Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G12
         (962 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    41   0.054
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    38   0.51 
UniRef50_A5DTK2 Cluster: Putative uncharacterized protein; n=1; ...    36   1.5  
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ...    36   2.0  

>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 40.7 bits (91), Expect = 0.054
 Identities = 19/33 (57%), Positives = 21/33 (63%)
 Frame = +3

Query: 489 RGEXVCVLGALPLPRSXTLCARSFGXGEXYXLT 587
           R   +C  G +PLPRS T  ARSFG GE Y LT
Sbjct: 26  RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58


>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 37.5 bits (83), Expect = 0.51
 Identities = 23/42 (54%), Positives = 23/42 (54%)
 Frame = +2

Query: 518 SXXSXLTDXLRSVXRLXRXVXPHSXAVIXXSPXSXDIARXXM 643
           S  S LTD LRSV RL R V  HS AVI  S  S D A   M
Sbjct: 18  SSASSLTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59


>UniRef50_A5DTK2 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 1046

 Score = 35.9 bits (79), Expect = 1.5
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -3

Query: 111 ICHPGCNCKLVCLYNNVKN 55
           +CHPG NC L C Y N KN
Sbjct: 393 LCHPGFNCNLTCFYQNDKN 411


>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Escherichia
           coli
          Length = 61

 Score = 35.5 bits (78), Expect = 2.0
 Identities = 18/33 (54%), Positives = 18/33 (54%)
 Frame = -1

Query: 647 LTXXFVRYPXIXGXTXLPPXSEXIPLAXAEXPS 549
           LT  F  YP I   T LPP SE  PLA  E PS
Sbjct: 25  LTCSFRLYPLILWITVLPPLSELTPLAAVERPS 57


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,953,561
Number of Sequences: 1657284
Number of extensions: 5825848
Number of successful extensions: 8443
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8440
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 89407040613
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)