Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G05
         (920 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT007070-1|AAP35733.1|   91|Homo sapiens ubiquinol-cytochrome c ...    64   5e-10
BC107703-1|AAI07704.1|   91|Homo sapiens ubiquinol-cytochrome c ...    64   5e-10
BC015177-1|AAH15177.1|   91|Homo sapiens ubiquinol-cytochrome c ...    64   5e-10
BC001934-1|AAH01934.1|   91|Homo sapiens ubiquinol-cytochrome c ...    64   5e-10
BC001426-1|AAH01426.1|   91|Homo sapiens ubiquinol-cytochrome c ...    64   5e-10
AL122001-4|CAI21963.1|   91|Homo sapiens ubiquinol-cytochrome c ...    64   5e-10
Y00764-1|CAA68733.1|   91|Homo sapiens protein ( Human mRNA for ...    62   4e-09
M36647-1|AAA36317.1|   91|Homo sapiens protein ( Homo sapiens mi...    62   4e-09
BC093060-1|AAH93060.1|   85|Homo sapiens UQCRH protein protein.        62   4e-09
Y08406-1|CAA69682.1|  121|Homo sapiens immunoglobulin protein.         31   7.8  

>BT007070-1|AAP35733.1|   91|Homo sapiens ubiquinol-cytochrome c
           reductase hinge protein protein.
          Length = 91

 Score = 64.5 bits (150), Expect = 5e-10
 Identities = 29/66 (43%), Positives = 39/66 (59%)
 Frame = +2

Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 412
           LVDP  ++RE+C Q         + + C++RV+SRS T E C EEL D++H  D CV   
Sbjct: 26  LVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSHTEEDCTEELFDFLHARDHCVAHK 85

Query: 413 LFKRLK 430
           LF  LK
Sbjct: 86  LFNNLK 91


>BC107703-1|AAI07704.1|   91|Homo sapiens ubiquinol-cytochrome c
           reductase hinge protein protein.
          Length = 91

 Score = 64.5 bits (150), Expect = 5e-10
 Identities = 29/66 (43%), Positives = 39/66 (59%)
 Frame = +2

Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 412
           LVDP  ++RE+C Q         + + C++RV+SRS T E C EEL D++H  D CV   
Sbjct: 26  LVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSHTEEDCTEELFDFLHARDHCVAHK 85

Query: 413 LFKRLK 430
           LF  LK
Sbjct: 86  LFNNLK 91


>BC015177-1|AAH15177.1|   91|Homo sapiens ubiquinol-cytochrome c
           reductase hinge protein protein.
          Length = 91

 Score = 64.5 bits (150), Expect = 5e-10
 Identities = 29/66 (43%), Positives = 39/66 (59%)
 Frame = +2

Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 412
           LVDP  ++RE+C Q         + + C++RV+SRS T E C EEL D++H  D CV   
Sbjct: 26  LVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSHTEEDCTEELFDFLHARDHCVAHK 85

Query: 413 LFKRLK 430
           LF  LK
Sbjct: 86  LFNNLK 91


>BC001934-1|AAH01934.1|   91|Homo sapiens ubiquinol-cytochrome c
           reductase hinge protein protein.
          Length = 91

 Score = 64.5 bits (150), Expect = 5e-10
 Identities = 29/66 (43%), Positives = 39/66 (59%)
 Frame = +2

Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 412
           LVDP  ++RE+C Q         + + C++RV+SRS T E C EEL D++H  D CV   
Sbjct: 26  LVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSHTEEDCTEELFDFLHARDHCVAHK 85

Query: 413 LFKRLK 430
           LF  LK
Sbjct: 86  LFNNLK 91


>BC001426-1|AAH01426.1|   91|Homo sapiens ubiquinol-cytochrome c
           reductase hinge protein protein.
          Length = 91

 Score = 64.5 bits (150), Expect = 5e-10
 Identities = 29/66 (43%), Positives = 39/66 (59%)
 Frame = +2

Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 412
           LVDP  ++RE+C Q         + + C++RV+SRS T E C EEL D++H  D CV   
Sbjct: 26  LVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSHTEEDCTEELFDFLHARDHCVAHK 85

Query: 413 LFKRLK 430
           LF  LK
Sbjct: 86  LFNNLK 91


>AL122001-4|CAI21963.1|   91|Homo sapiens ubiquinol-cytochrome c
           reductase hinge protein protein.
          Length = 91

 Score = 64.5 bits (150), Expect = 5e-10
 Identities = 29/66 (43%), Positives = 39/66 (59%)
 Frame = +2

Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 412
           LVDP  ++RE+C Q         + + C++RV+SRS T E C EEL D++H  D CV   
Sbjct: 26  LVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSHTEEDCTEELFDFLHARDHCVAHK 85

Query: 413 LFKRLK 430
           LF  LK
Sbjct: 86  LFNNLK 91


>Y00764-1|CAA68733.1|   91|Homo sapiens protein ( Human mRNA for
           mitochondrial hinge protein. ).
          Length = 91

 Score = 61.7 bits (143), Expect = 4e-09
 Identities = 28/66 (42%), Positives = 38/66 (57%)
 Frame = +2

Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 412
           LVDP  ++RE+C Q         + + C++R +SRS T E C EEL D++H  D CV   
Sbjct: 26  LVDPLTTVREQCEQLEKCVKARERLELCDERDSSRSHTEEDCTEELFDFLHARDHCVAHK 85

Query: 413 LFKRLK 430
           LF  LK
Sbjct: 86  LFNNLK 91


>M36647-1|AAA36317.1|   91|Homo sapiens protein ( Homo sapiens
           mitochondrial hinge protein precursor, mRNA, complete
           cds. ).
          Length = 91

 Score = 61.7 bits (143), Expect = 4e-09
 Identities = 28/66 (42%), Positives = 38/66 (57%)
 Frame = +2

Query: 233 LVDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKD 412
           LVDP  ++RE+C Q         + + C++R +SRS T E C EEL D++H  D CV   
Sbjct: 26  LVDPLTTVREQCEQLEKCVKARERLELCDERDSSRSHTEEDCTEELFDFLHARDHCVAHK 85

Query: 413 LFKRLK 430
           LF  LK
Sbjct: 86  LFNNLK 91


>BC093060-1|AAH93060.1|   85|Homo sapiens UQCRH protein protein.
          Length = 85

 Score = 61.7 bits (143), Expect = 4e-09
 Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = +2

Query: 179 MSDKFVPVVKXXXXXXXXL-VDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAET 355
           M D+ +P +            DP  ++RE+C Q         + + C++RV+SRS T E 
Sbjct: 1   MGDRILPFLAAVWLCQLAFCTDPLTTVREQCEQLEKCVKARERLELCDERVSSRSHTEED 60

Query: 356 CEEELIDYVHVLDKCVTKDLFKRLK 430
           C EEL D++H  D CV   LF  LK
Sbjct: 61  CTEELFDFLHARDHCVAHKLFNNLK 85


>Y08406-1|CAA69682.1|  121|Homo sapiens immunoglobulin protein.
          Length = 121

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 578 NYLYLQINSNNIGDSHILYINKFTKTTRPIKLRMW 474
           N LYLQ+NS  + D+ I Y  K +    P  L +W
Sbjct: 77  NTLYLQMNSLRVEDTAIYYCAKVSGVVAPAALDVW 111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,935,652
Number of Sequences: 237096
Number of extensions: 1348701
Number of successful extensions: 11281
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11281
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)