Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G10
         (914 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    29   0.26 
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    24   5.6  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   9.8  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 28.7 bits (61), Expect = 0.26
 Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 6/79 (7%)
 Frame = +1

Query: 637 PPDEHHKNRRS---SXRW---RNPDRTIKIPGVXPWKLPRCALLFRPCRLPDTCPPFSLR 798
           PP   +  RRS     RW   R+P    +     P   PR     +P RLP    PF   
Sbjct: 251 PPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRPTSWPRSRPTSKPKRLPRRRRPFFFS 310

Query: 799 EAWRFLIAHAVGIXSPVXG 855
             W  ++   +   SPV G
Sbjct: 311 SWWCIIL--VLPCSSPVQG 327


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 631 LRPPDEHHKNRRSSXRWRNPDRTIKIPG 714
           L+P  +H + ++ + R  N D+   IPG
Sbjct: 179 LQPEQQHQRQQQHTVRRHNVDKVEVIPG 206


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 815  RKRHASRREKGGQVSGXRQGRNRRAHRGS 729
            RKR   ++ +  Q  G  + R  +A RGS
Sbjct: 937  RKRKGEKKPRKSQGGGGSRKRKEKARRGS 965


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,049
Number of Sequences: 2352
Number of extensions: 9747
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99228240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)