5
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 31 4.5
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 31 4.5
S64596-1|AAB27856.1| 284|Homo sapiens type I collagen pro alpha... 31 7.9
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 31 7.9
>M83738-1|AAA60226.1| 593|Homo sapiens protein-tyrosine phosphatase
protein.
Length = 593
Score = 184 bits (447), Expect = 5e-46
Identities = 91/174 (52%), Positives = 120/174 (68%), Gaps = 4/174 (2%)
Frame = +1
Query: 112 KHFLNELS----ETGAGCVSRATAIKFLLARKFDVGRAHALWRQHEATRRGEGLNKFEPF 279
K FL E++ + +S A+KFL+ARKFDV RA L+ + TRR EG+ K +P
Sbjct: 24 KQFLEEINKWTVQYNVSPLSWNVAVKFLMARKFDVLRAIELFHSYRETRRKEGIVKLKPH 83
Query: 280 EDPLKSELETGKFTILPTRDATGAAIAVFTANKHFPSQTTHQTTLQGVVYQLDVALQSLE 459
E+PL+SE+ +GKFTIL RD TGA+IA+FTA H P ++ LQ + Y LD A+ S E
Sbjct: 84 EEPLRSEILSGKFTILNVRDPTGASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFE 143
Query: 460 TQRAGLVFIYDMTDSKYTNFDYELSQKILTMLKGGYPAKLKKVLIVTAPLWFKV 621
TQR GLVFIYDM S Y NF+ +L +K+L +LKG +PA+LKKVLIV AP+WF+V
Sbjct: 144 TQRNGLVFIYDMCGSNYANFELDLGKKVLNLLKGAFPARLKKVLIVGAPIWFRV 197
>BT007405-1|AAP36073.1| 593|Homo sapiens protein tyrosine
phosphatase, non-receptor type 9 protein.
Length = 593
Score = 184 bits (447), Expect = 5e-46
Identities = 91/174 (52%), Positives = 120/174 (68%), Gaps = 4/174 (2%)
Frame = +1
Query: 112 KHFLNELS----ETGAGCVSRATAIKFLLARKFDVGRAHALWRQHEATRRGEGLNKFEPF 279
K FL E++ + +S A+KFL+ARKFDV RA L+ + TRR EG+ K +P
Sbjct: 24 KQFLEEINKWTVQYNVSPLSWNVAVKFLMARKFDVLRAIELFHSYRETRRKEGIVKLKPH 83
Query: 280 EDPLKSELETGKFTILPTRDATGAAIAVFTANKHFPSQTTHQTTLQGVVYQLDVALQSLE 459
E+PL+SE+ +GKFTIL RD TGA+IA+FTA H P ++ LQ + Y LD A+ S E
Sbjct: 84 EEPLRSEILSGKFTILNVRDPTGASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFE 143
Query: 460 TQRAGLVFIYDMTDSKYTNFDYELSQKILTMLKGGYPAKLKKVLIVTAPLWFKV 621
TQR GLVFIYDM S Y NF+ +L +K+L +LKG +PA+LKKVLIV AP+WF+V
Sbjct: 144 TQRNGLVFIYDMCGSNYANFELDLGKKVLNLLKGAFPARLKKVLIVGAPIWFRV 197
>BC010863-1|AAH10863.1| 593|Homo sapiens protein tyrosine
phosphatase, non-receptor type 9 protein.
Length = 593
Score = 184 bits (447), Expect = 5e-46
Identities = 91/174 (52%), Positives = 120/174 (68%), Gaps = 4/174 (2%)
Frame = +1
Query: 112 KHFLNELS----ETGAGCVSRATAIKFLLARKFDVGRAHALWRQHEATRRGEGLNKFEPF 279
K FL E++ + +S A+KFL+ARKFDV RA L+ + TRR EG+ K +P
Sbjct: 24 KQFLEEINKWTVQYNVSPLSWNVAVKFLMARKFDVLRAIELFHSYRETRRKEGIVKLKPH 83
Query: 280 EDPLKSELETGKFTILPTRDATGAAIAVFTANKHFPSQTTHQTTLQGVVYQLDVALQSLE 459
E+PL+SE+ +GKFTIL RD TGA+IA+FTA H P ++ LQ + Y LD A+ S E
Sbjct: 84 EEPLRSEILSGKFTILNVRDPTGASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFE 143
Query: 460 TQRAGLVFIYDMTDSKYTNFDYELSQKILTMLKGGYPAKLKKVLIVTAPLWFKV 621
TQR GLVFIYDM S Y NF+ +L +K+L +LKG +PA+LKKVLIV AP+WF+V
Sbjct: 144 TQRNGLVFIYDMCGSNYANFELDLGKKVLNLLKGAFPARLKKVLIVGAPIWFRV 197
>BC071574-1|AAH71574.1| 583|Homo sapiens PTPN9 protein protein.
Length = 583
Score = 182 bits (442), Expect = 2e-45
Identities = 90/174 (51%), Positives = 120/174 (68%), Gaps = 4/174 (2%)
Frame = +1
Query: 112 KHFLNELS----ETGAGCVSRATAIKFLLARKFDVGRAHALWRQHEATRRGEGLNKFEPF 279
K FL E++ + +S A+KFL+ARKFDV RA L+ + TRR EG+ K +P
Sbjct: 14 KQFLEEINKWTVQYNVSPLSWNVAVKFLMARKFDVLRAIELFHSYRETRRKEGIVKLKPH 73
Query: 280 EDPLKSELETGKFTILPTRDATGAAIAVFTANKHFPSQTTHQTTLQGVVYQLDVALQSLE 459
E+PL+SE+ +GKFTIL RD TGA+IA+FTA H P ++ LQ + Y LD A+ S E
Sbjct: 74 EEPLRSEILSGKFTILNVRDPTGASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFE 133
Query: 460 TQRAGLVFIYDMTDSKYTNFDYELSQKILTMLKGGYPAKLKKVLIVTAPLWFKV 621
TQR GLVFIYDM S Y +F+ +L +K+L +LKG +PA+LKKVLIV AP+WF+V
Sbjct: 134 TQRNGLVFIYDMCGSNYADFELDLGKKVLNLLKGAFPARLKKVLIVGAPIWFRV 187
>Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 75.4 bits (177), Expect = 3e-13
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 5/157 (3%)
Frame = +1
Query: 163 ATAIKFLLARKFDVGRAHALWRQHEATRRG--EGLNKFEPFEDPLKSELETGKFTILPTR 336
A ++FL ARKFD RA L + + RR E N +P LK L +G T+LP
Sbjct: 79 AFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKP--SALKDVLASGFLTVLPHT 136
Query: 337 DATGAAIAVFTANKHFPSQTTHQTTLQGVVYQLDVALQSLETQRAGLVFIYD---MTDSK 507
D G + ++ PS ++ + L+ +QS ETQ G+V + D ++ SK
Sbjct: 137 DPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSK 196
Query: 508 YTNFDYELSQKILTMLKGGYPAKLKKVLIVTAPLWFK 618
++F +++K++ +L+ G+P ++K V +V P FK
Sbjct: 197 ASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFK 233
>BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 75.4 bits (177), Expect = 3e-13
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 5/157 (3%)
Frame = +1
Query: 163 ATAIKFLLARKFDVGRAHALWRQHEATRRG--EGLNKFEPFEDPLKSELETGKFTILPTR 336
A ++FL ARKFD RA L + + RR E N +P LK L +G T+LP
Sbjct: 79 AFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKP--SALKDVLASGFLTVLPHT 136
Query: 337 DATGAAIAVFTANKHFPSQTTHQTTLQGVVYQLDVALQSLETQRAGLVFIYD---MTDSK 507
D G + ++ PS ++ + L+ +QS ETQ G+V + D ++ SK
Sbjct: 137 DPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSK 196
Query: 508 YTNFDYELSQKILTMLKGGYPAKLKKVLIVTAPLWFK 618
++F +++K++ +L+ G+P ++K V +V P FK
Sbjct: 197 ASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFK 233
>AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 75.4 bits (177), Expect = 3e-13
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 5/157 (3%)
Frame = +1
Query: 163 ATAIKFLLARKFDVGRAHALWRQHEATRRG--EGLNKFEPFEDPLKSELETGKFTILPTR 336
A ++FL ARKFD RA L + + RR E N +P LK L +G T+LP
Sbjct: 79 AFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKP--SALKDVLASGFLTVLPHT 136
Query: 337 DATGAAIAVFTANKHFPSQTTHQTTLQGVVYQLDVALQSLETQRAGLVFIYD---MTDSK 507
D G + ++ PS ++ + L+ +QS ETQ G+V + D ++ SK
Sbjct: 137 DPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSK 196
Query: 508 YTNFDYELSQKILTMLKGGYPAKLKKVLIVTAPLWFK 618
++F +++K++ +L+ G+P ++K V +V P FK
Sbjct: 197 ASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFK 233
>L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding
protein protein.
Length = 317
Score = 54.8 bits (126), Expect = 4e-07
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Frame = +1
Query: 172 IKFLLARKFDVGRAHALWRQHEATR--RGEGLNKFEPFEDPLKSELETGKFTILPTRDAT 345
++F+ ARKF+VGRA+ L R + R E + P + ++ +E G +L +RD
Sbjct: 97 LRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSP--EAVRCTIEAGYPGVLSSRDKY 154
Query: 346 GAAIAVFTANKHFPSQTTHQTTLQGVVYQLDVALQSLETQRAGLVFIYD---MTDSKYTN 516
G + +F + T LQ + L+ L++ ETQ G I + T + +
Sbjct: 155 GRVVMLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAAS 214
Query: 517 FDYELSQKILTMLKGGYPAKLKKVLIVTAPLWF 615
+K++ ML+ +PA+ K + + P +F
Sbjct: 215 LRTSDLRKMVDMLQDSFPARFKAIHFIHQPWYF 247
>J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein.
Length = 317
Score = 54.8 bits (126), Expect = 4e-07
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Frame = +1
Query: 172 IKFLLARKFDVGRAHALWRQHEATR--RGEGLNKFEPFEDPLKSELETGKFTILPTRDAT 345
++F+ ARKF+VGRA+ L R + R E + P + ++ +E G +L +RD
Sbjct: 97 LRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSP--EAVRCTIEAGYPGVLSSRDKY 154
Query: 346 GAAIAVFTANKHFPSQTTHQTTLQGVVYQLDVALQSLETQRAGLVFIYD---MTDSKYTN 516
G + +F + T LQ + L+ L++ ETQ G I + T + +
Sbjct: 155 GRVVMLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAAS 214
Query: 517 FDYELSQKILTMLKGGYPAKLKKVLIVTAPLWF 615
+K++ ML+ +PA+ K + + P +F
Sbjct: 215 LRTSDLRKMVDMLQDSFPARFKAIHFIHQPWYF 247
>BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding
protein 1 protein.
Length = 317
Score = 54.8 bits (126), Expect = 4e-07
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Frame = +1
Query: 172 IKFLLARKFDVGRAHALWRQHEATR--RGEGLNKFEPFEDPLKSELETGKFTILPTRDAT 345
++F+ ARKF+VGRA+ L R + R E + P + ++ +E G +L +RD
Sbjct: 97 LRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSP--EAVRCTIEAGYPGVLSSRDKY 154
Query: 346 GAAIAVFTANKHFPSQTTHQTTLQGVVYQLDVALQSLETQRAGLVFIYD---MTDSKYTN 516
G + +F + T LQ + L+ L++ ETQ G I + T + +
Sbjct: 155 GRVVMLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAAS 214
Query: 517 FDYELSQKILTMLKGGYPAKLKKVLIVTAPLWF 615
+K++ ML+ +PA+ K + + P +F
Sbjct: 215 LRTSDLRKMVDMLQDSFPARFKAIHFIHQPWYF 247
>Z97053-5|CAI19685.1| 279|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 279
Score = 49.6 bits (113), Expect = 2e-05
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +1
Query: 163 ATAIKFLLARKFDVGRAHALWRQHEATRRG--EGLNKFEPFEDPLKSELETGKFTILPTR 336
A ++FL ARKFD RA L + + RR E N +P LK L +G T+LP
Sbjct: 79 AFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKP--SALKDVLASGFLTVLPHT 136
Query: 337 DATGAAIAVFTANKHFPSQTTHQTTLQGVVYQLDVALQSLETQ 465
D G + ++ PS ++ + L+ +QS ETQ
Sbjct: 137 DPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQ 179
>AL132772-8|CAI18860.1| 279|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 279
Score = 49.6 bits (113), Expect = 2e-05
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +1
Query: 163 ATAIKFLLARKFDVGRAHALWRQHEATRRG--EGLNKFEPFEDPLKSELETGKFTILPTR 336
A ++FL ARKFD RA L + + RR E N +P LK L +G T+LP
Sbjct: 79 AFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKP--SALKDVLASGFLTVLPHT 136
Query: 337 DATGAAIAVFTANKHFPSQTTHQTTLQGVVYQLDVALQSLETQ 465
D G + ++ PS ++ + L+ +QS ETQ
Sbjct: 137 DPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQ 179
>U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 48.4 bits (110), Expect = 4e-05
Identities = 33/151 (21%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Frame = +1
Query: 172 IKFLLARKFDVGRAHALWRQHEATRRGEGLNKFEPFEDPLKSELETGKFTILPTRDATGA 351
++FL AR FD+ A L + + R + + L+ G +L +RD TG+
Sbjct: 53 LRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGS 112
Query: 352 AIAVFTANKHFPSQTTHQTTLQGVVYQLDVALQSLETQRAGLVFIYDMTDSKYTN---FD 522
+ ++ P T + + ++ +Q +ETQR G+ I+D+ ++++
Sbjct: 113 KVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQIT 172
Query: 523 YELSQKILTMLKGGYPAKLKKVLIVTAPLWF 615
+++KI +L +P K++ + ++ P+ F
Sbjct: 173 PSVAKKIAAVLTDSFPLKVRGIHLINEPVIF 203
>D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 48.4 bits (110), Expect = 4e-05
Identities = 33/151 (21%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Frame = +1
Query: 172 IKFLLARKFDVGRAHALWRQHEATRRGEGLNKFEPFEDPLKSELETGKFTILPTRDATGA 351
++FL AR FD+ A L + + R + + L+ G +L +RD TG+
Sbjct: 53 LRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGS 112
Query: 352 AIAVFTANKHFPSQTTHQTTLQGVVYQLDVALQSLETQRAGLVFIYDMTDSKYTN---FD 522
+ ++ P T + + ++ +Q +ETQR G+ I+D+ ++++
Sbjct: 113 KVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQIT 172
Query: 523 YELSQKILTMLKGGYPAKLKKVLIVTAPLWF 615
+++KI +L +P K++ + ++ P+ F
Sbjct: 173 PSVAKKIAAVLTDSFPLKVRGIHLINEPVIF 203
>BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha)
transfer protein protein.
Length = 278
Score = 48.4 bits (110), Expect = 4e-05
Identities = 33/151 (21%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Frame = +1
Query: 172 IKFLLARKFDVGRAHALWRQHEATRRGEGLNKFEPFEDPLKSELETGKFTILPTRDATGA 351
++FL AR FD+ A L + + R + + L+ G +L +RD TG+
Sbjct: 53 LRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGS 112
Query: 352 AIAVFTANKHFPSQTTHQTTLQGVVYQLDVALQSLETQRAGLVFIYDMTDSKYTN---FD 522
+ ++ P T + + ++ +Q +ETQR G+ I+D+ ++++
Sbjct: 113 KVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQIT 172
Query: 523 YELSQKILTMLKGGYPAKLKKVLIVTAPLWF 615
+++KI +L +P K++ + ++ P+ F
Sbjct: 173 PSVAKKIAAVLTDSFPLKVRGIHLINEPVIF 203
>Z97053-4|CAO03543.1| 154|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 154
Score = 37.5 bits (83), Expect = 0.069
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 163 ATAIKFLLARKFDVGRAHALWRQHEATRRG--EGLNKFEPFEDPLKSELETGKFTILPTR 336
A ++FL ARKFD RA L + + RR E N +P LK L +G T+LP
Sbjct: 79 AFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKP--SALKDVLASGFLTVLPHT 136
Query: 337 DATGAAI 357
D G +
Sbjct: 137 DPRGCHV 143
>AL132772-7|CAO03334.1| 154|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 154
Score = 37.5 bits (83), Expect = 0.069
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 163 ATAIKFLLARKFDVGRAHALWRQHEATRRG--EGLNKFEPFEDPLKSELETGKFTILPTR 336
A ++FL ARKFD RA L + + RR E N +P LK L +G T+LP
Sbjct: 79 AFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKP--SALKDVLASGFLTVLPHT 136
Query: 337 DATGAAI 357
D G +
Sbjct: 137 DPRGCHV 143
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 31.5 bits (68), Expect = 4.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 652 REVTGTRAHGSARRNLARTCRDLS-CPSNWVACTTLITP 765
+++ R+ +R+N ARTCRDL C S+W + I P
Sbjct: 1240 QQIENIRSPEGSRKNPARTCRDLKMCHSDWKSGEYWIDP 1278
>X06269-1|CAA29605.1| 226|Homo sapiens protein ( Human mRNA for
pro-1(I)collagen chain (Col1A1). ).
Length = 226
Score = 31.5 bits (68), Expect = 4.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 652 REVTGTRAHGSARRNLARTCRDLS-CPSNWVACTTLITP 765
+++ R+ +R+N ARTCRDL C S+W + I P
Sbjct: 12 QQIENIRSPEGSRKNPARTCRDLKMCHSDWKSGEYWIDP 50
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 31.5 bits (68), Expect = 4.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 652 REVTGTRAHGSARRNLARTCRDLS-CPSNWVACTTLITP 765
+++ R+ +R+N ARTCRDL C S+W + I P
Sbjct: 1240 QQIENIRSPEGSRKNPARTCRDLKMCHSDWKSGEYWIDP 1278
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 31.5 bits (68), Expect = 4.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 652 REVTGTRAHGSARRNLARTCRDLS-CPSNWVACTTLITP 765
+++ R+ +R+N ARTCRDL C S+W + I P
Sbjct: 1237 QQIENIRSPEGSRKNPARTCRDLKMCHSDWKSGEYWIDP 1275
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 31.5 bits (68), Expect = 4.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 652 REVTGTRAHGSARRNLARTCRDLS-CPSNWVACTTLITP 765
+++ R+ +R+N ARTCRDL C S+W + I P
Sbjct: 1243 QQIENIRSPEGSRKNPARTCRDLKMCHSDWKSGEYWIDP 1281
>S64596-1|AAB27856.1| 284|Homo sapiens type I collagen pro alpha
1(I) chain propeptide protein.
Length = 284
Score = 30.7 bits (66), Expect = 7.9
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 652 REVTGTRAHGSARRNLARTCRDLS-CPSNW 738
+++ R+ R+N ARTCRDL C S+W
Sbjct: 62 QQIENIRSPEGTRKNPARTCRDLKMCHSDW 91
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 30.7 bits (66), Expect = 7.9
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 652 REVTGTRAHGSARRNLARTCRDLS-CPSNWVACTTLITP 765
+++ R+ R+N ARTCRDL C S+W + I P
Sbjct: 816 QQIENIRSPEGXRKNPARTCRDLKMCHSDWKSGEYWIDP 854
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,568,714
Number of Sequences: 237096
Number of extensions: 2798295
Number of successful extensions: 11471
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 10931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11467
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12158972418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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