Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_G06
(910 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 93 3e-19
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 75 9e-14
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 75 9e-14
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 62 7e-10
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 62 7e-10
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 62 7e-10
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 56 5e-08
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 56 5e-08
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 53 2e-07
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 53 2e-07
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 49 5e-06
Z49910-6|CAH04715.1| 124|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 48 7e-06
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 48 7e-06
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 48 7e-06
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 48 7e-06
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 48 7e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 48 1e-05
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 48 1e-05
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 47 2e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 47 2e-05
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 46 4e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 45 9e-05
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 44 1e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 44 1e-04
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 42 8e-04
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 39 0.004
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 39 0.006
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 39 0.006
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 38 0.013
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 38 0.013
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 37 0.017
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 37 0.023
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 37 0.023
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 37 0.023
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 37 0.023
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 36 0.040
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 36 0.040
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 36 0.053
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 36 0.053
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 36 0.053
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 35 0.070
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 35 0.070
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 35 0.070
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 35 0.070
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 35 0.070
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 35 0.092
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 35 0.092
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 35 0.092
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 35 0.092
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 34 0.12
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 34 0.12
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 34 0.12
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.21
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 33 0.21
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.37
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.37
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 33 0.37
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 33 0.37
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 33 0.37
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 33 0.37
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 33 0.37
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 33 0.37
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 32 0.65
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 32 0.65
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 32 0.65
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 32 0.65
U14635-5|AAN63442.1| 464|Caenorhabditis elegans Hypothetical pr... 30 2.0
U14635-4|AAL02446.1| 459|Caenorhabditis elegans Hypothetical pr... 30 2.0
U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical pr... 30 2.0
U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical pr... 30 2.0
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 30 2.0
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 30 2.6
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 29 6.1
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 29 6.1
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 28 8.0
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 92.7 bits (220), Expect = 3e-19
Identities = 45/108 (41%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Frame = +2
Query: 446 DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG- 622
DLIVLG+ +KTT+E + YF G ++ ++KR + G SKGFGF++ + Q + L
Sbjct: 174 DLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKS-DGNSKGFGFVRMSSVGEQNKVLAI 232
Query: 623 RRHMIDGRWCDVRIPNGKDGSS-TAHRKVFVGRCTENITAEDLREYFG 763
+HMIDGR CDV++P+G+D + ++FVGR T+ + LR+ FG
Sbjct: 233 PQHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFG 280
Score = 48.4 bits (110), Expect = 7e-06
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +2
Query: 188 EYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQFAGASGLKYXXXXXXXXXXXXDE----R 355
E++ V + DEPIELPT DG +L++T+ A F GA+GLKY + +
Sbjct: 46 EFITVQDPNGDEPIELPT-VDGVVLMTTLQASFPGATGLKYKNPKTGANRAVQVDPSGLK 104
Query: 356 LSPPAEGW 379
L PA+GW
Sbjct: 105 LIAPADGW 112
Score = 35.1 bits (77), Expect = 0.070
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 777 VTDVFVPRPFRAFSFVT 827
VTDVF+P+PFR F+FVT
Sbjct: 292 VTDVFIPKPFRGFAFVT 308
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 74.5 bits (175), Expect = 9e-14
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GR 625
+ + GL W+TT E +RDYF FG++ V RD T ++GFGFI F + + + L R
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 626 RHMIDGRWCDVRIPNGKDGSS---TAHRKVFVGRCTENITAEDLREYF 760
H +DG+ D ++ K + T +KVF+G + T ED+++YF
Sbjct: 107 EHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYF 154
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +2
Query: 401 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGF 580
AFP+ + + + GL +T E ++ YF ++G + + D T +GFGF
Sbjct: 120 AFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGF 179
Query: 581 IKFAEYEAQLRALG-RRHMIDGRWCDVRIPNGKD 679
+ F E + H I+G+ + + K+
Sbjct: 180 VTFDSDEVADKVCEIHFHEINGKMVECKKAQPKE 213
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 668 NGKDGSSTAHRKVFVGRCTENITAEDLREYFGSXWSSDRCV 790
+G GS K+F+G + TAE+LR+YFG + C+
Sbjct: 36 DGSHGSQDPG-KMFIGGLSWQTTAENLRDYFGRFGEVNECM 75
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 74.5 bits (175), Expect = 9e-14
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GR 625
+ + GL W+TT E +RDYF FG++ V RD T ++GFGFI F + + + L R
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 626 RHMIDGRWCDVRIPNGKDGSS---TAHRKVFVGRCTENITAEDLREYF 760
H +DG+ D ++ K + T +KVF+G + T ED+++YF
Sbjct: 107 EHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYF 154
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +2
Query: 401 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGF 580
AFP+ + + + GL +T E ++ YF ++G + + D T +GFGF
Sbjct: 120 AFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGF 179
Query: 581 IKFAEYEAQLRALG-RRHMIDGRWCDVRIPNGKD 679
+ F E + H I+G+ + + K+
Sbjct: 180 VTFDSDEVADKVCEIHFHEINGKMVECKKAQPKE 213
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 668 NGKDGSSTAHRKVFVGRCTENITAEDLREYFGSXWSSDRCV 790
+G GS K+F+G + TAE+LR+YFG + C+
Sbjct: 36 DGSHGSQDPG-KMFIGGLSWQTTAENLRDYFGRFGEVNECM 75
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 61.7 bits (143), Expect = 7e-10
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA-EYEAQLRALGR 625
+ V GL TT++ +R+++S FG++ + V RD T S+GFGF+ F+ + E R
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 626 RHMIDGRWCDVR--IP---NGKDGSSTAHRKVFVGRCTENITAEDLREYF 760
H+IDG+ D + +P + S+ + ++++V E+ T + L EYF
Sbjct: 85 PHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYF 134
Score = 51.2 bits (117), Expect = 1e-06
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA-QLRALGR 625
L V G+ TE+ + +YF+ +G + ++ D T +GFGF+ F ++++ L +
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Query: 626 RHMIDGRWCDVRIPNGKDGSSTA 694
HM++G CDVR KD S A
Sbjct: 176 SHMVNGHRCDVRKGLSKDEMSKA 198
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 61.7 bits (143), Expect = 7e-10
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA-EYEAQLRALGR 625
+ V GL TT++ +R+++S FG++ + V RD T S+GFGF+ F+ + E R
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 626 RHMIDGRWCDVR--IP---NGKDGSSTAHRKVFVGRCTENITAEDLREYF 760
H+IDG+ D + +P + S+ + ++++V E+ T + L EYF
Sbjct: 85 PHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYF 134
Score = 51.2 bits (117), Expect = 1e-06
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA-QLRALGR 625
L V G+ TE+ + +YF+ +G + ++ D T +GFGF+ F ++++ L +
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Query: 626 RHMIDGRWCDVRIPNGKDGSSTA 694
HM++G CDVR KD S A
Sbjct: 176 SHMVNGHRCDVRKGLSKDEMSKA 198
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 61.7 bits (143), Expect = 7e-10
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA-EYEAQLRALGR 625
+ V GL TT++ +R+++S FG++ + V RD T S+GFGF+ F+ + E R
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 626 RHMIDGRWCDVR--IP---NGKDGSSTAHRKVFVGRCTENITAEDLREYF 760
H+IDG+ D + +P + S+ + ++++V E+ T + L EYF
Sbjct: 85 PHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYF 134
Score = 51.2 bits (117), Expect = 1e-06
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA-QLRALGR 625
L V G+ TE+ + +YF+ +G + ++ D T +GFGF+ F ++++ L +
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Query: 626 RHMIDGRWCDVRIPNGKDGSSTA 694
HM++G CDVR KD S A
Sbjct: 176 SHMVNGHRCDVRKGLSKDEMSKA 198
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 55.6 bits (128), Expect = 5e-08
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYE-AQLRALGR 625
+ V G+ + E + +F+ +G++ QVK D G S+GF F++F E +L R
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 626 RHMIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYF 760
I G+ +V K S ++KVFVG + + +DLR +F
Sbjct: 91 EQTIKGKSVEV-----KPAKSRENKKVFVGGLPSDYSEQDLRSHF 130
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRR 628
+ V GLP +E+ +R +F FG + ++ D +T + F FI F E E+ +A +
Sbjct: 112 VFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQT 171
Query: 629 HMIDG-RWCDVR--IPNGK 676
G R CDV+ +P GK
Sbjct: 172 KQTFGTRECDVKKAVPQGK 190
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 55.6 bits (128), Expect = 5e-08
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYE-AQLRALGR 625
+ V G+ + E + +F+ +G++ QVK D G S+GF F++F E +L R
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 626 RHMIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYF 760
I G+ +V K S ++KVFVG + + +DLR +F
Sbjct: 91 EQTIKGKSVEV-----KPAKSRENKKVFVGGLPSDYSEQDLRSHF 130
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRR 628
+ V GLP +E+ +R +F FG + ++ D +T + F FI F E E+ +A +
Sbjct: 112 VFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQT 171
Query: 629 HMIDG-RWCDVR--IPNGK 676
G R CDV+ +P GK
Sbjct: 172 KQTFGTRECDVKKAVPQGK 190
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Frame = +2
Query: 491 VRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA-EYEAQLRALGRRHMIDGRWCDVR-- 661
+R+++S FG++ + V RD T S+GFGF+ F+ + E R H+IDG+ D +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 662 IP---NGKDGSSTAHRKVFVGRCTENITAEDLREYF 760
+P + S+ + ++++V E+ T + L EYF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYF 96
Score = 51.2 bits (117), Expect = 1e-06
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA-QLRALGR 625
L V G+ TE+ + +YF+ +G + ++ D T +GFGF+ F ++++ L +
Sbjct: 78 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 137
Query: 626 RHMIDGRWCDVRIPNGKDGSSTA 694
HM++G CDVR KD S A
Sbjct: 138 SHMVNGHRCDVRKGLSKDEMSKA 160
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Frame = +2
Query: 491 VRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA-EYEAQLRALGRRHMIDGRWCDVR-- 661
+R+++S FG++ + V RD T S+GFGF+ F+ + E R H+IDG+ D +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 662 IP---NGKDGSSTAHRKVFVGRCTENITAEDLREYF 760
+P + S+ + ++++V E+ T + L EYF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYF 96
Score = 51.2 bits (117), Expect = 1e-06
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA-QLRALGR 625
L V G+ TE+ + +YF+ +G + ++ D T +GFGF+ F ++++ L +
Sbjct: 78 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 137
Query: 626 RHMIDGRWCDVRIPNGKDGSSTA 694
HM++G CDVR KD S A
Sbjct: 138 SHMVNGHRCDVRKGLSKDEMSKA 160
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +2
Query: 434 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAE-YEAQL 610
P+ L + GL TT+E + +YFS +G ++ V RD T S+GFGF+ FA + A+
Sbjct: 46 PQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAES 105
Query: 611 RALGRRHMIDGRWCD 655
R H + G+ D
Sbjct: 106 AMNDRPHKLGGKTVD 120
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +2
Query: 434 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAE-YEAQL 610
P+ L + GL TT+E + +YFS +G ++ V RD T S+GFGF+ FA + A+
Sbjct: 66 PQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAES 125
Query: 611 RALGRRHMIDGRWCD 655
R H + G+ D
Sbjct: 126 AMNDRPHKLGGKTVD 140
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +2
Query: 434 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAE-YEAQL 610
P+ L + GL TT+E + +YFS +G ++ V RD T S+GFGF+ FA + A+
Sbjct: 67 PQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAES 126
Query: 611 RALGRRHMIDGRWCD 655
R H + G+ D
Sbjct: 127 AMNDRPHKLGGKTVD 141
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/87 (31%), Positives = 47/87 (54%)
Frame = +2
Query: 359 SPPAEGWPAYRYWCAFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQV 538
SP + + + +C+ P + + ++LI+ LP T+E VR F+S G++ ++
Sbjct: 17 SPVQTTYTSTQRYCSAPNVDIGESK---TNLIINYLPQGMTQEEVRSLFTSIGEIESCKL 73
Query: 539 KRDTRTGLSKGFGFIKFAEYEAQLRAL 619
RD TG S G+GF+ + E LRA+
Sbjct: 74 VRDKVTGQSLGYGFVNYVREEDALRAV 100
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 443 SDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 589
S+L V G+P T + F FG ++ ++ D TGLSKG GF++F
Sbjct: 128 SNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRF 176
Score = 31.5 bits (68), Expect = 0.86
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +2
Query: 413 AESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA 592
A PP L V L T + + FS FG ++ V++ RD T KG+ F+ +
Sbjct: 364 ATLPPSDTAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDL-TQQCKGYAFVSMS 422
Query: 593 EYEAQLRAL 619
Y A+
Sbjct: 423 NYTEAYNAM 431
>Z49910-6|CAH04715.1| 124|Caenorhabditis elegans Hypothetical
protein F44G4.4b protein.
Length = 124
Score = 48.4 bits (110), Expect = 7e-06
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +2
Query: 188 EYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQFAGASGLKYXXXXXXXXXXXXDE----R 355
E++ V + DEPIELPT DG +L++T+ A F GA+GLKY + +
Sbjct: 46 EFITVQDPNGDEPIELPT-VDGVVLMTTLQASFPGATGLKYKNPKTGANRAVQVDPSGLK 104
Query: 356 LSPPAEGW 379
L PA+GW
Sbjct: 105 LIAPADGW 112
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 48.4 bits (110), Expect = 7e-06
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 7/171 (4%)
Frame = +2
Query: 419 SPPPRPRCSDLIVL---GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 589
SP P +D I + +P + E R F +G + + RD T SKG F+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 590 AEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYF 760
+ + A G H +I+G V++ D + RK+F+G+ ++ E+LRE F
Sbjct: 104 YHRKDAIEAQGALHNIKVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 761 GSXWSSDRC-VCAATLSCIQLCDVLDXNSRSCVTDQFKGLYFTFXAXCCLA 910
+ C V + C + +RSC K ++ + C A
Sbjct: 163 AKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSA 213
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 434 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLR 613
P ++L + LP + + + F+ FG +L +V D T LSK FGF+ + ++
Sbjct: 496 PDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATN 555
Query: 614 AL 619
A+
Sbjct: 556 AI 557
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 48.4 bits (110), Expect = 7e-06
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 7/171 (4%)
Frame = +2
Query: 419 SPPPRPRCSDLIVL---GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 589
SP P +D I + +P + E R F +G + + RD T SKG F+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 590 AEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYF 760
+ + A G H +I+G V++ D + RK+F+G+ ++ E+LRE F
Sbjct: 104 YHRKDAIEAQGALHNIKVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 761 GSXWSSDRC-VCAATLSCIQLCDVLDXNSRSCVTDQFKGLYFTFXAXCCLA 910
+ C V + C + +RSC K ++ + C A
Sbjct: 163 AKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSA 213
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 434 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLR 613
P ++L + LP + + + F+ FG +L +V D T LSK FGF+ + ++
Sbjct: 496 PDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATN 555
Query: 614 AL 619
A+
Sbjct: 556 AI 557
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 48.4 bits (110), Expect = 7e-06
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 7/171 (4%)
Frame = +2
Query: 419 SPPPRPRCSDLIVL---GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 589
SP P +D I + +P + E R F +G + + RD T SKG F+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 590 AEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYF 760
+ + A G H +I+G V++ D + RK+F+G+ ++ E+LRE F
Sbjct: 104 YHRKDAIEAQGALHNIKVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 761 GSXWSSDRC-VCAATLSCIQLCDVLDXNSRSCVTDQFKGLYFTFXAXCCLA 910
+ C V + C + +RSC K ++ + C A
Sbjct: 163 AKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSA 213
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 434 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLR 613
P ++L + LP + + + F+ FG +L +V D T LSK FGF+ + ++
Sbjct: 425 PDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATN 484
Query: 614 AL 619
A+
Sbjct: 485 AI 486
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 48.4 bits (110), Expect = 7e-06
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 7/171 (4%)
Frame = +2
Query: 419 SPPPRPRCSDLIVL---GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 589
SP P +D I + +P + E R F +G + + RD T SKG F+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 590 AEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYF 760
+ + A G H +I+G V++ D + RK+F+G+ ++ E+LRE F
Sbjct: 104 YHRKDAIEAQGALHNIKVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 761 GSXWSSDRC-VCAATLSCIQLCDVLDXNSRSCVTDQFKGLYFTFXAXCCLA 910
+ C V + C + +RSC K ++ + C A
Sbjct: 163 AKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSA 213
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 48.4 bits (110), Expect = 7e-06
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 7/171 (4%)
Frame = +2
Query: 419 SPPPRPRCSDLIVL---GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 589
SP P +D I + +P + E R F +G + + RD T SKG F+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 590 AEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYF 760
+ + A G H +I+G V++ D + RK+F+G+ ++ E+LRE F
Sbjct: 104 YHRKDAIEAQGALHNIKVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 761 GSXWSSDRC-VCAATLSCIQLCDVLDXNSRSCVTDQFKGLYFTFXAXCCLA 910
+ C V + C + +RSC K ++ + C A
Sbjct: 163 AKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSA 213
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 434 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLR 613
P ++L + LP + + + F+ FG +L +V D T LSK FGF+ + ++
Sbjct: 496 PDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATN 555
Query: 614 AL 619
A+
Sbjct: 556 AI 557
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 467 PWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 619
P++TTEE + ++FSS G + V++ D TG +GF FI+FAE + RA+
Sbjct: 13 PFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 47.6 bits (108), Expect = 1e-05
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 7/161 (4%)
Frame = +2
Query: 419 SPPPRPRCSDLIVL---GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 589
SP P +D I + +P + E R F +G + + RD T SKG F+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 590 AEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYF 760
+ + A G H +I+G V++ D + RK+F+G+ ++ E+LRE F
Sbjct: 104 YHRKDAIEAQGALHNIKVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 761 GSXWSSDRC-VCAATLSCIQLCDVLDXNSRSCVTDQFKGLY 880
+ C V + C + +RSC K ++
Sbjct: 163 AKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 47.2 bits (107), Expect = 2e-05
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Frame = +2
Query: 419 SPPPRPRCSDLIVL---GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 589
SP P +D I + +P + E R F +G + + RD T SKG F+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 590 AEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYF 760
+ + A G H +I+G V++ D + RK+F+G+ ++ E+LRE F
Sbjct: 104 YHRKDAIEAQGALHNIKVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 761 GSXWSSDRC 787
+ C
Sbjct: 163 AKFGHIEDC 171
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/58 (36%), Positives = 37/58 (63%)
Frame = +2
Query: 467 PWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMID 640
P++TTE+ + +YFS G++ V++ D TG +GF F++F E A RA+ + + +D
Sbjct: 12 PFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNGVD 69
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GR 625
+ V GLP+ T+++ + +YF FGD+ V D T S+G+GF+ + + RA
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDP 96
Query: 626 RHMIDGRWCDVRI 664
+IDGR +V +
Sbjct: 97 NPIIDGRKANVNL 109
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +2
Query: 443 SDLIVLGLPWKTTEEAVRDYFSSFGDLLMV-QVKRDTRTGLSKGFGFIKFAEYEAQLRAL 619
+++ V L + E+ + D FS+FG +L V ++ RD +G SKGF FI FA +EA AL
Sbjct: 100 ANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTAL 159
Score = 32.3 bits (70), Expect = 0.49
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +2
Query: 431 RPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQL 610
R + + + V GL K +E + + G ++ V + +D T +GFGF++F E
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Query: 611 RALGRRHMID--GRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGS 766
A+ +MI G+ V + + + +FVG + + L + F +
Sbjct: 69 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSA 122
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +2
Query: 443 SDLIVLGLPWKTTEEAVRDYFSSFGDLLMV-QVKRDTRTGLSKGFGFIKFAEYEAQLRAL 619
+++ V L + E+ + D FS+FG +L V ++ RD +G SKGF FI FA +EA AL
Sbjct: 110 ANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTAL 169
Score = 32.3 bits (70), Expect = 0.49
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +2
Query: 431 RPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQL 610
R + + + V GL K +E + + G ++ V + +D T +GFGF++F E
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Query: 611 RALGRRHMID--GRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGS 766
A+ +MI G+ V + + + +FVG + + L + F +
Sbjct: 79 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSA 132
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.8 bits (101), Expect = 9e-05
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 455 VLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 619
V LP + E+ +RD F G ++ + + RD TGL KGF F+ F + RA+
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAI 234
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +2
Query: 443 SDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG 622
+ L + L ++TT +R F +GD+ V + RD + SKGFGF++F E AL
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 623 RR--HMIDGR 646
R ++DGR
Sbjct: 79 RTDGKLVDGR 88
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +2
Query: 443 SDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG 622
+ L + L ++TT +R F +GD+ V + RD + SKGFGF++F E AL
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 623 RR--HMIDGR 646
R ++DGR
Sbjct: 79 RTDGKLVDGR 88
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/52 (34%), Positives = 33/52 (63%)
Frame = +2
Query: 464 LPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 619
+P++ TEE + +YF++ G + V++ D TG +GF F++F+E RA+
Sbjct: 13 VPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAV 64
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 43.2 bits (97), Expect = 3e-04
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 395 WCAFP-RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKG 571
W P + +S R + V L + + +R+ F FGD+ +V RDT T SKG
Sbjct: 5 WAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKG 64
Query: 572 FGFIKFAEYEAQLRALGRRHMIDGRW 649
+GF+ + + E RA+ ++G+W
Sbjct: 65 YGFVSYPKREEAERAI---EQMNGQW 87
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +2
Query: 479 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDV 658
TE+ +R F+SFG + V++ + +G+ F+KF +A +A+ + + D V
Sbjct: 139 TEDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 192
Query: 659 RIPNGKDGSS 688
R GK G +
Sbjct: 193 RCSWGKTGDT 202
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 43.2 bits (97), Expect = 3e-04
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 395 WCAFP-RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKG 571
W P + +S R + V L + + +R+ F FGD+ +V RDT T SKG
Sbjct: 15 WAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKG 74
Query: 572 FGFIKFAEYEAQLRALGRRHMIDGRW 649
+GF+ + + E RA+ ++G+W
Sbjct: 75 YGFVSYPKREEAERAI---EQMNGQW 97
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +2
Query: 479 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDV 658
TE+ +R F+SFG + V++ + +G+ F+KF +A +A+ + + D V
Sbjct: 149 TEDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 202
Query: 659 RIPNGKDGSS 688
R GK G +
Sbjct: 203 RCSWGKTGDT 212
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 43.2 bits (97), Expect = 3e-04
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 395 WCAFP-RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKG 571
W P + +S R + V L + + +R+ F FGD+ +V RDT T SKG
Sbjct: 118 WAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKG 177
Query: 572 FGFIKFAEYEAQLRALGRRHMIDGRW 649
+GF+ + + E RA+ ++G+W
Sbjct: 178 YGFVSYPKREEAERAI---EQMNGQW 200
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEY---EAQLRAL 619
L V L TE+ + F+ G + +V D G + + F++F+++ L+ +
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQALQTM 104
Query: 620 GRRHMIDGRW-CDVRIPNGKDGS---STAHRKVFVGRCTENITAEDLREYF 760
+R ++D + + G+ S +T H VFVG + + + LRE F
Sbjct: 105 NKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAF 155
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +2
Query: 479 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDV 658
TE+ +R F+SFG + V++ + +G+ F+KF +A +A+ + + D V
Sbjct: 252 TEDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 305
Query: 659 RIPNGKDGSS 688
R GK G +
Sbjct: 306 RCSWGKTGDT 315
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 43.2 bits (97), Expect = 3e-04
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 395 WCAFP-RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKG 571
W P + +S R + V L + + +R+ F FGD+ +V RDT T SKG
Sbjct: 86 WAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKG 145
Query: 572 FGFIKFAEYEAQLRALGRRHMIDGRW 649
+GF+ + + E RA+ ++G+W
Sbjct: 146 YGFVSYPKREEAERAI---EQMNGQW 168
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +2
Query: 479 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDV 658
TE+ +R F+SFG + V++ + +G+ F+KF +A +A+ + + D V
Sbjct: 220 TEDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 273
Query: 659 RIPNGKDGSS 688
R GK G +
Sbjct: 274 RCSWGKTGDT 283
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 470 WKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGR 646
W T + + YF +G + V + D TGL +GF I F + +A+ +R H+IDG
Sbjct: 34 WVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGD 93
Query: 647 WCDV 658
DV
Sbjct: 94 RVDV 97
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRA 616
L + LP+ T E+ ++ F +G++ VQV D +TG KGF ++F EA + A
Sbjct: 281 LFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAA 336
Score = 36.3 bits (80), Expect = 0.030
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGR 625
LIV LP TE+ +R +F +G + +K T+ G +GF F+ F + + AL +
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASLKY-TKEGKFRGFAFVGFLDEGSASNALAK 62
Score = 35.5 bits (78), Expect = 0.053
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 440 CSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQV-KRDTRTGLSKGFGFIKFAEYEAQLRA 616
C+ L+V LP++ + + V F +FG + +++ K+ + +GFGF+ F + RA
Sbjct: 747 CTKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRA 806
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 41.1 bits (92), Expect = 0.001
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYE 601
+ V + + +E+ +R FS G++L +++ D TG KG+GFI+F + +
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = +2
Query: 416 ESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 589
E+P P +C L V L TTE+ +RD F FG++ + D +G S+GFGFI F
Sbjct: 70 ENPQPS-KC--LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSS-FGDLLMVQVKRDTRTGLSKGFGFIKFAE 595
+ V LP++ TE+A+ +FS+ G + V++ RD TG KGF F+ F +
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQ 297
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 446 DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 619
+L V + ++ +RD+FSSFG + +V D G SKGFGF+ F + E A+
Sbjct: 344 NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAV 400
Score = 36.7 bits (81), Expect = 0.023
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +2
Query: 482 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH--MIDGRWCD 655
+E + FS FG++ V D + G KGFGF+ FA+ +A +A+ + + +++G C
Sbjct: 251 QEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCK 309
Query: 656 VRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFG 763
+ + + S R + R E + E ++ Y G
Sbjct: 310 LSVCRAQKKS---ERSAELKRKYEALKQERVQRYQG 342
Score = 34.7 bits (76), Expect = 0.092
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 485 EAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF-AEYEAQ 607
++V D FS FG++L +V D G SKG+GF+ F E+ AQ
Sbjct: 159 KSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQ 199
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 446 DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 619
+L V + ++ +RD+FSSFG + +V D G SKGFGF+ F + E A+
Sbjct: 344 NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAV 400
Score = 36.7 bits (81), Expect = 0.023
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +2
Query: 482 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH--MIDGRWCD 655
+E + FS FG++ V D + G KGFGF+ FA+ +A +A+ + + +++G C
Sbjct: 251 QEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCK 309
Query: 656 VRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFG 763
+ + + S R + R E + E ++ Y G
Sbjct: 310 LSVCRAQKKS---ERSAELKRKYEALKQERVQRYQG 342
Score = 34.7 bits (76), Expect = 0.092
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 485 EAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF-AEYEAQ 607
++V D FS FG++L +V D G SKG+GF+ F E+ AQ
Sbjct: 159 KSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQ 199
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 428 PRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 589
P R L V G TE+ + F FGD++ + + D +G +GFGF++F
Sbjct: 6 PHNRKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEF 59
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 470 WKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 619
WK+T + ++F+ G + V + +D TG K F F++F + E+ AL
Sbjct: 55 WKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLAL 104
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 37.5 bits (83), Expect = 0.013
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRA 616
+ V + + TE+ V D FS +G + + + D RTG KG+ + EYE Q A
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALV---EYETQKEA 109
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 37.5 bits (83), Expect = 0.013
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +2
Query: 461 GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 619
GL + +E V FS +G+++ + + RD TG SKGF F+ + + + + A+
Sbjct: 44 GLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAV 96
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 479 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDV 658
+ E ++ F+ FG++ +V RD +T SKG+GF+ F + A+ ++G+W
Sbjct: 147 SNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAG---MNGKWIGK 203
Query: 659 R 661
R
Sbjct: 204 R 204
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/49 (26%), Positives = 29/49 (59%)
Frame = +2
Query: 473 KTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 619
+TT+ +RD FS++GD+ V++ + R + F+++ + E +A+
Sbjct: 247 QTTDADLRDLFSTYGDIAEVRIFKTQR------YAFVRYEKKECATKAI 289
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 37.1 bits (82), Expect = 0.017
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 434 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLR 613
P ++L + GL T ++ +R+ S +G++ + D T KG+GF+ F +A
Sbjct: 104 PSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAA 163
Query: 614 AL 619
A+
Sbjct: 164 AV 165
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 464 LPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 589
+P+ E+ + YF FG++L ++V R+ RTG KG+ ++ F
Sbjct: 39 IPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGF 80
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 36.7 bits (81), Expect = 0.023
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +2
Query: 431 RPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQL 610
R ++ + L +++ D FS FG++L +V D G SKG+GF+ F EA
Sbjct: 116 RSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQ 174
Query: 611 RAL 619
A+
Sbjct: 175 NAI 177
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 446 DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 619
+L V L ++ ++ F S+G++ +V D G SKGFGF+ F + E A+
Sbjct: 318 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAV 374
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 482 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH 631
+E + F+ FG++ +V T G SKGFGF+ FA E A+ H
Sbjct: 226 KETLEKVFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALH 273
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 36.7 bits (81), Expect = 0.023
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +2
Query: 431 RPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQL 610
R ++ + L +++ D FS FG++L +V D G SKG+GF+ F EA
Sbjct: 53 RSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQ 111
Query: 611 RAL 619
A+
Sbjct: 112 NAI 114
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 446 DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 619
+L V L ++ ++ F S+G++ +V D G SKGFGF+ F + E A+
Sbjct: 255 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAV 311
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 482 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH 631
+E + F+ FG++ +V T G SKGFGF+ FA E A+ H
Sbjct: 163 KETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALH 210
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 36.7 bits (81), Expect = 0.023
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +2
Query: 431 RPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQL 610
R ++ + L +++ D FS FG++L +V D G SKG+GF+ F EA
Sbjct: 116 RSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQ 174
Query: 611 RAL 619
A+
Sbjct: 175 NAI 177
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 446 DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 619
+L V L ++ ++ F S+G++ +V D G SKGFGF+ F + E A+
Sbjct: 318 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAV 374
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 482 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH 631
+E + F+ FG++ +V T G SKGFGF+ FA E A+ H
Sbjct: 226 KETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALH 273
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 36.7 bits (81), Expect = 0.023
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +2
Query: 473 KTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRW 649
+ ++E + F + +V R++RT SKG+GF+ F + E +RA+ R M DG++
Sbjct: 213 EVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAM--REM-DGKY 268
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 35.9 bits (79), Expect = 0.040
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 687 DEPSLPFGMRTSHQRPSIMCRRPNARS*ASYSANLMKPKPLDSP 556
+EP G++TS Q PS +RP+ A S+N++ P P +P
Sbjct: 1465 NEPDQTTGLKTSQQPPSFAAKRPSFGRQAQSSSNVIPPAPAPTP 1508
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 35.9 bits (79), Expect = 0.040
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 687 DEPSLPFGMRTSHQRPSIMCRRPNARS*ASYSANLMKPKPLDSP 556
+EP G++TS Q PS +RP+ A S+N++ P P +P
Sbjct: 1465 NEPDQTTGLKTSQQPPSFAAKRPSFGRQAQSSSNVIPPAPAPTP 1508
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 35.5 bits (78), Expect = 0.053
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +2
Query: 422 PPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYE 601
P P L V +P E+ +R F FG + + +D TG+ KG F+ + +
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 602 AQLRALGRRH 631
+ +R H
Sbjct: 82 SAVRCQATLH 91
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 35.5 bits (78), Expect = 0.053
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +2
Query: 422 PPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYE 601
P P L V +P E+ +R F FG + + +D TG+ KG F+ + +
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 602 AQLRALGRRH 631
+ +R H
Sbjct: 82 SAVRCQATLH 91
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 35.5 bits (78), Expect = 0.053
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +2
Query: 419 SPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEY 598
S P R + V L + +R+ F FG++ ++ RD T KG+GF+ +
Sbjct: 124 SKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRR 183
Query: 599 EAQLRALGRRHMIDGRW 649
E RA+ ++G W
Sbjct: 184 EDAERAIDE---MNGAW 197
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 35.1 bits (77), Expect = 0.070
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 443 SDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 619
++L + GL T ++ +R+ S +G++ + D T KG+GF+ F +A A+
Sbjct: 81 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAV 139
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 35.1 bits (77), Expect = 0.070
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 461 GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHM 634
GLP T E + FS FG +L+V + D G KG + F A RAL ++ +
Sbjct: 325 GLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKKFL 382
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 35.1 bits (77), Expect = 0.070
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 461 GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHM 634
GLP T E + FS FG +L+V + D G KG + F A RAL ++ +
Sbjct: 325 GLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKKFL 382
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 35.1 bits (77), Expect = 0.070
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 461 GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHM 634
GLP T E + FS FG +L+V + D G KG + F A RAL ++ +
Sbjct: 111 GLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKKFL 168
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 35.1 bits (77), Expect = 0.070
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 461 GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHM 634
GLP T E + FS FG +L+V + D G KG + F A RAL ++ +
Sbjct: 325 GLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKKFL 382
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 34.7 bits (76), Expect = 0.092
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 461 GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGR-RHMI 637
GLPW+ TE+ +RD+F + G + +++ R R G + G + F E AL + R +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 638 DGRWCDV 658
R+ +V
Sbjct: 68 GSRYIEV 74
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 34.7 bits (76), Expect = 0.092
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 461 GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGR-RHMI 637
GLPW+ TE+ +RD+F + G + +++ R R G + G + F E AL + R +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 638 DGRWCDV 658
R+ +V
Sbjct: 68 GSRYIEV 74
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 34.7 bits (76), Expect = 0.092
Identities = 15/52 (28%), Positives = 32/52 (61%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA 604
L+++ + T + ++FS+ G + V++ D+RTG SKG +++F + E+
Sbjct: 27 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEES 78
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 34.7 bits (76), Expect = 0.092
Identities = 15/52 (28%), Positives = 32/52 (61%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA 604
L+++ + T + ++FS+ G + V++ D+RTG SKG +++F + E+
Sbjct: 172 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEES 223
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 434 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLR 613
P ++L + LP + + + F+ FG +L +V D T LSK FGF+ + ++
Sbjct: 332 PDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATN 391
Query: 614 AL 619
A+
Sbjct: 392 AI 393
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 589
+ V G P TTE +R++F F + V++ + + G SKG+GFI F
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVK-SLDGQSKGYGFITF 113
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 589
+ V G P TTE +R++F F + V++ + + G SKG+GFI F
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVK-SLDGQSKGYGFITF 114
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.21
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +2
Query: 407 PRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIK 586
P +S +P S + V + K ++E +R + G++ + + + G +GFGF
Sbjct: 35 PAQQSSQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSN-GKLQGFGFCH 93
Query: 587 FAEYEAQLRALGRRH 631
F + E LRAL H
Sbjct: 94 FTDLEGTLRALRILH 108
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.21
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +2
Query: 407 PRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIK 586
P +S +P S + V + K ++E +R + G++ + + + G +GFGF
Sbjct: 35 PAQQSSQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSN-GKLQGFGFCH 93
Query: 587 FAEYEAQLRALGRRH 631
F + E LRAL H
Sbjct: 94 FTDLEGTLRALRILH 108
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 446 DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 619
+L V L ++ ++ F S+G++ +V D G SKGFGF+ F + E A+
Sbjct: 258 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAV 314
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 482 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH 631
+E + F+ FG++ +V T G SKGFGF+ FA E A+ H
Sbjct: 166 KETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALH 213
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 32.7 bits (71), Expect = 0.37
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 413 AESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 589
A+ PP + L V L TT+E + FS FG + ++ RD R+G S + FI+F
Sbjct: 234 ADEVPPE---NVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 32.7 bits (71), Expect = 0.37
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 413 AESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 589
A+ PP + L V L TT+E + FS FG + ++ RD R+G S + FI+F
Sbjct: 234 ADEVPPE---NVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 32.7 bits (71), Expect = 0.37
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 413 AESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 589
A+ PP + L V L TT+E + FS FG + ++ RD R+G S + FI+F
Sbjct: 165 ADEVPPE---NVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 220
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.37
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA--QLRALG 622
+ V +P+ E+ + F ++G +L V++ + R SKGFGF+ E+ + RA
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAAL 110
Query: 623 RRHMIDGRWCDVR 661
+ GR +VR
Sbjct: 111 HESHVQGRIIEVR 123
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 479 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMID 640
+E ++ F +FG+++ Q+ R +GFG+++F +Q A+ +M D
Sbjct: 219 SETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFD 272
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 479 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMID 640
+E ++ F +FG+++ Q+ R +GFG+++F +Q A+ +M D
Sbjct: 219 SETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFD 272
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 479 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMID 640
+E ++ F +FG+++ Q+ R +GFG+++F +Q A+ +M D
Sbjct: 219 SETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFD 272
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.37
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA--QLRALG 622
+ V +P+ E+ + F ++G +L V++ + R SKGFGF+ E+ + RA
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAAL 110
Query: 623 RRHMIDGRWCDVR 661
+ GR +VR
Sbjct: 111 HESHVQGRIIEVR 123
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAE 595
+ + GLP TE+ V++ SFG L + D++ G SKG+ F ++ +
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLD 340
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAE 595
+ + GLP TE+ V++ SFG L + D++ G SKG+ F ++ +
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLD 340
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAE 595
+ + GLP TE+ V++ SFG L + D++ G SKG+ F ++ +
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLD 315
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 449 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAE 595
+ + GLP TE+ V++ SFG L + D++ G SKG+ F ++ +
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLD 318
>U14635-5|AAN63442.1| 464|Caenorhabditis elegans Hypothetical
protein C27H5.2d protein.
Length = 464
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 221 EPIELPTEEDGSLLLSTVAAQFAGASGLKY 310
EP+E+ +ED +L +++ F G SG+ Y
Sbjct: 17 EPVEVELDEDAGILWTSLQTAFPGCSGMYY 46
>U14635-4|AAL02446.1| 459|Caenorhabditis elegans Hypothetical
protein C27H5.2b protein.
Length = 459
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 221 EPIELPTEEDGSLLLSTVAAQFAGASGLKY 310
EP+E+ +ED +L +++ F G SG+ Y
Sbjct: 17 EPVEVELDEDAGILWTSLQTAFPGCSGMYY 46
>U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical
protein C27H5.2c protein.
Length = 491
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 221 EPIELPTEEDGSLLLSTVAAQFAGASGLKY 310
EP+E+ +ED +L +++ F G SG+ Y
Sbjct: 17 EPVEVELDEDAGILWTSLQTAFPGCSGMYY 46
>U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical
protein C27H5.2a protein.
Length = 522
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 221 EPIELPTEEDGSLLLSTVAAQFAGASGLKY 310
EP+E+ +ED +L +++ F G SG+ Y
Sbjct: 17 EPVEVELDEDAGILWTSLQTAFPGCSGMYY 46
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -2
Query: 753 SLRSSAVIFSVQRPTNTFR*AVDEPSLPFGMRTSHQRPSIMCRRPN 616
S RSS F + TN R A DE +LP + RPS+ R N
Sbjct: 983 SPRSSTDYFEFGKYTNALRSATDEFALPTRKTSVESRPSVAILRSN 1028
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 407 PRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 517
PR + P R + V G+PW TE A++D F FG
Sbjct: 285 PRDYTSPTFSR--KIFVGGVPWDITEAALKDSFGEFG 319
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 464 LPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA 592
L + T EE +++ S FG + + + + +G SKG F+ F+
Sbjct: 270 LSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFS 312
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 473 KTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGR 625
+ TE+ + D+F +GD+ ++V + KG FI+F EA RA R
Sbjct: 249 QVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTREAAERAAER 293
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = +2
Query: 68 LQNNILLIQELGLNQSLKAVRVDKRDEEVEGQRWSVSKMTEYVPVSEGEQDEPIELPTEE 247
++ IL LN K ++ K D+ G +M E + ++GE++E E+P +E
Sbjct: 980 VEEKILAAARYKLNVDEKVIQAGKFDQRSTGAERK--QMLEQIIQADGEEEEEEEVPDDE 1037
Query: 248 DGSLLLSTVAAQF 286
+ +++ +F
Sbjct: 1038 TVNQMVARSEEEF 1050
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = +2
Query: 68 LQNNILLIQELGLNQSLKAVRVDKRDEEVEGQRWSVSKMTEYVPVSEGEQDEPIELPTEE 247
++ IL LN K ++ K D+ G +M E + ++GE++E E+P +E
Sbjct: 980 VEEKILAAARYKLNVDEKVIQAGKFDQRSTGAERK--QMLEQIIQADGEEEEEEEVPDDE 1037
Query: 248 DGSLLLSTVAAQF 286
+ +++ +F
Sbjct: 1038 TVNQMVARSEEEF 1050
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = +2
Query: 68 LQNNILLIQELGLNQSLKAVRVDKRDEEVEGQRWSVSKMTEYVPVSEGEQDEPIELPTEE 247
++ IL LN K ++ K D+ G +M E + ++GE++E E+P +E
Sbjct: 980 VEEKILAAARYKLNVDEKVIQAGKFDQRSTGAERK--QMLEQIIQADGEEEEEEEVPDDE 1037
Query: 248 DGSLLLSTVAAQF 286
+ +++ +F
Sbjct: 1038 TVNQMVARSEEEF 1050
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 628 THDRRALVRCSHPERQGRLVDGSSKGIRRPLYG 726
T D + + C +P+ R+VD S +R+ +YG
Sbjct: 2233 TTDSKFIFACGYPDYSFRIVDTDSGRVRQAVYG 2265
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 628 THDRRALVRCSHPERQGRLVDGSSKGIRRPLYG 726
T D + + C +P+ R+VD S +R+ +YG
Sbjct: 2233 TTDSKFIFACGYPDYSFRIVDTDSGRVRQAVYG 2265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,902,614
Number of Sequences: 27780
Number of extensions: 395683
Number of successful extensions: 1361
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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