Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_G06
(910 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 24 2.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.9
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 23 2.9
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 23 2.9
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 6.7
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -1
Query: 67 IKPRKKSQKILRN 29
IKPRK Q++LRN
Sbjct: 281 IKPRKHEQRLLRN 293
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.9
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1
Query: 403 GTPISVGRPA 374
GTPIS GRPA
Sbjct: 371 GTPISTGRPA 380
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.9
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1
Query: 403 GTPISVGRPA 374
GTPIS GRPA
Sbjct: 371 GTPISTGRPA 380
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.9
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1
Query: 403 GTPISVGRPA 374
GTPIS GRPA
Sbjct: 371 GTPISTGRPA 380
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.9
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1
Query: 403 GTPISVGRPA 374
GTPIS GRPA
Sbjct: 371 GTPISTGRPA 380
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.9
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1
Query: 403 GTPISVGRPA 374
GTPIS GRPA
Sbjct: 371 GTPISTGRPA 380
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.9
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1
Query: 403 GTPISVGRPA 374
GTPIS GRPA
Sbjct: 371 GTPISTGRPA 380
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.9
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1
Query: 403 GTPISVGRPA 374
GTPIS GRPA
Sbjct: 439 GTPISTGRPA 448
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.9
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1
Query: 403 GTPISVGRPA 374
GTPIS GRPA
Sbjct: 439 GTPISTGRPA 448
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 23.4 bits (48), Expect = 2.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 503 FSSFGDLLMVQVKRDTRTGLSKGFG 577
F+ G+ L K D TGL +GFG
Sbjct: 156 FTGLGNCLTKIFKADGITGLYRGFG 180
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 23.4 bits (48), Expect = 2.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 503 FSSFGDLLMVQVKRDTRTGLSKGFG 577
F+ G+ L K D TGL +GFG
Sbjct: 156 FTGLGNCLTKIFKADGITGLYRGFG 180
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 22.2 bits (45), Expect = 6.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 676 GRLVDGSSKGIRRPLYGEY 732
G +++GSS I YG Y
Sbjct: 365 GNVIEGSSDSINTKFYGMY 383
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,071
Number of Sequences: 438
Number of extensions: 4847
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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