Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G12
         (962 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   2.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   2.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   2.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   2.0  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   3.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.5  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 150 WLTSSKALGLGIIICHPGC 94
           WL  +    +G ++C PGC
Sbjct: 786 WLQKATEHVIGCVLCSPGC 804


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 150 WLTSSKALGLGIIICHPGC 94
           WL  +    +G ++C PGC
Sbjct: 786 WLQKATEHVIGCVLCSPGC 804


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 150 WLTSSKALGLGIIICHPGC 94
           WL  +    +G ++C PGC
Sbjct: 786 WLQKATEHVIGCVLCSPGC 804


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 150 WLTSSKALGLGIIICHPGC 94
           WL  +    +G ++C PGC
Sbjct: 786 WLQKATEHVIGCVLCSPGC 804


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3

Query: 150 WLTSSKALGLGIIICHPGC 94
           W+  +    +G ++C PGC
Sbjct: 212 WMQKATEHVIGCVLCSPGC 230


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3

Query: 150 WLTSSKALGLGIIICHPGC 94
           W+  +    +G ++C PGC
Sbjct: 526 WMQKATEHVIGCVLCSPGC 544


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3

Query: 150 WLTSSKALGLGIIICHPGC 94
           W+  +    +G ++C PGC
Sbjct: 759 WMQKATEHVIGCVLCSPGC 777


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3

Query: 150 WLTSSKALGLGIIICHPGC 94
           W+  +    +G ++C PGC
Sbjct: 759 WMQKATEHVIGCVLCSPGC 777


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,599
Number of Sequences: 336
Number of extensions: 1436
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27202879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)