Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G10
         (914 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.96 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   0.96 
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   8.9  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.96
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 704 RYQAXPPGSSLGALSCSDPAXYRIPVRL 787
           +YQ  P    + + S  DPA YRI  R+
Sbjct: 398 KYQIVPSALEIFSTSMKDPAFYRIYKRI 425


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.96
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 704 RYQAXPPGSSLGALSCSDPAXYRIPVRL 787
           +YQ  P    + + S  DPA YRI  R+
Sbjct: 398 KYQIVPSALEIFSTSMKDPAFYRIYKRI 425


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 812 KRHASRREKGGQVSGXRQGRNRRAH 738
           KR  +++ +G + +     +NRRAH
Sbjct: 39  KRPKTKKSQGSRTTHNELEKNRRAH 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,922
Number of Sequences: 438
Number of extensions: 3386
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29750994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)