Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G10
         (914 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g45050.2 68418.m05524 disease resistance protein-related simi...    29   5.7  
At5g45050.1 68418.m05523 disease resistance protein-related simi...    29   5.7  
At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containi...    29   5.7  
At5g07390.1 68418.m00846 respiratory burst oxidase protein A (Rb...    28   7.5  
At3g50230.1 68416.m05493 leucine-rich repeat transmembrane prote...    28   9.9  

>At5g45050.2 68418.m05524 disease resistance protein-related similar
            to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
            profiles PF03106: WRKY DNA -binding domain, PF00931:
            NB-ARC domain, PF00560: Leucine Rich Repeat
          Length = 1344

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 443  PLPRSLTRCARSFGCGXRYQLTQRR 517
            P PRS  RCA S GC  R Q+ + R
Sbjct: 1169 PYPRSYYRCASSKGCFARKQVERSR 1193


>At5g45050.1 68418.m05523 disease resistance protein-related similar
            to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
            profiles PF03106: WRKY DNA -binding domain, PF00931:
            NB-ARC domain, PF00560: Leucine Rich Repeat
          Length = 1372

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 443  PLPRSLTRCARSFGCGXRYQLTQRR 517
            P PRS  RCA S GC  R Q+ + R
Sbjct: 1197 PYPRSYYRCASSKGCFARKQVERSR 1221


>At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containing
           protein ESTs gb|F20110 and gb|F20109 come from this
           gene; contains Pfam profile PF00515: TPR Domain
          Length = 1558

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -1

Query: 269 FTNKAFFSLHFSCGLS 222
           + N+A F LHF+CGLS
Sbjct: 904 YVNRALFLLHFTCGLS 919


>At5g07390.1 68418.m00846 respiratory burst oxidase protein A
           (RbohA) / NADPH oxidase identical to respiratory burst
           oxidase protein A from Arabidopsis thaliana [gi:3242781]
          Length = 902

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 634 RPPDEHHKNRRSSXRW 681
           RPPDEH  NR  S  W
Sbjct: 667 RPPDEHRLNRADSKHW 682


>At3g50230.1 68416.m05493 leucine-rich repeat transmembrane protein
           kinase, putative receptor-like protein kinase (RKL1),
           Arabidopsis thaliana, EMBL:AF084034
          Length = 660

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 738 VRSPVPTLPXTGYLSAFLPSGSVAL 812
           +R    +LP T Y  +FLPS +VAL
Sbjct: 16  LRISTASLPATNYFDSFLPSDAVAL 40


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,627,062
Number of Sequences: 28952
Number of extensions: 217233
Number of successful extensions: 431
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 431
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2168774904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)