Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G13
         (915 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    29   0.20 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.45 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   3.2  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   4.2  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   9.8  

>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 29.1 bits (62), Expect = 0.20
 Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 4/50 (8%)
 Frame = +2

Query: 365 PXKXPXXXPPXXGGXPPXGGXXPPXPPXKKXFXG--GXXPPPXXG--PPP 502
           P K     PP     PP  G  P  P       G  G  PPP  G  PPP
Sbjct: 71  PPKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPP 120



 Score = 25.4 bits (53), Expect = 2.4
 Identities = 17/60 (28%), Positives = 17/60 (28%), Gaps = 2/60 (3%)
 Frame = +3

Query: 363 PPXXXXXXXPXXXGGXPPXGXXP--PPXPPKKKXXXGXXPPPPXGXPPXXGXXXXXXXPP 536
           PP       P      P  G  P  P  PP      G  PPP  G  P          PP
Sbjct: 71  PPKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPTMGMPP 130


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.9 bits (59), Expect = 0.45
 Identities = 17/54 (31%), Positives = 17/54 (31%)
 Frame = +3

Query: 429 PPPXPPKKKXXXGXXPPPPXGXPPXXGXXXXXXXPPXKXPPXGGXXKXXKKXPP 590
           PPP PP         PPPP G PP          P    PP           PP
Sbjct: 581 PPPAPP---------PPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625



 Score = 23.8 bits (49), Expect = 7.4
 Identities = 12/40 (30%), Positives = 12/40 (30%)
 Frame = +2

Query: 365 PXKXPXXXPPXXGGXPPXGGXXPPXPPXKKXFXGGXXPPP 484
           P   P   PP      P GG     PP       G   PP
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -3

Query: 499 GGXPXGGGGXXPXKXFFXGGXGGG 428
           GG P GGGG         GG GGG
Sbjct: 209 GGAPGGGGGSSGGPGPGGGGGGGG 232



 Score = 23.8 bits (49), Expect = 7.4
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -3

Query: 484 GGGGXXPXKXFFXGGXGGGXXPXGG 410
           GGGG         GG  GG  P GG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGG 227


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -2

Query: 485 GGGGXXPPXXFFFXGAGGGXXPXGG 411
           GGGG   P      GAGGG    GG
Sbjct: 840 GGGGAGGPLRGSSGGAGGGSSGGGG 864


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = +2

Query: 389 PPXXGGXPPXGGXXPPXPPXKKXFXGGXXPPPXXGPP 499
           PP      P GG  P   P      GG  P    GPP
Sbjct: 263 PPPIRPPNPMGGPRPQISPQNSNLSGG-MPSGMVGPP 298



 Score = 24.2 bits (50), Expect = 5.6
 Identities = 19/63 (30%), Positives = 19/63 (30%)
 Frame = +3

Query: 405 GXPPXGXXPPPXPPKKKXXXGXXPPPPXGXPPXXGXXXXXXXPPXKXPPXGGXXKXXKKX 584
           G  P G   PP PP      G    PP G  P          P    PP G         
Sbjct: 288 GGMPSGMVGPPRPP-MPMQGGAPGGPPQGMRPNF-YNRPMGDPQTSRPPSGNDNMGG--G 343

Query: 585 PPP 593
           PPP
Sbjct: 344 PPP 346


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 405 GXPPXGXXPPPXPPKKKXXXGXXPPP 482
           G PP    PPP PP      G  P P
Sbjct: 781 GSPP----PPPPPPPSSLSPGGVPRP 802


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,858
Number of Sequences: 2352
Number of extensions: 10809
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99228240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)