Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G07
         (917 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g44930.1 68416.m04840 cation/hydrogen exchanger, putative (CH...    28   7.5  
At3g44920.1 68416.m04839 cation/hydrogen exchanger, putative (CH...    28   7.5  
At1g44880.1 68414.m05142 Ulp1 protease family protein similar to...    28   7.5  

>At3g44930.1 68416.m04840 cation/hydrogen exchanger, putative
           (CHX10) monovalent cation:proton antiporter family 2
           (CPA2) member, PMID:11500563
          Length = 731

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 11  YRXTIGNSLRFLINHFVFGKFVIKWVID*TP 103
           YR T+   + FL+   VF K +++WVID TP
Sbjct: 187 YRDTVAVIIFFLVVFLVF-KPMVQWVIDRTP 216


>At3g44920.1 68416.m04839 cation/hydrogen exchanger, putative
           (CHX11) monovalent cation:proton antiporter family 2
           (CPA2) member, PMID:11500563
          Length = 671

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 11  YRXTIGNSLRFLINHFVFGKFVIKWVID*TP 103
           YR  +   + FLI  FVF K +++W+ID TP
Sbjct: 127 YRDLVAVIIFFLIVFFVF-KPMVQWIIDRTP 156


>At1g44880.1 68414.m05142 Ulp1 protease family protein similar to
           At5g28170, At1g35110, At3g42530, At4g19320, At5g36020,
           At4g03970, At3g43010, At2g10350; contains Pfam profile
           PF02902: Ulp1 protease family, C-terminal catalytic
           domain
          Length = 1038

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 634 PARAEGTTSLSRSEHMNVRDSTRATSAGSVRANQQLSY 521
           PAR  G  +LS +EHM V  S  +    +   NQ+ ++
Sbjct: 846 PARERGKPTLSEAEHMEVLVSLLSQKLATTLTNQRAAF 883


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,751,621
Number of Sequences: 28952
Number of extensions: 206524
Number of successful extensions: 589
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2178500352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)