Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G07
         (917 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0140 - 23073032-23073130,23073270-23073338,23073448-230735...    35   0.10 
10_02_0011 + 4148469-4149371,4153358-4153960                           33   0.32 
08_02_0134 - 13021294-13021350,13021478-13021658,13022383-130224...    30   2.2  
11_03_0010 - 8922361-8922375,8923888-8924610                           29   3.9  
05_05_0142 - 22673607-22674134                                         29   5.2  
05_04_0116 + 18131510-18133192                                         29   6.8  

>04_04_0140 -
           23073032-23073130,23073270-23073338,23073448-23073539,
           23073637-23074550,23074646-23074779,23075003-23075058,
           23077556-23077646
          Length = 484

 Score = 34.7 bits (76), Expect = 0.10
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -2

Query: 421 HRAALRSTNARTFGVRVASCGEGFVDPRRAVWWAARLHPI 302
           HR+ L    +      V   GEG  +PRRA WW A  H +
Sbjct: 35  HRSDLSMVTSSVLPKVVDDAGEGEANPRRAKWWYATFHSV 74


>10_02_0011 + 4148469-4149371,4153358-4153960
          Length = 501

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = -3

Query: 636 CRREPRGPRRSP-DRSI*TCGIQPGQRLPGLS---GPTNSYRIGAV 511
           CRR P GPR  P   S+   G QP + L GL+   GP  S R+GAV
Sbjct: 29  CRRLPPGPRPLPFIGSLHLLGDQPHRSLAGLAKKYGPLMSLRLGAV 74


>08_02_0134 -
           13021294-13021350,13021478-13021658,13022383-13022433,
           13025134-13025187,13026154-13026248,13026565-13026888
          Length = 253

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 374 SGQLWGRLRRPSQSSLVGSAAASNRHLSTLCR 279
           SG  WGR    +Q+ LVGS++A     S  CR
Sbjct: 126 SGSGWGRFIGCTQTRLVGSSSAGKTRTSVCCR 157


>11_03_0010 - 8922361-8922375,8923888-8924610
          Length = 245

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -1

Query: 644 ATSAGASRGDHVALPIGAY-ERAGFNPGNVC 555
           A    A   D  A  IGAY   AG+NPG +C
Sbjct: 63  AAGMAADAADSAAANIGAYIPEAGYNPGKLC 93


>05_05_0142 - 22673607-22674134
          Length = 175

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +1

Query: 340 EGRRSLPHSWPLLLQRSARSWSAALLCAS 426
           +GRR  P SW  +  RS R WS   L AS
Sbjct: 39  DGRRCRPVSWIPVSGRSGRRWSTVQLSAS 67


>05_04_0116 + 18131510-18133192
          Length = 560

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = -1

Query: 452 AVAHVHVLRLAQSSAALHERADLWSKSGQLWGRLRRPSQSSLVGSAAASNRHLSTLCRL 276
           AVA    L    S+ A H R     +S  L G LRR +++      A ++  L+++ R+
Sbjct: 125 AVAQNASLAAVASALAAHRRNQATHRSAALHGHLRRCAEALAASRPADADAELASIARM 183


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,471,525
Number of Sequences: 37544
Number of extensions: 298297
Number of successful extensions: 1053
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)