Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G11
         (914 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069832-1|AAL39977.1|  467|Drosophila melanogaster SD07852p pro...   116   6e-26
AE014134-2696|AAN10935.1|  467|Drosophila melanogaster CG4214-PB...   116   6e-26
AE014134-2695|AAF53520.2|  467|Drosophila melanogaster CG4214-PA...   116   6e-26
X78219-1|CAA55064.1|  310|Drosophila melanogaster SED5 protein.       114   2e-25
AY069525-1|AAL39670.1| 1150|Drosophila melanogaster LD24034p pro...    36   0.10 
AE014296-221|AAF47472.1| 1150|Drosophila melanogaster CG2469-PB,...    36   0.10 
AE014296-220|AAN11469.1| 1150|Drosophila melanogaster CG2469-PA,...    36   0.10 
AJ251580-1|CAB63903.1|  529|Drosophila melanogaster Sox100B prot...    29   8.9  
AE014297-4702|AAF57112.2|  529|Drosophila melanogaster CG15552-P...    29   8.9  

>AY069832-1|AAL39977.1|  467|Drosophila melanogaster SD07852p
           protein.
          Length = 467

 Score =  116 bits (278), Expect = 6e-26
 Identities = 58/108 (53%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
 Frame = +2

Query: 434 VMASRDRTSEFISTVRSLQGRFLNKPT-VRDDRKAAVLETYSQFMSMAKVISKNITSTYT 610
           VMA+RDRT EF + +RSLQ R + +   +RD RKA  +++YS+FM +A+ I KNI STY 
Sbjct: 157 VMAARDRTGEFANAIRSLQARNITRAVNIRDPRKAKQVQSYSEFMMVARFIGKNIASTYA 216

Query: 611 XXXXXXXXXXXXXXFDDRPTEIQELTYIIKGDLNSLNQQIARLGEMQE 754
                         FDDRP EIQELTYIIKGDLN+LNQQIARL ++ +
Sbjct: 217 KLEKLTMLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQDISK 264


>AE014134-2696|AAN10935.1|  467|Drosophila melanogaster CG4214-PB,
           isoform B protein.
          Length = 467

 Score =  116 bits (278), Expect = 6e-26
 Identities = 58/108 (53%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
 Frame = +2

Query: 434 VMASRDRTSEFISTVRSLQGRFLNKPT-VRDDRKAAVLETYSQFMSMAKVISKNITSTYT 610
           VMA+RDRT EF + +RSLQ R + +   +RD RKA  +++YS+FM +A+ I KNI STY 
Sbjct: 157 VMAARDRTGEFANAIRSLQARNITRAVNIRDPRKAKQVQSYSEFMMVARFIGKNIASTYA 216

Query: 611 XXXXXXXXXXXXXXFDDRPTEIQELTYIIKGDLNSLNQQIARLGEMQE 754
                         FDDRP EIQELTYIIKGDLN+LNQQIARL ++ +
Sbjct: 217 KLEKLTMLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQDISK 264


>AE014134-2695|AAF53520.2|  467|Drosophila melanogaster CG4214-PA,
           isoform A protein.
          Length = 467

 Score =  116 bits (278), Expect = 6e-26
 Identities = 58/108 (53%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
 Frame = +2

Query: 434 VMASRDRTSEFISTVRSLQGRFLNKPT-VRDDRKAAVLETYSQFMSMAKVISKNITSTYT 610
           VMA+RDRT EF + +RSLQ R + +   +RD RKA  +++YS+FM +A+ I KNI STY 
Sbjct: 157 VMAARDRTGEFANAIRSLQARNITRAVNIRDPRKAKQVQSYSEFMMVARFIGKNIASTYA 216

Query: 611 XXXXXXXXXXXXXXFDDRPTEIQELTYIIKGDLNSLNQQIARLGEMQE 754
                         FDDRP EIQELTYIIKGDLN+LNQQIARL ++ +
Sbjct: 217 KLEKLTMLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQDISK 264


>X78219-1|CAA55064.1|  310|Drosophila melanogaster SED5 protein.
          Length = 310

 Score =  114 bits (274), Expect = 2e-25
 Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 1/107 (0%)
 Frame = +2

Query: 437 MASRDRTSEFISTVRSLQGRFLNKPT-VRDDRKAAVLETYSQFMSMAKVISKNITSTYTX 613
           MA+RDRT EF + +RSLQ R + +   +RD RKA  +++YS+FM +A+ I KNI STY  
Sbjct: 1   MAARDRTGEFANAIRSLQARNITRAVNIRDPRKAKQVQSYSEFMMVARFIGKNIASTYAK 60

Query: 614 XXXXXXXXXXXXXFDDRPTEIQELTYIIKGDLNSLNQQIARLGEMQE 754
                        FDDRP EIQELTYIIKGDLN+LNQQIARL ++ +
Sbjct: 61  LEKLTMLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQDISK 107


>AY069525-1|AAL39670.1| 1150|Drosophila melanogaster LD24034p
           protein.
          Length = 1150

 Score = 35.5 bits (78), Expect = 0.10
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +2

Query: 209 KTEDYNAMLPRRRNIGVTERLLETETDSYNKLDKKGVHYGESRPYENSSNSKSTLILKSS 388
           KTED+  +L   R+   T+   +++ D    LD    HY +    E S + K  L +K++
Sbjct: 55  KTEDFVTLLEESRSDDATKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKRELFMKAT 114

Query: 389 D 391
           +
Sbjct: 115 N 115


>AE014296-221|AAF47472.1| 1150|Drosophila melanogaster CG2469-PB,
           isoform B protein.
          Length = 1150

 Score = 35.5 bits (78), Expect = 0.10
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +2

Query: 209 KTEDYNAMLPRRRNIGVTERLLETETDSYNKLDKKGVHYGESRPYENSSNSKSTLILKSS 388
           KTED+  +L   R+   T+   +++ D    LD    HY +    E S + K  L +K++
Sbjct: 55  KTEDFVTLLEESRSDDATKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKRELFMKAT 114

Query: 389 D 391
           +
Sbjct: 115 N 115


>AE014296-220|AAN11469.1| 1150|Drosophila melanogaster CG2469-PA,
           isoform A protein.
          Length = 1150

 Score = 35.5 bits (78), Expect = 0.10
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +2

Query: 209 KTEDYNAMLPRRRNIGVTERLLETETDSYNKLDKKGVHYGESRPYENSSNSKSTLILKSS 388
           KTED+  +L   R+   T+   +++ D    LD    HY +    E S + K  L +K++
Sbjct: 55  KTEDFVTLLEESRSDDATKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKRELFMKAT 114

Query: 389 D 391
           +
Sbjct: 115 N 115


>AJ251580-1|CAB63903.1|  529|Drosophila melanogaster Sox100B protein
           protein.
          Length = 529

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 21/93 (22%), Positives = 34/93 (36%)
 Frame = +2

Query: 332 SRPYENSSNSKSTLILKSSDQDVFKFLEEFVFEPVMASRDRTSEFISTVRSLQGRFLNKP 511
           S P  +S++  S     SS Q V ++ E   + P  +S  +   F        G     P
Sbjct: 433 SPPLNSSASLSSACSSASSQQPVAEYYEHLGYSPAASSASQNPNFGPQQPYANGAASMTP 492

Query: 512 TVRDDRKAAVLETYSQFMSMAKVISKNITSTYT 610
           T+ D      L++  Q          ++  TYT
Sbjct: 493 TLGDPAPQQELQSQQQEQQHQNPSQHHLWGTYT 525


>AE014297-4702|AAF57112.2|  529|Drosophila melanogaster CG15552-PA
           protein.
          Length = 529

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 21/93 (22%), Positives = 34/93 (36%)
 Frame = +2

Query: 332 SRPYENSSNSKSTLILKSSDQDVFKFLEEFVFEPVMASRDRTSEFISTVRSLQGRFLNKP 511
           S P  +S++  S     SS Q V ++ E   + P  +S  +   F        G     P
Sbjct: 433 SPPLNSSASLSSACSSASSQQPVAEYYEHLGYSPAASSASQNPNFGPQQPYANGAASMTP 492

Query: 512 TVRDDRKAAVLETYSQFMSMAKVISKNITSTYT 610
           T+ D      L++  Q          ++  TYT
Sbjct: 493 TLGDPAPQQELQSQQQEQQHQNPSQHHLWGTYT 525


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,246,436
Number of Sequences: 53049
Number of extensions: 516459
Number of successful extensions: 866
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4484945457
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)