Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G16
         (933 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    60   2e-11
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.64 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   4.5  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 60.5 bits (140), Expect = 2e-11
 Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
 Frame = +1

Query: 487 DNEIGENG-ETKKPVTYVPPEPTNDETEIFSSTISSGINFDKFDHIAVKVSGENPPRPIE 663
           D + G+ G E KK   Y+PPE  N E ++F+S I++G+NF K D I VKV+G + P PI 
Sbjct: 100 DGDRGDGGGEEKKREFYIPPEVENVE-DLFTSGITTGVNFMKLDEIEVKVTGNDAPPPIT 158

Query: 664 SFE 672
           SFE
Sbjct: 159 SFE 161


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 25.4 bits (53), Expect = 0.64
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +1

Query: 166 PPPPLQNHDSVDEGHSLSRGRGFPSFNEDDEK 261
           P P +  H+        +RG GFP  + D+++
Sbjct: 332 PRPNIDRHEVTRPAAPANRGNGFPKRSSDEQQ 363


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 478 DYEDNEIGENGETKKP 525
           D ++N+ G NGE KKP
Sbjct: 462 DSKNNQDGNNGEKKKP 477


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 478 DYEDNEIGENGETKKP 525
           D ++N+ G NGE KKP
Sbjct: 354 DSKNNQDGNNGEKKKP 369


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +1

Query: 481 YEDNEIGENGETKKPVTYVPPEP-TNDETEIFSSTISSGI 597
           Y+DN   +NG  K PV ++  E  T+     +S   S G+
Sbjct: 643 YQDNVYCKNGGGKLPVRWMALESLTHQRYTTYSDVWSFGV 682


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,889
Number of Sequences: 336
Number of extensions: 2141
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26168549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)