Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_G05
(920 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HR18 Cluster: Mitochondrial ubiquinol-cytochrome c re... 97 7e-19
UniRef50_Q4QPY6 Cluster: IP05690p; n=4; Endopterygota|Rep: IP056... 89 1e-16
UniRef50_A7S8G0 Cluster: Predicted protein; n=1; Nematostella ve... 80 7e-14
UniRef50_UPI0000DB7BD0 Cluster: PREDICTED: similar to CG30354-PA... 74 6e-12
UniRef50_P99028 Cluster: Ubiquinol-cytochrome c reductase comple... 66 1e-09
UniRef50_P07919 Cluster: Ubiquinol-cytochrome c reductase comple... 64 4e-09
UniRef50_Q567R0 Cluster: UQCRH protein; n=10; Euteleostomi|Rep: ... 62 3e-08
UniRef50_O45864 Cluster: Putative uncharacterized protein; n=2; ... 60 1e-07
UniRef50_Q207N8 Cluster: Ubiquinol-cytochrome C reductase comple... 59 2e-07
UniRef50_Q7Z0T5 Cluster: Ubiquinol-cytochrome C reductase comple... 50 1e-04
UniRef50_P48504 Cluster: Ubiquinol-cytochrome c reductase comple... 49 2e-04
UniRef50_Q27345 Cluster: Filarial common antigen protein; n=1; D... 47 8e-04
UniRef50_Q0UPH2 Cluster: Predicted protein; n=5; Pezizomycotina|... 45 0.003
UniRef50_Q53PN7 Cluster: Ubiquinol--cytochrome-c reductase, puta... 44 0.007
UniRef50_Q7S035 Cluster: Predicted protein; n=6; Pezizomycotina|... 44 0.007
UniRef50_Q75AP4 Cluster: ADL124Cp; n=2; Saccharomycetaceae|Rep: ... 42 0.029
UniRef50_Q6BS30 Cluster: Debaryomyces hansenii chromosome D of s... 42 0.029
UniRef50_O42932 Cluster: Ubiquinol-cytochrome-c reductase comple... 40 0.068
UniRef50_Q9XI58 Cluster: F9L1.5 protein; n=2; core eudicotyledon... 40 0.12
UniRef50_Q9D2Q7 Cluster: Adult male tongue cDNA, RIKEN full-leng... 39 0.21
UniRef50_Q4PG23 Cluster: Putative uncharacterized protein; n=1; ... 38 0.27
UniRef50_Q5KF04 Cluster: Putative uncharacterized protein; n=2; ... 38 0.48
UniRef50_A5K0Y0 Cluster: Ubiquinol-cytochrome c reductase hinge ... 36 1.5
UniRef50_A2X5T8 Cluster: Putative uncharacterized protein; n=2; ... 36 1.9
UniRef50_A0DUX9 Cluster: Chromosome undetermined scaffold_65, wh... 34 5.9
>UniRef50_Q1HR18 Cluster: Mitochondrial ubiquinol-cytochrome c
reductase hinge protein; n=3; Endopterygota|Rep:
Mitochondrial ubiquinol-cytochrome c reductase hinge
protein - Aedes aegypti (Yellowfever mosquito)
Length = 86
Score = 96.7 bits (230), Expect = 7e-19
Identities = 42/66 (63%), Positives = 49/66 (74%)
Frame = +2
Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 412
+VDPQ LRE+C++ A +W KYQ CNDRVNSRS T ETC EEL DY+H LD CVTK
Sbjct: 21 VVDPQVVLREKCAEHGTAPQLWEKYQACNDRVNSRSNTTETCVEELFDYLHELDHCVTKT 80
Query: 413 LFKRLK 430
LF +LK
Sbjct: 81 LFSKLK 86
>UniRef50_Q4QPY6 Cluster: IP05690p; n=4; Endopterygota|Rep: IP05690p
- Drosophila melanogaster (Fruit fly)
Length = 86
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/79 (54%), Positives = 52/79 (65%)
Frame = +2
Query: 194 VPVVKXXXXXXXXLVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELI 373
VPV+K LVDPQ +LRE+C K +++ KYQECNDRVN +SKT ETC EEL
Sbjct: 9 VPVLKADDDEKE-LVDPQAALREKCQAKGHIASLYNKYQECNDRVNGKSKTTETCMEELF 67
Query: 374 DYVHVLDKCVTKDLFKRLK 430
D+V LD CV LF +LK
Sbjct: 68 DFVAELDHCVAHSLFSKLK 86
>UniRef50_A7S8G0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 104
Score = 80.2 bits (189), Expect = 7e-14
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = +2
Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 412
LVDP ++RE C +KP+ + + C +RVNS+S T ETC +EL+D++H D CV+K
Sbjct: 39 LVDPMDAIRESCEEKPECSKLKLELSNCEERVNSKSSTTETCAQELLDFMHCRDHCVSKS 98
Query: 413 LFKRLK 430
LF +LK
Sbjct: 99 LFNKLK 104
>UniRef50_UPI0000DB7BD0 Cluster: PREDICTED: similar to CG30354-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG30354-PA - Apis mellifera
Length = 73
Score = 73.7 bits (173), Expect = 6e-12
Identities = 33/61 (54%), Positives = 41/61 (67%)
Frame = +2
Query: 248 QSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKDLFKRL 427
+++ E+CS+ P M K CNDRVNSR +T ETC EELIDYV +D CV K LF +L
Sbjct: 13 KNMTEKCSRLPKCSAMQDKLNTCNDRVNSRKQTEETCMEELIDYVECVDHCVAKTLFTKL 72
Query: 428 K 430
K
Sbjct: 73 K 73
>UniRef50_P99028 Cluster: Ubiquinol-cytochrome c reductase complex
11 kDa protein, mitochondrial precursor; n=17;
Deuterostomia|Rep: Ubiquinol-cytochrome c reductase
complex 11 kDa protein, mitochondrial precursor - Mus
musculus (Mouse)
Length = 89
Score = 66.1 bits (154), Expect = 1e-09
Identities = 30/66 (45%), Positives = 40/66 (60%)
Frame = +2
Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 412
LVDP ++RE C Q + + C++RV+SRS+T E C EEL D++H D CV
Sbjct: 24 LVDPLTTVREHCEQLEKCVKARERLELCDNRVSSRSQTEEDCTEELFDFLHARDHCVAHK 83
Query: 413 LFKRLK 430
LFK LK
Sbjct: 84 LFKNLK 89
>UniRef50_P07919 Cluster: Ubiquinol-cytochrome c reductase complex
11 kDa protein, mitochondrial precursor; n=6;
Tetrapoda|Rep: Ubiquinol-cytochrome c reductase complex
11 kDa protein, mitochondrial precursor - Homo sapiens
(Human)
Length = 91
Score = 64.5 bits (150), Expect = 4e-09
Identities = 29/66 (43%), Positives = 39/66 (59%)
Frame = +2
Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 412
LVDP ++RE+C Q + + C++RV+SRS T E C EEL D++H D CV
Sbjct: 26 LVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSHTEEDCTEELFDFLHARDHCVAHK 85
Query: 413 LFKRLK 430
LF LK
Sbjct: 86 LFNNLK 91
>UniRef50_Q567R0 Cluster: UQCRH protein; n=10; Euteleostomi|Rep:
UQCRH protein - Homo sapiens (Human)
Length = 85
Score = 61.7 bits (143), Expect = 3e-08
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 179 MSDKFVPVVKXXXXXXXXL-VDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAET 355
M D+ +P + DP ++RE+C Q + + C++RV+SRS T E
Sbjct: 1 MGDRILPFLAAVWLCQLAFCTDPLTTVREQCEQLEKCVKARERLELCDERVSSRSHTEED 60
Query: 356 CEEELIDYVHVLDKCVTKDLFKRLK 430
C EEL D++H D CV LF LK
Sbjct: 61 CTEELFDFLHARDHCVAHKLFNNLK 85
>UniRef50_O45864 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 75
Score = 59.7 bits (138), Expect = 1e-07
Identities = 30/65 (46%), Positives = 34/65 (52%)
Frame = +2
Query: 236 VDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKDL 415
VD RE C+ + ECNDRVNSRS T ETC +E+ DYVH LD C
Sbjct: 13 VDQLTQYRERCADH--VTEFKSILDECNDRVNSRSNTEETCHQEMADYVHHLDHCAMPKA 70
Query: 416 FKRLK 430
F LK
Sbjct: 71 FASLK 75
>UniRef50_Q207N8 Cluster: Ubiquinol-cytochrome C reductase
complex-like; n=4; Euteleostomi|Rep:
Ubiquinol-cytochrome C reductase complex-like -
Ictalurus punctatus (Channel catfish)
Length = 89
Score = 58.8 bits (136), Expect = 2e-07
Identities = 27/66 (40%), Positives = 40/66 (60%)
Frame = +2
Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 412
+VDP +++R++C + + K + C RV+SRS T E C EEL D++H D CV+
Sbjct: 25 MVDPLENIRQKCEETEHCVHAREKLEVCETRVSSRS-TEEDCTEELFDFLHARDHCVSHK 83
Query: 413 LFKRLK 430
LF LK
Sbjct: 84 LFHSLK 89
>UniRef50_Q7Z0T5 Cluster: Ubiquinol-cytochrome C reductase complex
protein; n=2; Platyhelminthes|Rep: Ubiquinol-cytochrome
C reductase complex protein - Schistosoma japonicum
(Blood fluke)
Length = 74
Score = 49.6 bits (113), Expect = 1e-04
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +2
Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 412
+VDP +LREE K EC DR +S+T E+CEEELID + +D V K
Sbjct: 12 VVDPLVALREEAKGSSHCSPFLKKLGECGDR---QSRTKESCEEELIDLLGCVDHEVAKK 68
Query: 413 LFKRLK 430
+F LK
Sbjct: 69 IFSVLK 74
>UniRef50_P48504 Cluster: Ubiquinol-cytochrome c reductase complex
7.8 kDa protein; n=9; Magnoliophyta|Rep:
Ubiquinol-cytochrome c reductase complex 7.8 kDa protein
- Solanum tuberosum (Potato)
Length = 69
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = +2
Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 412
+VDP+ +L C KP +YQ C RV + C + DY H +DKCV
Sbjct: 6 VVDPKATLEVSC--KPKCVRQLKEYQACTKRVEGDESGHKHCTGQYFDYWHCIDKCVAAK 63
Query: 413 LFKRLK 430
LF LK
Sbjct: 64 LFDHLK 69
>UniRef50_Q27345 Cluster: Filarial common antigen protein; n=1;
Dirofilaria immitis|Rep: Filarial common antigen protein
- Dirofilaria immitis (Canine heartworm)
Length = 125
Score = 46.8 bits (106), Expect = 8e-04
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 233 LVDPQQSLREECSQKPDAQNMWAK--YQECNDRVNSRSKTAETCEEELIDYVHVLDKCVT 406
+VD REEC + W K + E RVNS+ T E+C E++DY+ LD C
Sbjct: 20 VVDALIKFREECIAQT---GKWKKICWDEVYGRVNSKISTKESCHYEMVDYIQALDHCAM 76
Query: 407 KDLFKRLK 430
+F LK
Sbjct: 77 PKVFATLK 84
>UniRef50_Q0UPH2 Cluster: Predicted protein; n=5;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 153
Score = 44.8 bits (101), Expect = 0.003
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +2
Query: 239 DPQQSLREECSQKPDAQNMWAKYQECNDRVNSR----SKTAETCEEELIDYVHVLDKCVT 406
DP+++L +EC++ + Y EC +RV + K +E C EE H +C
Sbjct: 86 DPKETLEKECAESKECHPAKHHYDECVERVTGQIENDGKASEDCVEEFFHLAHCATQCAA 145
Query: 407 KDLFKRLK 430
LF +LK
Sbjct: 146 PKLFAQLK 153
>UniRef50_Q53PN7 Cluster: Ubiquinol--cytochrome-c reductase,
putative; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Ubiquinol--cytochrome-c reductase,
putative - Oryza sativa subsp. japonica (Rice)
Length = 96
Score = 43.6 bits (98), Expect = 0.007
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = +2
Query: 236 VDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKDL 415
VDP++ L E C KP +Y++C RV + C + DY +DKCV L
Sbjct: 34 VDPKKYLEERC--KPQCVKPLYEYEKCVKRVEKDDTGHKHCTGQYFDYWSCIDKCVAPKL 91
Query: 416 FKRLK 430
++LK
Sbjct: 92 LEKLK 96
>UniRef50_Q7S035 Cluster: Predicted protein; n=6;
Pezizomycotina|Rep: Predicted protein - Neurospora
crassa
Length = 141
Score = 43.6 bits (98), Expect = 0.007
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRV-NSRSKTAETCEEELIDYVHVLDKCVTK 409
+VDP+++L EEC + Y EC RV + + E C EE VH +C
Sbjct: 75 IVDPKETLEEECRNSKECAPAKHHYDECAARVTGAGADNKEDCVEEFFHLVHCATQCAAP 134
Query: 410 DLFKRLK 430
L+ LK
Sbjct: 135 KLWNTLK 141
>UniRef50_Q75AP4 Cluster: ADL124Cp; n=2; Saccharomycetaceae|Rep:
ADL124Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 126
Score = 41.5 bits (93), Expect = 0.029
Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Frame = +2
Query: 239 DPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKT--------AETCEEELIDYVHVLD 394
D LREEC DA+ + Y EC +RV + E C EE H LD
Sbjct: 55 DQLDELREECRNAADAKPLVHHYMECVERVQHAQQQPGYADLDYQEDCVEEFFHLQHHLD 114
Query: 395 KCVTKDLFKRLK 430
C LF +LK
Sbjct: 115 SCAAPKLFDKLK 126
>UniRef50_Q6BS30 Cluster: Debaryomyces hansenii chromosome D of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
D of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 138
Score = 41.5 bits (93), Expect = 0.029
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +2
Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKT--------AETCEEELIDYVHV 388
+VDP +LREEC+ + ++EC +RV + E C EE H
Sbjct: 65 IVDPLDTLREECTNTETCKPHLHHFEECIERVTKEQQEEGYEHKLYKEDCVEEFFHLQHC 124
Query: 389 LDKCVTKDLFKRLK 430
++ CV LF +LK
Sbjct: 125 VNDCVAPRLFNKLK 138
>UniRef50_O42932 Cluster: Ubiquinol-cytochrome-c reductase complex
subunit 8; n=1; Schizosaccharomyces pombe|Rep:
Ubiquinol-cytochrome-c reductase complex subunit 8 -
Schizosaccharomyces pombe (Fission yeast)
Length = 214
Score = 40.3 bits (90), Expect = 0.068
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +2
Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSR---SKTAETCEEELIDYVHVLDKCV 403
+ DP + + +EC PD + + ++EC RV + +E C EE H C
Sbjct: 146 ITDPLEKMTQECMDAPDCKEVKHHFEECTARVTKKVEQGDKSEDCIEEFFHLYHCARDCA 205
Query: 404 TKDLFKRL 427
+FK L
Sbjct: 206 DPKVFKVL 213
>UniRef50_Q9XI58 Cluster: F9L1.5 protein; n=2; core
eudicotyledons|Rep: F9L1.5 protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 101
Score = 39.5 bits (88), Expect = 0.12
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVT 406
+VDP++ L E C KP +YQ C R+ + C + DY +DKCV+
Sbjct: 19 VVDPKKYLEESC--KPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWQCIDKCVS 74
>UniRef50_Q9D2Q7 Cluster: Adult male tongue cDNA, RIKEN full-length
enriched library, clone:2310021J10 product:weakly
similar to UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 11
kDa PROTEIN, MITOCHONDRIAL; n=2; Mus musculus|Rep: Adult
male tongue cDNA, RIKEN full-length enriched library,
clone:2310021J10 product:weakly similar to
UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 11 kDa PROTEIN,
MITOCHONDRIAL - Mus musculus (Mouse)
Length = 54
Score = 38.7 bits (86), Expect = 0.21
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +2
Query: 344 TAETCEEELIDYVHVLDKCVTKDLFKRLK 430
T E C EEL D++H D CV LFK LK
Sbjct: 26 TEEDCTEELFDFLHARDHCVAHKLFKNLK 54
>UniRef50_Q4PG23 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 132
Score = 38.3 bits (85), Expect = 0.27
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 239 DPQQSLREECSQKPDAQNMWAKYQECNDRV-NSRSKTAETCEEELIDYVHVLDKCVTKDL 415
DP ++ EEC + + + EC+ RV + E C EE H +C L
Sbjct: 68 DPAPAIYEECEKSKSCAPLKHHFDECSKRVEEGKGFEGENCIEEFFHLAHCAQECTAPKL 127
Query: 416 FKRL 427
F +L
Sbjct: 128 FAKL 131
>UniRef50_Q5KF04 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 191
Score = 37.5 bits (83), Expect = 0.48
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 239 DPQQSLREECSQKPDAQNMWAKYQECNDRVNS-RSKTAETCEEELIDYVHVLDKCVTKDL 415
D ++REEC + A+++ + C ++V + E C EE +H +D C +
Sbjct: 128 DIAPAIREECEKNACAEHVH-HFAHCQEKVEAGEGFPGEDCVEEFFHILHCVDACAAPKI 186
Query: 416 FKRL 427
FK+L
Sbjct: 187 FKKL 190
>UniRef50_A5K0Y0 Cluster: Ubiquinol-cytochrome c reductase hinge
protein, putative; n=5; Plasmodium|Rep:
Ubiquinol-cytochrome c reductase hinge protein, putative
- Plasmodium vivax
Length = 88
Score = 35.9 bits (79), Expect = 1.5
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +2
Query: 236 VDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKDL 415
VDP+ L ++C K +YQ C RV ++ + C + + +D CV KDL
Sbjct: 26 VDPRIELEKKCQAK--CVRPVNEYQSCVSRVQAKPEMKGNCLGQHEEMYMCIDHCVAKDL 83
Query: 416 FKRL 427
F L
Sbjct: 84 FNYL 87
>UniRef50_A2X5T8 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 167
Score = 35.5 bits (78), Expect = 1.9
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 239 DPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKDLF 418
DP+ L + K Q W +YQ+C R+ + C + DY +DK V + LF
Sbjct: 106 DPKALLEDRSKAKCVYQ--WYEYQKCVKRIEDDETGQKHCTGQYFDYWKCVDKNVAEKLF 163
Query: 419 KRLK 430
LK
Sbjct: 164 DSLK 167
>UniRef50_A0DUX9 Cluster: Chromosome undetermined scaffold_65, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_65,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 343
Score = 33.9 bits (74), Expect = 5.9
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 248 QSLREECSQKPDAQNMWAKYQECN---DRVNSRSKTAETCEEELIDYVHVLDKC 400
Q+ EC Q ++ AK Q+CN +++ KT + ++ +I Y+ +L KC
Sbjct: 66 QNCNGECDQYEQVDSLQAKLQKCNFLINKIKKMLKTYSSDQQYIIQYLQMLWKC 119
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,551,699
Number of Sequences: 1657284
Number of extensions: 8082080
Number of successful extensions: 18204
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 17642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18192
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84441173866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -