Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G06
         (910 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.5  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   7.3  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   9.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 719 NGRRIPFDEPSTSRPCRSGCEHRTSARLSCVGG 621
           +G  +  DEPSTS     G E R     +  GG
Sbjct: 94  SGHYLARDEPSTSLAVAGGSERRVQRDATSSGG 126


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 416 PRVGRHTNIGRPASPPP 366
           PR  RHT  G  AS PP
Sbjct: 836 PRGSRHTRQGSEASSPP 852


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = -2

Query: 528  ISKSPKEEK*SRTASSVVFHGKPRTIRSEHRGRGGGDSARGKAH 397
            +S SPK     R A    + G P        G GGG  A G+++
Sbjct: 1468 MSASPKMYSFRRIAQQGGYGGSPTKGAGGGGGGGGGKGAAGRSN 1511


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 860,144
Number of Sequences: 2352
Number of extensions: 18153
Number of successful extensions: 103
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)