Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G10
         (914 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.4  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   3.3  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   4.4  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   4.4  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 732 PSVRSPVPTLPXTGYL 779
           PS+  P P LP TG+L
Sbjct: 155 PSIIDPGPALPPTGFL 170


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +3

Query: 732 PSVRSPVPTLPXTGYL-SAFLP 794
           PS+  P P LP  G+L + +LP
Sbjct: 155 PSIIDPGPALPPAGFLCNNYLP 176


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 272 NFTNKAFFSLH 240
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 272 NFTNKAFFSLH 240
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,511
Number of Sequences: 336
Number of extensions: 2398
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25547951
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)