Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G16
         (933 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973...    40   0.003
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009...    39   0.007
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553...    31   1.3  
05_04_0382 + 20796567-20796810,20796894-20797750                       30   2.3  
02_05_1014 + 33510108-33510471,33510857-33511362                       30   3.0  
08_01_0099 + 709377-709493,710055-710099,710482-710553,712413-71...    29   4.0  
01_01_0612 + 4565422-4565481,4565597-4565671,4565760-4566332,456...    29   4.0  
03_01_0218 - 1717246-1717892,1717995-1718163,1718262-1720022,172...    28   9.2  

>11_06_0300 +
           22095396-22096145,22096261-22096344,22097062-22097304,
           22098535-22098702,22098895-22099008,22099378-22099890
          Length = 623

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = +1

Query: 556 DETEIFSSTISSGINFDKFDHIAVKVSGENPPRPIESF 669
           DE E+F +  ++GINFD ++ I V+ SG   P P+ +F
Sbjct: 120 DEPEVFDAHQNTGINFDAYEDIPVETSGREVPPPVGTF 157


>03_06_0365 -
           33399422-33399925,33400470-33400583,33400762-33400929,
           33401305-33401547,33402148-33402231,33402323-33403098,
           33404423-33404636
          Length = 700

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 18/57 (31%), Positives = 32/57 (56%)
 Frame = +1

Query: 499 GENGETKKPVTYVPPEPTNDETEIFSSTISSGINFDKFDHIAVKVSGENPPRPIESF 669
           G +   ++P  +   E   + TE+   T ++GINFD ++ I V+ SG + P P+ +F
Sbjct: 184 GWDRRDREPNPFANSE-AEEATEVDFDTANTGINFDAYEDIPVETSGHDVPPPVNTF 239


>07_01_0725 -
           5532803-5533324,5533631-5533657,5534285-5534398,
           5534564-5534731,5535951-5536193,5537178-5537261,
           5537357-5538117,5539637-5539730,5540633-5540899,
           5541311-5541316,5542538-5542657
          Length = 801

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +1

Query: 541 PEPTNDETEIFSSTISSGINFDKFDHIAVKVSGENPPRPIESF 669
           P   ++  E+     ++GINF+ ++ I V+ SG + P P  +F
Sbjct: 283 PFANSEAAEVDFEGENTGINFEAYEDIPVETSGHDVPPPANTF 325


>05_04_0382 + 20796567-20796810,20796894-20797750
          Length = 366

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 157 VVVPPPPLQNHDSVDEGHSLSRGRGFPSFNEDDEKEN 267
           V  PPPP+    +V  G  +SRG G P +NE    +N
Sbjct: 325 VAAPPPPMMPV-AVRSGRPVSRGGGAPPYNEMHTPKN 360


>02_05_1014 + 33510108-33510471,33510857-33511362
          Length = 289

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 475 NDYEDNEIGENGETKKPVTYVPPEPTNDE 561
           N+   N  G+NG   +P  YVPP+P   E
Sbjct: 172 NNIPPNSGGDNGGGSRPGKYVPPKPRESE 200


>08_01_0099 +
           709377-709493,710055-710099,710482-710553,712413-712484,
           712763-712839,713040-713169,713250-713360,713443-713568
          Length = 249

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 523 PVTYVPPEPTNDETEIFSSTISSGINFDKFDHIAVKVS 636
           P  YVP E  N+  E+F +   S I  +  DH+  K++
Sbjct: 144 PPAYVPEEQLNELEEVFRNARKSDIPTEVPDHLCCKIT 181


>01_01_0612 +
           4565422-4565481,4565597-4565671,4565760-4566332,
           4566438-4566551,4566676-4567377
          Length = 507

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = +1

Query: 118 IVMDDDWDDSCEAVVVPPPPLQNHDSVDEGHSLSRGRGFPSF-NEDDEKENGYGE 279
           +  DDD D       +PP P+ N  S   G +   G G P+  N+     +G G+
Sbjct: 155 VASDDDDDKQASRRALPPMPVLNLSSDSSGDAAGAGAGEPTQPNKASRSSSGGGD 209


>03_01_0218 - 1717246-1717892,1717995-1718163,1718262-1720022,
            1720531-1720610,1720854-1720981,1721004-1721012,
            1723701-1723742,1725891-1726002,1726358-1726514,
            1726678-1726762,1727628-1727713,1727998-1728042
          Length = 1106

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 121  VMDDDWDDSCEAVVVPPPPLQNHDSVDE--GHSLSRGRGFPSFNED 252
            ++D  W+ + +A + PPPP  + +SVDE  G  +S       F ED
Sbjct: 1032 LLDGLWN-TVQAWLAPPPPTDSPNSVDELIGRDMSMSPWNGPFRED 1076


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,129,085
Number of Sequences: 37544
Number of extensions: 236001
Number of successful extensions: 948
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)