Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G11
         (914 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    27   0.31 
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   6.8  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 22/101 (21%), Positives = 45/101 (44%)
 Frame = +2

Query: 224 NAMLPRRRNIGVTERLLETETDSYNKLDKKGVHYGESRPYENSSNSKSTLILKSSDQDVF 403
           N  + R+R +G+ E     E ++ + L    +  G  R ++  +   + + +KS  +   
Sbjct: 106 NTQITRKRRVGIVENQYAVENNTGSSL--CDLVQGLERLFDEKNAGNNKITMKSKKE--- 160

Query: 404 KFLEEFVFEPVMASRDRTSEFISTVRSLQGRFLNKPTVRDD 526
           +  EE + +PV    + T +   T+R    R L+K    D+
Sbjct: 161 QNAEEDIVDPV--EENETYDEFDTIRIPIVRSLSKSPPNDE 199


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 186 QIITYFHSTFMCVQYLSFHLIDSFQNSMIYLSFK 85
           +I TYF  T  C   L+FH I    N++  L+ +
Sbjct: 328 EISTYFTFTRPCGITLTFHEILKRANTLFVLTLQ 361


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,107
Number of Sequences: 438
Number of extensions: 3636
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29750994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)